prot_L-elsbetiae_contig5489.13751.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5489.13751.1
Unique Nameprot_L-elsbetiae_contig5489.13751.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length307
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5489.13751.1 vs. uniprot
Match: D7FYW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW7_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 1.060e-95
Identity = 191/284 (67.25%), Postives = 221/284 (77.82%), Query Frame = 0 
Query:    1 MRRVNTLEEDSSKLAEDNAELRLDRDRLLRVVRRHKEAGRADSVAAHRDRIRKRNMSEKEVNRCDLASAKLELKAMGQENNRLLSKARRQAGRIRELEDNAGVLTATLSQAEQELDVVRKEKADVQRESDEATASERRAKSDMEHEALLRLEAIERVNSARTAEGEAREARASAEMLAESLRIQLAKTAEKLEAKDSARARHQGSVARYQNMIDAQALALQTVRQQLLGEKVRRQESERQARLRHIAAIDSKSRAFASTTTGAAGARAGGTK---GSPTARRTA 281
            MRRV TLEE++SKLA DNA+LRLDR+RLL VVRR+K+AGR +SVAAHRDR+RKR+MSEKEVNRCDLASAKL LKAMGQEN RLLSKA+ QA RIRELE+   VL   LS+ E EL+    +K  VQ+ESD+A A E+RAKSDMEHEALLRL+A+E+ +SA              E + E+LR++L  T +KLEAKDSARARHQGSV RYQ MID+QA+ALQ  R+QLLGEKVRRQESERQARLRHIAAIDSKSRA       AAGA A  T+    SPTARR A
Sbjct:  121 MRRVKTLEEENSKLAADNADLRLDRERLLGVVRRYKDAGRKESVAAHRDRLRKRHMSEKEVNRCDLASAKLGLKAMGQENKRLLSKAKGQASRIRELENGTEVLAKKLSELEHELECAINQKDAVQQESDKALAQEQRAKSDMEHEALLRLQAVEQASSASRXXXXXXXXXXXXEAVIETLRVKLESTVKKLEAKDSARARHQGSVVRYQKMIDSQAMALQAAREQLLGEKVRRQESERQARLRHIAAIDSKSRA-------AAGAGATSTRRPASSPTARRPA 397
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5489.13751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYW7_ECTSI1.060e-9567.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..135
NoneNo IPR availableCOILSCoilCoilcoord: 4..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5489contigL-elsbetiae_contig5489:3357..8764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5489.13751.1mRNA_L-elsbetiae_contig5489.13751.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5489 1968..9159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5489.13751.1 ID=prot_L-elsbetiae_contig5489.13751.1|Name=mRNA_L-elsbetiae_contig5489.13751.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp
MRRVNTLEEDSSKLAEDNAELRLDRDRLLRVVRRHKEAGRADSVAAHRDR
IRKRNMSEKEVNRCDLASAKLELKAMGQENNRLLSKARRQAGRIRELEDN
AGVLTATLSQAEQELDVVRKEKADVQRESDEATASERRAKSDMEHEALLR
LEAIERVNSARTAEGEAREARASAEMLAESLRIQLAKTAEKLEAKDSARA
RHQGSVARYQNMIDAQALALQTVRQQLLGEKVRRQESERQARLRHIAAID
SKSRAFASTTTGAAGARAGGTKGSPTARRTATRSTSASSGKRTAAAAAAA
ARVRGS*
back to top