mRNA_L-elsbetiae_contig544.13684.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig544.13684.1
Unique NamemRNA_L-elsbetiae_contig544.13684.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig544.13684.1 vs. uniprot
Match: A0A6H5KKY5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKY5_9PHAE)

HSP 1 Score: 884 bits (2285), Expect = 5.000e-294
Identity = 650/1316 (49.39%), Postives = 761/1316 (57.83%), Query Frame = 1 
Query:  448 IFIPPVVGVASEALEEAMRRSAPADGSLEGERRNRLVGVNAVIELLQQVSGYPGTTT--GIVNFDAVADAARGVMVRTPSP---PTVPRNGVMAGTPANEPSLQGEDAVASPSSRSRSSSVSSSDEAVI--EL-PRVARGRGGMRSSTTSNYSTQQQ--------------------------------------APSSAGSGXXXXXXXSAAGN----SDVSATSATRRGRVIKKPLRLEQQDLGRQTLAGRSGRADAPSKLAARAAVVGQPQPGAA----------GGGVAELSSANGKAGSQASGKGRAAVEVPAAASVRGAERCVARLGTAANGGDCCVETGTRNVLQGAGSSNSEGGVATDEGSSSAGAALSSSAAGSAVRMVLPLERRTAELAPQG-DAEEAGGDGSPAGESSKKGKGPVRERDRMVVPDPPPERPIGGLGPAPEDTIKEYKRAFDDVVWPALAEEFGWTKAYGPRMNDVYFLPTGVVRGQNGARCRIDYYDSNRQVLLHMVEHEENYARLLEKAWAAAVLKPRALGRKGGAXXXXXXXXXXXXXXXXKSTMMKKEYPKKVSLVGPAYQVDPLNLPIPVSSEDYAPPEDVEFEQVWDPSVMLPSSEGAAAPPDPGVLVEEFKGAVSHDKCLEIIYRCGGDHGDARKMLTNLLRSWRARYKTAGVSAKEAAAAKAIVTKETAARLAKAPLPPSASATSGSSRKSGKAVANGGTCPIVEGSTTVTATTTRSAVAWGSGAAAVASRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGRSQGARAGADVVQDDFWCRPLEYLAGGEAALKRQVEGGVSSLPPGARSRDKLSTDLNLSRPWTPTDAERFTRALLEEGSKNFYAVQQKALPERQVCELVDRYYGGWKQTDGYKKLKESISLSKKQSACGKCHAGGDLICCDGCDAVYHPECVGISVVPEGDWFCPACGSAKKNEIQKPAGGA----------------ALLPGAVLGQPGAKPAVAGANDEVPASAGKGKRTXXXXXXXXXXXXXXXXXXXXPRAVVGAKGGVXXXXXXXXXXXXXRGGD-------------GGQPRPPSHMRMERVPIQLGSARSSPSGVAGVPQKVSSEASGLAPAGLPAIATAASPASQHAEKDTRASNQLGKRVHVAQAP--EQHSGKRAA--------------------KAAKATVAR---STAGGSLTPGARSVRSEVLTDQ------------AEGEWDCLCCDRRNRVEDKRCRQCEGLRLFGVAVN-----------PDVAPTSASAPSTAAXXXXXXAPTS 3981
            +F PP VG ASEALEEAMRR+APADGSL+ ER +RLVGV +VIELLQQV+GYPG TT  GI+NFDAVA AARGV+VRTPSP    +  R     G  A   + +G   V + S RSRSSS+SSSDEAV+  EL P      GG++SS    +   +                                       A SS G         SAA      + VS  +ATR GRVIKKP+RLE +  GRQ+LAGR+GRADAP+K+A                        G   A  S ANGKA SQA        E  A    +GA+RCVARLGTAA G +  V+ G + VL   G+    G VA++  S +A  A SS AA S V M LP + RTA    +G DA+E GGDG   G+SS++ +  VRERDRMV+PDPPP+RP+G LGP PED IKEYKRAFDDVVWP LA+EFGW +  GPR +DVY+LP GVVRGQNGA+CR+DY+DSNRQVL+HM E EE +  LLE+AWA A+ KPR LGRKG  XXXXXXXXX       KSTMMKKEYPKKVSLVG A+QVDPLNLP+PVSSEDY PPEDV FEQVWDPSV++PS +G  AP +   LV+EF G VSHDKCLEI++R  GD+G+ARK+L NL RSW++RY  A  S +E A+AKAIV +ETAARLA                                                            XXXXXXXXXXXXXXXXXXXXXXXXXXX  RGGR    RAGA   QD FWCRPL+ LAGGE+ALKRQV+GGVSS+PPGARS+DKLS DLNL+RPW P +A  +TRA+LEEGSKNFYA Q KALP RQVCELVDRYYGGWKQTDGY+ LKESI LSKKQSACG CHAGGDLICCDGC+AVYHPECVG+SVVPEGDWFCPAC   +K E ++P G A                A L GA  G+     AVA    E   +AG+ KR                      R +   KG                G D             G  P     MRMERVPIQLG AR +  G A V + VSS A G A       A+   P ++ +    R+    GKR  V + P   QH GKR A                    KAA  T+A    S+AGG+    A +   +    +            A G+W CL C  RNR ED RCR+CEGLRL G  +N           P  AP S  AP+T +       PTS
Sbjct:   39 VFFPPPVGEASEALEEAMRRAAPADGSLDEERPDRLVGVTSVIELLQQVAGYPGPTTSLGIINFDAVAAAARGVLVRTPSPLKSGSGRREATAMGVAAGACAAEGNTPVMA-SLRSRSSSISSSDEAVVREELQPWPVTTGGGVQSSAAETHPPAENTDLQHKAQPSIDPGSVGPAAAGPAPSQLLSALALSFSSAMSSRGGATAPEGSMSAAXXXXXXAGVSTAAATRLGRVIKKPVRLEHEQPGRQSLAGRNGRADAPAKVAXXXXXXXXXXXXXXXXXXXXXXXXGESAAGFSCANGKADSQARDVNITGGETTATG--KGAKRCVARLGTAA-GSEGVVDPGDQIVLLSTGN----GSVASNA-SGTASDASSSPAASSVVSMALPADVRTAGAPLRGRDADETGGDGG--GDSSRRSRDSVRERDRMVLPDPPPKRPVGELGPLPEDAIKEYKRAFDDVVWPGLAQEFGWKRVRGPRPSDVYYLPPGVVRGQNGAKCRVDYFDSNRQVLIHMAEREEKFGDLLERAWAEAIAKPRLLGRKGXXXXXXXXXXXWTELPRRKSTMMKKEYPKKVSLVGTAHQVDPLNLPVPVSSEDYVPPEDVLFEQVWDPSVVVPSPKGKGAPRELAELVKEFAGVVSHDKCLEIVHRFEGDYGEARKLLRNLSRSWKSRYLMASNSTRETASAKAIVARETAARLA----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRGGRGHVGRAGAPGTQDAFWCRPLKSLAGGESALKRQVQGGVSSIPPGARSKDKLSPDLNLARPWLPHEAAMYTRAMLEEGSKNFYAAQ-KALPGRQVCELVDRYYGGWKQTDGYRALKESIRLSKKQSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPACVIRRKKEAERPLGQASSXXXXXXAWTVGGSSARLAGAASGRARVDSAVAATKRE--NTAGRSKRYSTMTATVTAASVAYVASSKKARTLAKDKGAERGDGSSGGGRAEVGGRDTSVGTETSRVIAGGVGPPXXXXMRMERVPIQLGIARGAVGGAARVAELVSSAAGGAA---ATVSASVCPPGAETSTACGRSGAAFGKRPIVGETPMHTQHPGKRPARLVKTAAAAASARSAEDSPVKAAPLTIAPRPLSSAGGTTAGPAGAQLGQAAAFKGTXXXXXXXXXXAAGDWGCLGCKHRNRAEDTRCRRCEGLRLVGAEINLKGVPRQSEAPPAAAPLSGKAPATVSVPIAAAEPTS 1321
[Close]
BLAST of mRNA_L-elsbetiae_contig544.13684.1 vs. uniprot
Match: A0A7S4D894_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D894_HETAK)

HSP 1 Score: 95.1 bits (235), Expect = 9.260e-19
Identity = 50/122 (40.98%), Postives = 70/122 (57.38%), Query Frame = 1 
Query: 2800 STDLNLSRPWTPTDAERFTRALLEEGSKNFYAVQQKALP---ERQVCELVDRYYGGWKQTDGYKKLKESISLSKK--QSACGKCHAGGDLICCDGCDAVYHPECVG--ISVVPEGDWFCPAC 3144
            S  L   RPW   +A  F RA  E   K+ + V++       ER + EL+D YY  +K+T+ YK LK+ +   ++     C  C+ GGDLICC+ CD VYH EC+   +S +PEGDW+CP C
Sbjct:    9 SGTLKRPRPWRDAEAAAFERACAEH-LKDLHRVRRAMSAAGFERSISELMDYYYNKFKKTERYKILKKELIKFRELNNDHCAICNDGGDLICCEACDDVYHMECLDPPLSALPEGDWYCPTC 129
[Close]
BLAST of mRNA_L-elsbetiae_contig544.13684.1 vs. uniprot
Match: A0A7S0J6R7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J6R7_9EUKA)

HSP 1 Score: 73.9 bits (180), Expect = 8.200e-11
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 1 
Query: 2926 VCELVDRYYGGWKQTDGYKKLKESISLSKK-----QSACGKCHAGGDLICCDGCDAVYHPECVGISVVPEGDWFCPACGSAKKNEIQ 3171
            + EL+  +Y  ++Q+  Y+KL +++   ++        C  C A G LICC+ C A +H  CVG+SVVPEG+W C AC S K+   Q
Sbjct:  128 IGELLQFFYAQFRQSTEYRKLSQAMKAQREVEDGFDDYCSVCGALGFLICCEWCSAAFHLNCVGLSVVPEGEWKCQACISGKRPRQQ 214
[Close]
BLAST of mRNA_L-elsbetiae_contig544.13684.1 vs. uniprot
Match: A0A7S2Z164_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z164_9CHLO)

HSP 1 Score: 73.6 bits (179), Expect = 1.220e-10
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 1 
Query: 2998 ISLSKKQSACGKCHAGGDLICCDGCDAVYHPECVGISVVPEGDWFCPAC 3144
            +SL      C  C  GG+LICC+GC A +H ECVG+  +PEGDWFCP C
Sbjct:   48 LSLDWNDDLCRICSDGGELICCEGCPASFHKECVGLDAIPEGDWFCPTC 96
[Close]
BLAST of mRNA_L-elsbetiae_contig544.13684.1 vs. uniprot
Match: A0A3Q7HXM3_SOLLC (Uncharacterized protein n=6 Tax=Solanum subgen. Lycopersicon TaxID=49274 RepID=A0A3Q7HXM3_SOLLC)

HSP 1 Score: 77.0 bits (188), Expect = 2.930e-10
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 1 
Query: 2989 KESISLSKKQSACGKCHAGGDLICCDGCDAVYHPECVGISVVPEGDWFCPAC 3144
            KES   ++    C  CH GGDLI CDGC + +HP+C+GI  VP GDWFCP+C
Sbjct: 1210 KESSHFTENDYICSVCHYGGDLILCDGCPSSFHPDCLGIKEVPNGDWFCPSC 1261
[Close]
BLAST of mRNA_L-elsbetiae_contig544.13684.1 vs. uniprot
Match: A0A1U8H9B1_CAPAN (uncharacterized protein LOC107875466 isoform X1 n=6 Tax=Capsicum TaxID=4071 RepID=A0A1U8H9B1_CAPAN)

HSP 1 Score: 76.3 bits (186), Expect = 4.750e-10
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 1 
Query: 2986 LKESISLSKKQSAC--------GKCHAGGDLICCDGCDAVYHPECVGISVVPEGDWFCPAC 3144
            +K+ +S+  K+ +C          CH GGDLI CDGC + +HP+C+GI  VP+GDWFCP+C
Sbjct: 1088 MKDELSVQNKEDSCFTTNDYICSVCHYGGDLILCDGCPSSFHPDCLGIKEVPDGDWFCPSC 1148
[Close]
BLAST of mRNA_L-elsbetiae_contig544.13684.1 vs. uniprot
Match: A0A383V592_TETOB (PHD-type domain-containing protein (Fragment) n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V592_TETOB)

HSP 1 Score: 75.5 bits (184), Expect = 6.890e-10
Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 1 
Query: 2986 LKESISLSKKQSACGKCHAGGDLICCDGCDAVYHPECVGISVVPEGDWFCPACGSAKKN 3162
            L  S  +    S C +C  GG+L+CCDGC A YHP C+G+++VP+G WFCP+C  A ++
Sbjct:  743 LVNSTYMDSHISYCVQCKDGGELLCCDGCPAAYHPTCLGLTIVPDGSWFCPSCVQAGRD 801
[Close]
BLAST of mRNA_L-elsbetiae_contig544.13684.1 vs. uniprot
Match: A0A7J7QBX4_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QBX4_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 8.840e-10
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 1 
Query: 3019 SACGKCHAGGDLICCDGCDAVYHPECVGISVVPEGDWFCPACGSAKKN 3162
            S C +C  GGDL+CCDGC A YHP C+G+ +VP+G WFCP+C  A ++
Sbjct:    6 SYCVQCRDGGDLMCCDGCPAAYHPACLGLGIVPDGPWFCPSCVQAGRD 53
[Close]
BLAST of mRNA_L-elsbetiae_contig544.13684.1 vs. uniprot
Match: A0A7S3FQN8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FQN8_9CHLO)

HSP 1 Score: 72.8 bits (177), Expect = 1.820e-9
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 1 
Query: 2998 ISLSKKQSACGKCHAGGDLICCDGCDAVYHPECVGISVVPEGDWFCPAC 3144
            ++L      C  C  GG+LICC+GC   +H ECVG++ +PEGDWFCPAC
Sbjct:  283 MTLDWNDDLCRVCSDGGELICCEGCPGAFHKECVGLTEIPEGDWFCPAC 331
[Close]
BLAST of mRNA_L-elsbetiae_contig544.13684.1 vs. uniprot
Match: A0A7J6WIR1_THATH (Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WIR1_THATH)

HSP 1 Score: 71.6 bits (174), Expect = 2.060e-9
Identity = 26/56 (46.43%), Postives = 34/56 (60.71%), Query Frame = 1 
Query: 2977 YKKLKESISLSKKQSACGKCHAGGDLICCDGCDAVYHPECVGISVVPEGDWFCPAC 3144
            Y  +++     +    CG C  GG LICCDGC + YH  C+GI V+P GDW CP+C
Sbjct:  222 YHVIEDDSETDQNDDTCGTCGDGGVLICCDGCPSTYHQSCMGIEVLPAGDWICPSC 277
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig544.13684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKY5_9PHAE5.000e-29449.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4D894_HETAK9.260e-1940.98Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0J6R7_9EUKA8.200e-1139.08Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S2Z164_9CHLO1.220e-1055.10Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A3Q7HXM3_SOLLC2.930e-1055.77Uncharacterized protein n=6 Tax=Solanum subgen. Ly... [more]
A0A1U8H9B1_CAPAN4.750e-1047.54uncharacterized protein LOC107875466 isoform X1 n=... [more]
A0A383V592_TETOB6.890e-1047.46PHD-type domain-containing protein (Fragment) n=1 ... [more]
A0A7J7QBX4_9CHLO8.840e-1056.25Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
A0A7S3FQN8_9CHLO1.820e-953.06Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A7J6WIR1_THATH2.060e-946.43Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig544contigL-elsbetiae_contig544:21326..30478 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score733.4
Seed ortholog evalue2e-208
Seed eggNOG ortholog2880.D7FN55
Hectar predicted targeting categoryother localisation
GOsGO:0000785,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006333,GO:0006338,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031491,GO:0034728,GO:0035327,GO:0042623,GO:0042766,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043933,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0044877,GO:0051276,GO:0070615,GO:0071824,GO:0071840,GO:0097159,GO:1901363
EggNOG free text desc.TPL-binding domain in jasmonate signalling
EggNOG OGs2D07F@1,2SD3A@2759
Ec32 ortholog descriptionPHD-type zinc finger protein
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionRING/FYVE/PHD-type zinc finger protein
Ec32 orthologEc-06_008460.1
Exons11
Model size4191
Cds size4191
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816569.6422098-CDS-L-elsbetiae_contig544:21325..213661622816569.6422098-CDS-L-elsbetiae_contig544:21325..21366Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 21326..21366 +
1691683654.2332473-CDS-L-elsbetiae_contig544:21325..213661691683654.2332473-CDS-L-elsbetiae_contig544:21325..21366Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 21326..21366 +
1622816569.6521466-CDS-L-elsbetiae_contig544:21878..225691622816569.6521466-CDS-L-elsbetiae_contig544:21878..22569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 21879..22569 +
1691683654.2439272-CDS-L-elsbetiae_contig544:21878..225691691683654.2439272-CDS-L-elsbetiae_contig544:21878..22569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 21879..22569 +
1622816569.6659615-CDS-L-elsbetiae_contig544:23556..244771622816569.6659615-CDS-L-elsbetiae_contig544:23556..24477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 23557..24477 +
1691683654.2523823-CDS-L-elsbetiae_contig544:23556..244771691683654.2523823-CDS-L-elsbetiae_contig544:23556..24477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 23557..24477 +
1622816569.67827-CDS-L-elsbetiae_contig544:24982..251291622816569.67827-CDS-L-elsbetiae_contig544:24982..25129Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 24983..25129 +
1691683654.2665725-CDS-L-elsbetiae_contig544:24982..251291691683654.2665725-CDS-L-elsbetiae_contig544:24982..25129Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 24983..25129 +
1622816569.6918056-CDS-L-elsbetiae_contig544:25520..256731622816569.6918056-CDS-L-elsbetiae_contig544:25520..25673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 25521..25673 +
1691683654.275406-CDS-L-elsbetiae_contig544:25520..256731691683654.275406-CDS-L-elsbetiae_contig544:25520..25673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 25521..25673 +
1622816569.7089744-CDS-L-elsbetiae_contig544:26420..264861622816569.7089744-CDS-L-elsbetiae_contig544:26420..26486Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 26421..26486 +
1691683654.286989-CDS-L-elsbetiae_contig544:26420..264861691683654.286989-CDS-L-elsbetiae_contig544:26420..26486Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 26421..26486 +
1622816569.7206244-CDS-L-elsbetiae_contig544:26834..270141622816569.7206244-CDS-L-elsbetiae_contig544:26834..27014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 26835..27014 +
1691683654.2953775-CDS-L-elsbetiae_contig544:26834..270141691683654.2953775-CDS-L-elsbetiae_contig544:26834..27014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 26835..27014 +
1622816569.7311707-CDS-L-elsbetiae_contig544:27203..279051622816569.7311707-CDS-L-elsbetiae_contig544:27203..27905Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 27204..27905 +
1691683654.3044047-CDS-L-elsbetiae_contig544:27203..279051691683654.3044047-CDS-L-elsbetiae_contig544:27203..27905Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 27204..27905 +
1622816569.742605-CDS-L-elsbetiae_contig544:28379..284801622816569.742605-CDS-L-elsbetiae_contig544:28379..28480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 28380..28480 +
1691683654.3136268-CDS-L-elsbetiae_contig544:28379..284801691683654.3136268-CDS-L-elsbetiae_contig544:28379..28480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 28380..28480 +
1622816569.7566118-CDS-L-elsbetiae_contig544:28917..289361622816569.7566118-CDS-L-elsbetiae_contig544:28917..28936Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 28918..28936 +
1691683654.3242295-CDS-L-elsbetiae_contig544:28917..289361691683654.3242295-CDS-L-elsbetiae_contig544:28917..28936Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 28918..28936 +
1622816569.7672577-CDS-L-elsbetiae_contig544:29308..304781622816569.7672577-CDS-L-elsbetiae_contig544:29308..30478Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 29309..30478 +
1691683654.339383-CDS-L-elsbetiae_contig544:29308..304781691683654.339383-CDS-L-elsbetiae_contig544:29308..30478Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig544 29309..30478 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig544.13684.1prot_L-elsbetiae_contig544.13684.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig544 21326..30478 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig544.13684.1

>prot_L-elsbetiae_contig544.13684.1 ID=prot_L-elsbetiae_contig544.13684.1|Name=mRNA_L-elsbetiae_contig544.13684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1397bp
PPRRTGKERDRWSTSGREPSNTPGEDTGSERQCETTGQRGSMPAPTHTKV
EKQFWKLVWPTLKTGGWSYEEGGKGRSGGGSDKSDEGRSSAAGGNSRRTS
SRHRKLSTSSSSSSGGSSSGNSNSTAPATSRTVVTPGGSAANTTPPKKPI
FIPPVVGVASEALEEAMRRSAPADGSLEGERRNRLVGVNAVIELLQQVSG
YPGTTTGIVNFDAVADAARGVMVRTPSPPTVPRNGVMAGTPANEPSLQGE
DAVASPSSRSRSSSVSSSDEAVIELPRVARGRGGMRSSTTSNYSTQQQAP
SSAGSGSAGVGAGSAAGNSDVSATSATRRGRVIKKPLRLEQQDLGRQTLA
GRSGRADAPSKLAARAAVVGQPQPGAAGGGVAELSSANGKAGSQASGKGR
AAVEVPAAASVRGAERCVARLGTAANGGDCCVETGTRNVLQGAGSSNSEG
GVATDEGSSSAGAALSSSAAGSAVRMVLPLERRTAELAPQGDAEEAGGDG
SPAGESSKKGKGPVRERDRMVVPDPPPERPIGGLGPAPEDTIKEYKRAFD
DVVWPALAEEFGWTKAYGPRMNDVYFLPTGVVRGQNGARCRIDYYDSNRQ
VLLHMVEHEENYARLLEKAWAAAVLKPRALGRKGGAAGGSKRKKRWTEQP
RRKSTMMKKEYPKKVSLVGPAYQVDPLNLPIPVSSEDYAPPEDVEFEQVW
DPSVMLPSSEGAAAPPDPGVLVEEFKGAVSHDKCLEIIYRCGGDHGDARK
MLTNLLRSWRARYKTAGVSAKEAAAAKAIVTKETAARLAKAPLPPSASAT
SGSSRKSGKAVANGGTCPIVEGSTTVTATTTRSAVAWGSGAAAVASRSSG
STGGGSSGSGGGGSGGGSSSSGSSSSSNRGGRSQGARAGADVVQDDFWCR
PLEYLAGGEAALKRQVEGGVSSLPPGARSRDKLSTDLNLSRPWTPTDAER
FTRALLEEGSKNFYAVQQKALPERQVCELVDRYYGGWKQTDGYKKLKESI
SLSKKQSACGKCHAGGDLICCDGCDAVYHPECVGISVVPEGDWFCPACGS
AKKNEIQKPAGGAALLPGAVLGQPGAKPAVAGANDEVPASAGKGKRTRPA
AAVEIAATAAVAASSKKPRAVVGAKGGVGAGRGSKPEPAPARGGDGGQPR
PPSHMRMERVPIQLGSARSSPSGVAGVPQKVSSEASGLAPAGLPAIATAA
SPASQHAEKDTRASNQLGKRVHVAQAPEQHSGKRAAKAAKATVARSTAGG
SLTPGARSVRSEVLTDQAEGEWDCLCCDRRNRVEDKRCRQCEGLRLFGVA
VNPDVAPTSASAPSTAAAAAAAAAPTSTTAAAAPASAVATAAPASTAAAA
APASTPAAAAPASTAAATAQASTAATAAPASTAAAAAPVAIAAAPVV
back to top

mRNA from alignment at L-elsbetiae_contig544:21326..30478+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig544.13684.1 ID=mRNA_L-elsbetiae_contig544.13684.1|Name=mRNA_L-elsbetiae_contig544.13684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9153bp|location=Sequence derived from alignment at L-elsbetiae_contig544:21326..30478+ (Laminarionema elsbetiae ELsaHSoW15)
CCGCCAAGGCGGACGGGAAAGGAGAGAGACAGGTGGTCAACGTGAGTACT
GTTATTGCGTTCGTTGGCTGTGCCGGTGTTTTAGTGTCGGCCGTTACAGC
CTGTGTTTGTTTTTTGACAAAGGCGGCGGCGCTGGAGAGCGGCATTTGTC
TCTGCGGAGTGATCCTCTCGGAATGAACTGCGTCGGCGTATAACTGCTTC
GGCCGCTTTTGCAGGGTGCTGAGTGCTGAGGATAGAGACTCTACTGCTGC
GGTTCGTGCCGAGTCTGCGCCTGGCAAAAGCGGGGACGATTGACAAGGGT
CGTGTGACTTCAGCAAACGCGACAGACAGCAGCGACATCAGACAGCAGAG
GATGTCAAAAACTGCTGCGTGTGGCAGACCAATCTAGAGTTTTTGGGGGA
CTGCAGGATCGGCCTTGATTGAGTAGTGGGAGATAATACGTATCGACGAA
GGATGAACGGTGCTGATCATCTCTTCCGTCTGTGCCCATCTGTCTGGGTG
TCCCGTGCCCTCGTTCTTTACACTCTGCCGGTCTACTCGCGTTTTTTACG
CAGGTCGGGGCGGGAGCCCTCAAATACACCAGGAGAGGATACGGGCAGCG
AGCGCCAGTGTGAGACCACGGGACAACGTGGAAGCATGCCGGCCCCCACG
CACACCAAGGTCGAGAAACAATTCTGGAAGCTGGTGTGGCCAACGCTGAA
GACCGGCGGTTGGAGTTACGAAGAAGGAGGTAAAGGAAGGAGTGGCGGCG
GCAGCGACAAGTCCGACGAAGGGAGGTCGTCAGCGGCGGGGGGAAACAGC
CGCCGGACTAGCTCTCGGCATCGTAAACTGAGTACTAGTTCTAGCAGCAG
CAGCGGAGGCAGCAGTAGCGGTAACAGCAACAGTACCGCTCCTGCGACTT
CTCGAACGGTGGTAACGCCGGGAGGCTCTGCCGCCAATACAACACCACCC
AAGAAACCGATCTTCATTCCTCCGGTCGTAGGGGTCGCGAGCGAGGCATT
GGAGGAGGCTATGCGGCGCTCGGCTCCTGCGGATGGCTCTCTCGAGGGAG
AAAGGCGGAACCGCTTGGTGGGGGTAAACGCGGTGATTGAGCTTCTTCAG
CAGGTGTCCGGGTACCCTGGCACAACAACAGGTATCGTCAATTTCGACGC
TGTGGCAGACGCCGCCCGGGGTGTAATGGTACGGACGCCGTCTCCGCCAA
CTGTACCGAGAAATGGAGTGATGGCAGGGACGCCCGCTAACGAGGTGAGC
TTGTGTGTTCTTACACAGCGGCACGGCGCGTCATGAGTACAAGGCCAGTC
TTGAGCAGCTTCGACTGCTGCTGTAACACACATGACATGCTGTGAGATCG
TTACAAGTTTTCCATTTGCACGATGTATTTTACAACAGCGGTAGACTACC
CAGTTTTTTTTCTTTTGCCACAATTCTTGGTCATGCCCAAGGTGTGGGGA
AATAACCATGTGCAACGCTCCTGCGCTAGCTATTAGTTAAACACAAAAAA
TGCTGGAACTGTTGTGTATTTATTGCTGGTAAGCCCGACAGCCAGAACGG
TAGGGGAGTTTGCAGACACCGGTATGCATGTCGTACGGTATGGCTGTGGT
CTATGTACTGGGTGCATCTCGGGTTATTTCACTCTACTGCGCAGGCATTG
GTACCGCGCTTGAACATCGTTTGTAACTGCTGTACAATATGGTTTATGTA
CTGGGTGCATCTCGGGTTATCTCACTCTACTGCGCAGACATTGGTACCGC
GCTTGAACATCGTTTGTAACTGCTGTATGTAGCTGTGTTGAAGGGGACAG
ACCGGAGGAGATGCGCCTACTCAAGGCCTAGTTAGCTACTAACCCTTCAG
ACTACGTTTAAAAGTGTGTGGCAGCCTGCCAAAAGGTACTGCTGTTGTCC
GGGGAGTAGAGTCCTGCTTATATAGCTTATGCTTGCGTGGGGGCGGGTGA
AGCTGTTCACACAAAAATTACGTTTAAGCTGGGGTACAGCAGCACTGAAT
CAAGCTTTAGTCGATGTGATACCCTGTGAGTCTTCTGCGACTTGCCTCAC
TGCAGAGCTTCTGGTGTACGATCGTAGAGTGACCCAAGACAAGAGGTGAC
CACAGCGGTCAGATGTGCGGGAATGTAACGGCAACACCCCGCCCACCCGC
TTCTCTTTTGCCCTGGTCGCCCTTGCGTCATTCCCGTGTTTGTGCGTTTA
CCGATTCGGGGTATCTAACGTGTGCGAGCAGCCATCACTGCAGGGTGAGG
ACGCAGTGGCATCCCCGTCAAGCAGAAGCCGCAGCAGCAGTGTCAGCAGT
TCGGACGAGGCTGTAATCGAACTACCGCGAGTGGCGCGTGGTCGGGGCGG
CATGCGGAGCTCTACGACCAGCAACTACAGCACTCAGCAGCAGGCGCCGT
CCTCCGCCGGTTCTGGGTCTGCTGGTGTCGGGGCTGGGTCTGCTGCCGGC
AATAGCGATGTGTCGGCCACCTCGGCCACGAGGCGTGGTCGCGTAATCAA
GAAGCCCCTCAGGCTCGAGCAGCAGGACCTCGGGCGGCAGACGTTAGCCG
GCAGAAGCGGACGAGCGGACGCACCTTCGAAGCTTGCAGCTCGGGCAGCC
GTCGTAGGTCAGCCCCAGCCAGGGGCTGCTGGGGGAGGCGTGGCCGAGCT
CTCGAGTGCCAACGGTAAGGCGGGCAGTCAAGCGAGTGGCAAGGGCCGCG
CCGCGGTGGAAGTACCCGCGGCAGCGTCGGTGAGAGGGGCAGAGCGCTGC
GTCGCACGGCTGGGTACCGCGGCTAACGGCGGCGACTGCTGTGTCGAGAC
CGGAACCAGGAACGTGTTGCAGGGTGCTGGTAGCAGTAACAGCGAGGGTG
GCGTCGCAACGGACGAAGGTTCAAGCTCGGCAGGCGCGGCGCTGTCGTCC
TCTGCGGCAGGCTCTGCGGTACGAATGGTGCTGCCACTGGAGCGGCGCAC
GGCGGAGCTGGCGCCGCAAGGAGATGCCGAGGAGGCTGGTGGCGACGGCA
GCCCTGCCGGGGAATCTTCCAAGAAAGGAAAAGGTCCTGTCAGAGAACGC
GATCGCATGGTGGTGCCGGACCCGCCGCCGGAACGGCCTATCGGGGGGCT
CGGGCCGGCGCCTGAGGATACCATCAAGGAGTACAAGCGCGCTTTCGATG
ATGTGAGGAATATGTTTGAACCCCATATCGAGTCTTTGCTCTAGTATGGG
TTAGGTTCCATCTTTGATTCTTTGTTTAATTTTAAGGACATTGCTCAACG
ACCCTGTCGACCGCAACACGGCACGAGATGAATCACATTGCATGGTTGCA
TACCTTGACGCGCCCACCTCTCGAGCAGCGTATTGTACGAGATCGGCAGT
GGCAGTTATTTCGCCGCAAGTACGCAGCGCCCTAAGGTAGTGAAGCACCT
CAGCCTTGCTTTGCCCCCCGTTTTACTGCTGCGCCGCTCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGCATGCCCCCTTTCCCGAACGGTTTGAAGATCCGAGACAGTGTGACTAG
CCACCCTGCTCACGCAGCGCCCAGTCAGTGTTCCAGTAGACAGCAGCCCA
CGCCACCCAACACATTCAACCACCCACCATTGATGCTCTTGCCCCCCCTT
GGTGCAGGTTGTTTGGCCCGCCCTTGCAGAGGAGTTCGGTTGGACGAAGG
CGTACGGCCCCCGCATGAACGACGTATATTTCCTTCCAACGGGAGTCGTG
CGGGGACAGAACGGGGCGAGGTGCCGCATCGACTACTACGACAGCAACAG
ACAGGCAAGAGTTGGTCCGCGCTGCTGTGTTCCGTCAGGAGCGTAGTTGC
GAAGAAGTAAACAAAGTGTTGTCTAAAGGGTAGCCTTGTCAATTGCTGGA
GGCCCGTGCACACTTCGATGCGCTCGGTGTTACAGAGAGCGTGGCATCAG
CTCGGTATTGCTGAACCAGTCTGCACTTTGCTCTCGCGTGTTCAGGGGTT
GTAGCCGTCAAGGATTGAGCACACTGTACGCTACAGTATTCTGTATTGTA
GCGCCGCAACGTGGGTAGACTTAGAGGGCAGGTGATCGAGAAAAAAAAAA
TTCCAGTCGTGTTCAGCCGGTCCTTGCTTGGCTTTCCAGGAACCGGAGGA
ACAACAGCTCTGCGCTTCTTTCCGTGTGTTCAATTGCGCGTGTAGGTGTT
GCTTCACATGGTGGAACACGAGGAGAATTACGCCCGCCTTTTGGAGAAGG
CGTGGGCGGCGGCGGTCTTGAAGCCAAGGGCACTCGGGAGAAAGGGTGGG
GCGGCTGGAGGCTCCAAGCGAAAGAAGCGCTGGACGGAGCAGCCAAGGGT
GGGTTGGGTTGAGACGAGTACCTTCCTGACATGCAGTCGGGCGTGTCAGA
CGTCGCCAAATCACTCCGTGTGGTGCGCTGATCGATTGGACAGTTTTTGC
GTGGTCTTTCCTCGTGGCACATAAATACATATGCAGATTGGTCTCTGGGA
ACTTCTGTTACGAAATCTGAATCAGTAGGCTATCGGCCTCCAACAGCCCA
AAAAAACGTCAGTATGAAGCAGCTGTTTTGAGCATGGCTATACATACCAG
GAGACTGGACAGCTATTGTACCTGATGAGCATAGACCGGCACAGCTCTGT
TTGGTTCAAGGGAGCGGCAGCACAGAAAAGAAGCAGTTGTTTGTTTGTTT
CAGTATGCACAGCAGCTGCTGCTTAGGTGCTCAGAACACAGCAGCAGCTC
TTGCTGTTTTGTTTTTGTTTTTTTCAGTTGTAAATTTGGGAGTACTTCTG
CTGCCTTCGCATGTTTGCTTTGGTCTTGCATCACCCCCTGCCGCTGTGCT
TTCATGAGCTCGCTCCGAAGGGGGGTCTTGTATACATACGCCATACAAAA
ACAGCAAAGATTTTGACATCTCTAGGCGTCGCGGTTTTTGATTACAATAT
CGTCTCTCAGCGTTTGAAATATTTCTCCCCTCCCTTCCCCCCCCCTTGAT
GATCGGCTGCTCTGCTGCACCCCCTCCCCCCCCCACCCCGTGTGTCACTT
CGGGCTTACGTATGTACGCACATGTTCCCCATCCACGATAAACAGCGTAA
ATCAACGATGATGAAGAAGGAGTACCCCAAGAAGGTCTCCCTGGTGGGAC
CCGCTTATCAGGTGAGGGGGTTGACAAGGTTGTGGTAGAGACTGGGTGGG
AAGCTGGAGTTGAGAGTCTGTTTCCGAGGGTTTGTCTCAAAGTTCGCGGC
GCGACGACAGTGGAAAACGGTTCGGTTTTCACTCTACGTAGGCTTCCTTC
CCTCAGCTGTCGAACAAGTCATGAGAGTTGTGTTGGCGCTGAAGTTCAAA
TCGACGAAGAATCACGAGACGGACTAACCACCACGGCGTATTTCCTCCGA
TACTCAAAAGCGTTTCCCGAACATCGCTTTGTCTCGAGTTCAAGATCGAG
AAGGTAAAATACACTTTCGCGGCCCTAAGCACGTCCTATTTGTGCATATG
TCTCCACAGGTGGACCCTCTGAACTTGCCCATTCCTGTGTCGAGCGAGGA
CTACGCACCTCCGGAAGATGTGGAATTCGAGCAGGTGTGGGACCCGAGTG
TCATGCTGCCCTCGTCGGAAGGCGCTGCGGCACCTCCGGATCCTGGCGTG
CTCGTCGAAGAATTCAAGGGCGCGGTCAGCCACGACAAGGTGGGGGGAAA
CCGCGAAGTGTTTTGCAGGGTATTTTGTTTTGTTGTTTTTTTCGCCCACG
ATCGATCGTGCTCTGCTCATTTTCTCACGCTTGGCTATCTCCGAAACCCA
CCCGCTGATTAGCTCCGCTACGTACTGCTGTTCCCGGATAACGAACCCCC
GTTTTTGATTTTACATTTTTTACATCAGTGCCTGGAAATAATTTACCGCT
GCGGCGGGGATCACGGCGACGCTCGCAAGATGCTGACGAACCTCCTACGC
TCCTGGAGGGCCCGCTACAAGACAGCGGGGGTGTCGGCGAAGGAGGCGGC
AGCGGCAAAGGCAATTGTGACGAAAGAGACCGCTGCGCGCCTCGCGAAGG
CACCGCTGCCGCCGTCAGCGTCGGCGACATCGGGGAGCTCCAGAAAAAGC
GGCAAAGCCGTTGCTAACGGTGGTACTTGTCCGATCGTGGAGGGTTCGAC
CACGGTGACGGCAACGACGACAAGAAGCGCGGTGGCCTGGGGGAGCGGAG
CGGCGGCGGTGGCGTCGAGGAGTTCCGGTTCAACCGGGGGTGGCAGCAGC
GGTAGTGGCGGCGGTGGTAGCGGCGGCGGCAGCAGCAGCAGCGGCAGCAG
CAGCAGCAGCAACCGTGGTGGTCGGAGTCAGGGCGCCCGTGCTGGGGCTG
ATGTGGTGCAGGACGACTTCTGGTGCCGGCCGTTGGAGTATCTTGCCGGC
GGCGAGGCCGCTCTGAAACGGCAGGTGGAAGGAGGTGTGTCCAGCCTCCC
ACCTGGGGCCAGGAGCAGGGACAAGCTGTCGACGGACCTAAACCTTTCGC
GGCCGTGGACCCCCACAGACGCAGAGAGGTTCACTCGGGCGCTGCTGGAG
GAAGGGTCGAAAAACTTCTATGCTGTGCAGGTAAGCTAAACGCCAGAAAA
GGGCGTCATGAGGCACCAGGAACATCCCATGAACTATGTAGCTGTAAAAT
TGAACGCCCCGAAATGAGCAACTTGTGTTCTGTCGATGGTGAGCAACAGT
TGGTTTGAGGCCTTGCAATTTCCTTCGCGTGATAGCAAACCGAACCTGGC
AGGCGGCACCGCAACATGCAAATAATGATAGTCACAGACACTTATCAATC
TGACGCTGCCTCTATCCTCTTCATAAGCTCAATTGACCTGAGTCTGACAG
ACTCTGCGCTCACTAGTAGTACAATGAGGCCCCCGCTTGTCTCTATTCGA
GTTATTGAGCTGGATCTTGCTAACAAGTGTCATGTATAGGTATGGTCCTC
CAGTGTCAACGTAACCTTGCGTCGGGGATCTCGTGGAGTCATATGCGCGC
ACTGACGCACGAGCGCCCCAACCCTTGTTGTCCTCCTCTTTGCTCCTGTC
CGAGCAGAAGGCGCTGCCAGAGAGACAGGTGTGCGAGCTGGTGGACCGCT
ACTACGGAGGCTGGAAACAAACGGATGGGTACAAGAAACTCAAGGAATCC
ATCAGGTAGGAAAAAACTAAAAAATCACCCCGAGCATCCTGGGCAGGTGC
CAAGAAGTATGTTGCCATGGTCCTCCAGCGAGATGTTTGTTGCTGTGCTA
ACGTCTCGTTGCTCTTGCTGTCGAGGCGAGGTCCCGAGGTCCCCTAGTTG
TGTGTGTTTGTCGAGATCGTACACTTAATGCACATCTTGTGAATCATCTT
GGAGCAGATTCCCACGGGGTAGTCCGTATATACCCGCTTTAACCGGATAT
GTATCTGCTTGTCTCCCCTTCTTTCCTTATCTCTCTCCCTCCGCCCCCCT
TTCCCCTGTCCGACCGGTTGTTGATCCGTTGTTCGCTCACCTTTCCTTTC
TTCCTATGTATAACCCTCACTCTCACCCGAATCACCGTGCCTCTACCAAA
CAATAAATTGGCTGCCCACGGACCAACGACGCTGGACCACAGTCTGTCCA
AGAAACAGTCGGTGAGTGTGATGCCGAAACCAATTTAAATGCCGCTGTTG
TCAATGAGCGACAGTTCTCCCAGGGATGTCGTGGTACGATACAGGTTTTT
GTTGGAGATGGTTTCAGGTAGAGCGGTCTTTCGCAAAAAATAAAAGAGAG
TCCCGTCTCCAATGTGGGTTAGGTTCCATTTTTGATTATCTGCTTATCTT
TCAAAAGGTACTCGGAAGTCCGCCGAGCTCAACCTCCCTTCTGGCAGCAC
TGGTTGCGATTTCATCCCCCGTGCCCGAGTTTCTGCTTGCATCGGGCGCG
ATACGCGCGCAAGCCAGTGCCGCGATCCGCTGCCTGTTCTCGCGCTCCTT
ACACTCTCTTGTGTCGTTGGTTTGTGCTGCCAGGCGTGCGGGAAGTGCCA
CGCCGGAGGAGACCTCATCTGCTGCGACGGTTGCGACGCCGTCTACCACC
CGGAGTGTGTCGGAATTTCCGTTGTCCCCGAGGGAGATTGGTTCTGCCCC
GCATGCGGCTCAGCCAAGAAAAACGAGATCCAAAAGCCGGCGGGGGGCGC
TGCTCTCCTGCCCGGAGCCGTGCTGGGCCAGCCGGGCGCGAAACCGGCGG
TGGCGGGTGCTAATGACGAGGTCCCCGCCAGCGCCGGCAAGGGTAAAAGA
ACTCGCCCGGCGGCAGCCGTTGAAATCGCCGCGACCGCGGCAGTCGCGGC
GTCGTCGAAGAAGCCCCGGGCGGTTGTGGGCGCCAAAGGCGGCGTCGGGG
CTGGTCGTGGAAGCAAGCCTGAGCCGGCTCCAGCGCGGGGAGGAGATGGA
GGGCAGCCACGGCCGCCGTCGCACATGCGGATGGAGCGAGTGCCGATCCA
GCTGGGCAGCGCTCGCAGCTCTCCCAGCGGCGTGGCTGGGGTTCCTCAGA
AAGTCTCGTCGGAAGCAAGCGGACTTGCGCCTGCGGGGTTGCCGGCGATC
GCGACGGCGGCTTCTCCCGCGTCTCAGCACGCAGAGAAAGACACCAGGGC
TTCAAACCAGCTCGGAAAGCGGGTGCATGTTGCCCAAGCCCCAGAGCAGC
ATTCCGGAAAGCGCGCCGCCAAAGCAGCTAAAGCCACGGTAGCGCGGTCG
ACTGCGGGTGGAAGTTTAACCCCCGGTGCTAGATCCGTCCGCAGCGAGGT
CCTCACGGACCAGGCAGAGGGCGAGTGGGATTGCCTTTGCTGCGATCGCC
GCAACCGCGTCGAAGACAAACGGTGCCGTCAGTGCGAGGGCCTCAGACTG
TTCGGAGTGGCCGTGAACCCAGACGTGGCTCCGACCTCAGCTTCGGCTCC
CTCCACCGCGGCTGCGGCTGCGGCTGCGGCTGCTCCGACCTCCACCACAG
CTGCGGCTGCTCCGGCCTCCGCAGTGGCTACGGCTGCTCCGGCTTCCACC
GCGGCTGCGGCTGCTCCGGCTTCCACCCCGGCTGCGGCTGCTCCGGCTTC
CACTGCGGCTGCAACTGCTCAGGCTTCCACCGCGGCTACGGCTGCTCCGG
CCTCCACCGCGGCTGCGGCTGCTCCGGTTGCCATCGCTGCTGCACCCGTC
GTG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig544:21326..30478+

>mRNA_L-elsbetiae_contig544.13684.1 ID=mRNA_L-elsbetiae_contig544.13684.1|Name=mRNA_L-elsbetiae_contig544.13684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=8382bp|location=Sequence derived from alignment at L-elsbetiae_contig544:21326..30478+ (Laminarionema elsbetiae ELsaHSoW15)
CCGCCAAGGCGGACGGGAAAGGAGAGAGACAGGTGGTCAACCCGCCAAGG
CGGACGGGAAAGGAGAGAGACAGGTGGTCAACGTCGGGGCGGGAGCCCTC
AAATACACCAGGAGAGGATACGGGCAGCGAGCGCCAGTGTGAGACCACGG
GACAACGTGGAAGCATGCCGGCCCCCACGCACACCAAGGTCGAGAAACAA
TTCTGGAAGCTGGTGTGGCCAACGCTGAAGACCGGCGGTTGGAGTTACGA
AGAAGGAGGTAAAGGAAGGAGTGGCGGCGGCAGCGACAAGTCCGACGAAG
GGAGGTCGTCAGCGGCGGGGGGAAACAGCCGCCGGACTAGCTCTCGGCAT
CGTAAACTGAGTACTAGTTCTAGCAGCAGCAGCGGAGGCAGCAGTAGCGG
TAACAGCAACAGTACCGCTCCTGCGACTTCTCGAACGGTGGTAACGCCGG
GAGGCTCTGCCGCCAATACAACACCACCCAAGAAACCGATCTTCATTCCT
CCGGTCGTAGGGGTCGCGAGCGAGGCATTGGAGGAGGCTATGCGGCGCTC
GGCTCCTGCGGATGGCTCTCTCGAGGGAGAAAGGCGGAACCGCTTGGTGG
GGGTAAACGCGGTGATTGAGCTTCTTCAGCAGGTGTCCGGGTACCCTGGC
ACAACAACAGGTATCGTCAATTTCGACGCTGTGGCAGACGCCGCCCGGGG
TGTAATGGTACGGACGCCGTCTCCGCCAACTGTACCGAGAAATGGAGTGA
TGGCAGGGACGCCCGCTAACGAGGTCGGGGCGGGAGCCCTCAAATACACC
AGGAGAGGATACGGGCAGCGAGCGCCAGTGTGAGACCACGGGACAACGTG
GAAGCATGCCGGCCCCCACGCACACCAAGGTCGAGAAACAATTCTGGAAG
CTGGTGTGGCCAACGCTGAAGACCGGCGGTTGGAGTTACGAAGAAGGAGG
TAAAGGAAGGAGTGGCGGCGGCAGCGACAAGTCCGACGAAGGGAGGTCGT
CAGCGGCGGGGGGAAACAGCCGCCGGACTAGCTCTCGGCATCGTAAACTG
AGTACTAGTTCTAGCAGCAGCAGCGGAGGCAGCAGTAGCGGTAACAGCAA
CAGTACCGCTCCTGCGACTTCTCGAACGGTGGTAACGCCGGGAGGCTCTG
CCGCCAATACAACACCACCCAAGAAACCGATCTTCATTCCTCCGGTCGTA
GGGGTCGCGAGCGAGGCATTGGAGGAGGCTATGCGGCGCTCGGCTCCTGC
GGATGGCTCTCTCGAGGGAGAAAGGCGGAACCGCTTGGTGGGGGTAAACG
CGGTGATTGAGCTTCTTCAGCAGGTGTCCGGGTACCCTGGCACAACAACA
GGTATCGTCAATTTCGACGCTGTGGCAGACGCCGCCCGGGGTGTAATGGT
ACGGACGCCGTCTCCGCCAACTGTACCGAGAAATGGAGTGATGGCAGGGA
CGCCCGCTAACGAGCCATCACTGCAGGGTGAGGACGCAGTGGCATCCCCG
TCAAGCAGAAGCCGCAGCAGCAGTGTCAGCAGTTCGGACGAGGCTGTAAT
CGAACTACCGCGAGTGGCGCGTGGTCGGGGCGGCATGCGGAGCTCTACGA
CCAGCAACTACAGCACTCAGCAGCAGGCGCCGTCCTCCGCCGGTTCTGGG
TCTGCTGGTGTCGGGGCTGGGTCTGCTGCCGGCAATAGCGATGTGTCGGC
CACCTCGGCCACGAGGCGTGGTCGCGTAATCAAGAAGCCCCTCAGGCTCG
AGCAGCAGGACCTCGGGCGGCAGACGTTAGCCGGCAGAAGCGGACGAGCG
GACGCACCTTCGAAGCTTGCAGCTCGGGCAGCCGTCGTAGGTCAGCCCCA
GCCAGGGGCTGCTGGGGGAGGCGTGGCCGAGCTCTCGAGTGCCAACGGTA
AGGCGGGCAGTCAAGCGAGTGGCAAGGGCCGCGCCGCGGTGGAAGTACCC
GCGGCAGCGTCGGTGAGAGGGGCAGAGCGCTGCGTCGCACGGCTGGGTAC
CGCGGCTAACGGCGGCGACTGCTGTGTCGAGACCGGAACCAGGAACGTGT
TGCAGGGTGCTGGTAGCAGTAACAGCGAGGGTGGCGTCGCAACGGACGAA
GGTTCAAGCTCGGCAGGCGCGGCGCTGTCGTCCTCTGCGGCAGGCTCTGC
GGTACGAATGGTGCTGCCACTGGAGCGGCGCACGGCGGAGCTGGCGCCGC
AAGGAGATGCCGAGGAGGCTGGTGGCGACGGCAGCCCTGCCGGGGAATCT
TCCAAGAAAGGAAAAGGTCCTGTCAGAGAACGCGATCGCATGGTGGTGCC
GGACCCGCCGCCGGAACGGCCTATCGGGGGGCTCGGGCCGGCGCCTGAGG
ATACCATCAAGGAGTACAAGCGCGCTTTCGATGATCCATCACTGCAGGGT
GAGGACGCAGTGGCATCCCCGTCAAGCAGAAGCCGCAGCAGCAGTGTCAG
CAGTTCGGACGAGGCTGTAATCGAACTACCGCGAGTGGCGCGTGGTCGGG
GCGGCATGCGGAGCTCTACGACCAGCAACTACAGCACTCAGCAGCAGGCG
CCGTCCTCCGCCGGTTCTGGGTCTGCTGGTGTCGGGGCTGGGTCTGCTGC
CGGCAATAGCGATGTGTCGGCCACCTCGGCCACGAGGCGTGGTCGCGTAA
TCAAGAAGCCCCTCAGGCTCGAGCAGCAGGACCTCGGGCGGCAGACGTTA
GCCGGCAGAAGCGGACGAGCGGACGCACCTTCGAAGCTTGCAGCTCGGGC
AGCCGTCGTAGGTCAGCCCCAGCCAGGGGCTGCTGGGGGAGGCGTGGCCG
AGCTCTCGAGTGCCAACGGTAAGGCGGGCAGTCAAGCGAGTGGCAAGGGC
CGCGCCGCGGTGGAAGTACCCGCGGCAGCGTCGGTGAGAGGGGCAGAGCG
CTGCGTCGCACGGCTGGGTACCGCGGCTAACGGCGGCGACTGCTGTGTCG
AGACCGGAACCAGGAACGTGTTGCAGGGTGCTGGTAGCAGTAACAGCGAG
GGTGGCGTCGCAACGGACGAAGGTTCAAGCTCGGCAGGCGCGGCGCTGTC
GTCCTCTGCGGCAGGCTCTGCGGTACGAATGGTGCTGCCACTGGAGCGGC
GCACGGCGGAGCTGGCGCCGCAAGGAGATGCCGAGGAGGCTGGTGGCGAC
GGCAGCCCTGCCGGGGAATCTTCCAAGAAAGGAAAAGGTCCTGTCAGAGA
ACGCGATCGCATGGTGGTGCCGGACCCGCCGCCGGAACGGCCTATCGGGG
GGCTCGGGCCGGCGCCTGAGGATACCATCAAGGAGTACAAGCGCGCTTTC
GATGATGTTGTTTGGCCCGCCCTTGCAGAGGAGTTCGGTTGGACGAAGGC
GTACGGCCCCCGCATGAACGACGTATATTTCCTTCCAACGGGAGTCGTGC
GGGGACAGAACGGGGCGAGGTGCCGCATCGACTACTACGACAGCAACAGA
CAGGTTGTTTGGCCCGCCCTTGCAGAGGAGTTCGGTTGGACGAAGGCGTA
CGGCCCCCGCATGAACGACGTATATTTCCTTCCAACGGGAGTCGTGCGGG
GACAGAACGGGGCGAGGTGCCGCATCGACTACTACGACAGCAACAGACAG
GTGTTGCTTCACATGGTGGAACACGAGGAGAATTACGCCCGCCTTTTGGA
GAAGGCGTGGGCGGCGGCGGTCTTGAAGCCAAGGGCACTCGGGAGAAAGG
GTGGGGCGGCTGGAGGCTCCAAGCGAAAGAAGCGCTGGACGGAGCAGCCA
AGGGTGTTGCTTCACATGGTGGAACACGAGGAGAATTACGCCCGCCTTTT
GGAGAAGGCGTGGGCGGCGGCGGTCTTGAAGCCAAGGGCACTCGGGAGAA
AGGGTGGGGCGGCTGGAGGCTCCAAGCGAAAGAAGCGCTGGACGGAGCAG
CCAAGGCGTAAATCAACGATGATGAAGAAGGAGTACCCCAAGAAGGTCTC
CCTGGTGGGACCCGCTTATCAGCGTAAATCAACGATGATGAAGAAGGAGT
ACCCCAAGAAGGTCTCCCTGGTGGGACCCGCTTATCAGGTGGACCCTCTG
AACTTGCCCATTCCTGTGTCGAGCGAGGACTACGCACCTCCGGAAGATGT
GGAATTCGAGCAGGTGTGGGACCCGAGTGTCATGCTGCCCTCGTCGGAAG
GCGCTGCGGCACCTCCGGATCCTGGCGTGCTCGTCGAAGAATTCAAGGGC
GCGGTCAGCCACGACAAGGTGGACCCTCTGAACTTGCCCATTCCTGTGTC
GAGCGAGGACTACGCACCTCCGGAAGATGTGGAATTCGAGCAGGTGTGGG
ACCCGAGTGTCATGCTGCCCTCGTCGGAAGGCGCTGCGGCACCTCCGGAT
CCTGGCGTGCTCGTCGAAGAATTCAAGGGCGCGGTCAGCCACGACAAGTG
CCTGGAAATAATTTACCGCTGCGGCGGGGATCACGGCGACGCTCGCAAGA
TGCTGACGAACCTCCTACGCTCCTGGAGGGCCCGCTACAAGACAGCGGGG
GTGTCGGCGAAGGAGGCGGCAGCGGCAAAGGCAATTGTGACGAAAGAGAC
CGCTGCGCGCCTCGCGAAGGCACCGCTGCCGCCGTCAGCGTCGGCGACAT
CGGGGAGCTCCAGAAAAAGCGGCAAAGCCGTTGCTAACGGTGGTACTTGT
CCGATCGTGGAGGGTTCGACCACGGTGACGGCAACGACGACAAGAAGCGC
GGTGGCCTGGGGGAGCGGAGCGGCGGCGGTGGCGTCGAGGAGTTCCGGTT
CAACCGGGGGTGGCAGCAGCGGTAGTGGCGGCGGTGGTAGCGGCGGCGGC
AGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAACCGTGGTGGTCGGAGTCA
GGGCGCCCGTGCTGGGGCTGATGTGGTGCAGGACGACTTCTGGTGCCGGC
CGTTGGAGTATCTTGCCGGCGGCGAGGCCGCTCTGAAACGGCAGGTGGAA
GGAGGTGTGTCCAGCCTCCCACCTGGGGCCAGGAGCAGGGACAAGCTGTC
GACGGACCTAAACCTTTCGCGGCCGTGGACCCCCACAGACGCAGAGAGGT
TCACTCGGGCGCTGCTGGAGGAAGGGTCGAAAAACTTCTATGCTGTGCAG
TGCCTGGAAATAATTTACCGCTGCGGCGGGGATCACGGCGACGCTCGCAA
GATGCTGACGAACCTCCTACGCTCCTGGAGGGCCCGCTACAAGACAGCGG
GGGTGTCGGCGAAGGAGGCGGCAGCGGCAAAGGCAATTGTGACGAAAGAG
ACCGCTGCGCGCCTCGCGAAGGCACCGCTGCCGCCGTCAGCGTCGGCGAC
ATCGGGGAGCTCCAGAAAAAGCGGCAAAGCCGTTGCTAACGGTGGTACTT
GTCCGATCGTGGAGGGTTCGACCACGGTGACGGCAACGACGACAAGAAGC
GCGGTGGCCTGGGGGAGCGGAGCGGCGGCGGTGGCGTCGAGGAGTTCCGG
TTCAACCGGGGGTGGCAGCAGCGGTAGTGGCGGCGGTGGTAGCGGCGGCG
GCAGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAACCGTGGTGGTCGGAGT
CAGGGCGCCCGTGCTGGGGCTGATGTGGTGCAGGACGACTTCTGGTGCCG
GCCGTTGGAGTATCTTGCCGGCGGCGAGGCCGCTCTGAAACGGCAGGTGG
AAGGAGGTGTGTCCAGCCTCCCACCTGGGGCCAGGAGCAGGGACAAGCTG
TCGACGGACCTAAACCTTTCGCGGCCGTGGACCCCCACAGACGCAGAGAG
GTTCACTCGGGCGCTGCTGGAGGAAGGGTCGAAAAACTTCTATGCTGTGC
AGCAGAAGGCGCTGCCAGAGAGACAGGTGTGCGAGCTGGTGGACCGCTAC
TACGGAGGCTGGAAACAAACGGATGGGTACAAGAAACTCAAGGAATCCAT
CAGCAGAAGGCGCTGCCAGAGAGACAGGTGTGCGAGCTGGTGGACCGCTA
CTACGGAGGCTGGAAACAAACGGATGGGTACAAGAAACTCAAGGAATCCA
TCAGTCTGTCCAAGAAACAGTCGTCTGTCCAAGAAACAGTCGGCGTGCGG
GAAGTGCCACGCCGGAGGAGACCTCATCTGCTGCGACGGTTGCGACGCCG
TCTACCACCCGGAGTGTGTCGGAATTTCCGTTGTCCCCGAGGGAGATTGG
TTCTGCCCCGCATGCGGCTCAGCCAAGAAAAACGAGATCCAAAAGCCGGC
GGGGGGCGCTGCTCTCCTGCCCGGAGCCGTGCTGGGCCAGCCGGGCGCGA
AACCGGCGGTGGCGGGTGCTAATGACGAGGTCCCCGCCAGCGCCGGCAAG
GGTAAAAGAACTCGCCCGGCGGCAGCCGTTGAAATCGCCGCGACCGCGGC
AGTCGCGGCGTCGTCGAAGAAGCCCCGGGCGGTTGTGGGCGCCAAAGGCG
GCGTCGGGGCTGGTCGTGGAAGCAAGCCTGAGCCGGCTCCAGCGCGGGGA
GGAGATGGAGGGCAGCCACGGCCGCCGTCGCACATGCGGATGGAGCGAGT
GCCGATCCAGCTGGGCAGCGCTCGCAGCTCTCCCAGCGGCGTGGCTGGGG
TTCCTCAGAAAGTCTCGTCGGAAGCAAGCGGACTTGCGCCTGCGGGGTTG
CCGGCGATCGCGACGGCGGCTTCTCCCGCGTCTCAGCACGCAGAGAAAGA
CACCAGGGCTTCAAACCAGCTCGGAAAGCGGGTGCATGTTGCCCAAGCCC
CAGAGCAGCATTCCGGAAAGCGCGCCGCCAAAGCAGCTAAAGCCACGGTA
GCGCGGTCGACTGCGGGTGGAAGTTTAACCCCCGGTGCTAGATCCGTCCG
CAGCGAGGTCCTCACGGACCAGGCAGAGGGCGAGTGGGATTGCCTTTGCT
GCGATCGCCGCAACCGCGTCGAAGACAAACGGTGCCGTCAGTGCGAGGGC
CTCAGACTGTTCGGAGTGGCCGTGAACCCAGACGTGGCTCCGACCTCAGC
TTCGGCTCCCTCCACCGCGGCTGCGGCTGCGGCTGCGGCTGCTCCGACCT
CCACCACAGCTGCGGCTGCTCCGGCCTCCGCAGTGGCTACGGCTGCTCCG
GCTTCCACCGCGGCTGCGGCTGCTCCGGCTTCCACCCCGGCTGCGGCTGC
TCCGGCTTCCACTGCGGCTGCAACTGCTCAGGCTTCCACCGCGGCTACGG
CTGCTCCGGCCTCCACCGCGGCTGCGGCTGCTCCGGTTGCCATCGCTGCT
GCACCCGTCGTGGCGTGCGGGAAGTGCCACGCCGGAGGAGACCTCATCTG
CTGCGACGGTTGCGACGCCGTCTACCACCCGGAGTGTGTCGGAATTTCCG
TTGTCCCCGAGGGAGATTGGTTCTGCCCCGCATGCGGCTCAGCCAAGAAA
AACGAGATCCAAAAGCCGGCGGGGGGCGCTGCTCTCCTGCCCGGAGCCGT
GCTGGGCCAGCCGGGCGCGAAACCGGCGGTGGCGGGTGCTAATGACGAGG
TCCCCGCCAGCGCCGGCAAGGGTAAAAGAACTCGCCCGGCGGCAGCCGTT
GAAATCGCCGCGACCGCGGCAGTCGCGGCGTCGTCGAAGAAGCCCCGGGC
GGTTGTGGGCGCCAAAGGCGGCGTCGGGGCTGGTCGTGGAAGCAAGCCTG
AGCCGGCTCCAGCGCGGGGAGGAGATGGAGGGCAGCCACGGCCGCCGTCG
CACATGCGGATGGAGCGAGTGCCGATCCAGCTGGGCAGCGCTCGCAGCTC
TCCCAGCGGCGTGGCTGGGGTTCCTCAGAAAGTCTCGTCGGAAGCAAGCG
GACTTGCGCCTGCGGGGTTGCCGGCGATCGCGACGGCGGCTTCTCCCGCG
TCTCAGCACGCAGAGAAAGACACCAGGGCTTCAAACCAGCTCGGAAAGCG
GGTGCATGTTGCCCAAGCCCCAGAGCAGCATTCCGGAAAGCGCGCCGCCA
AAGCAGCTAAAGCCACGGTAGCGCGGTCGACTGCGGGTGGAAGTTTAACC
CCCGGTGCTAGATCCGTCCGCAGCGAGGTCCTCACGGACCAGGCAGAGGG
CGAGTGGGATTGCCTTTGCTGCGATCGCCGCAACCGCGTCGAAGACAAAC
GGTGCCGTCAGTGCGAGGGCCTCAGACTGTTCGGAGTGGCCGTGAACCCA
GACGTGGCTCCGACCTCAGCTTCGGCTCCCTCCACCGCGGCTGCGGCTGC
GGCTGCGGCTGCTCCGACCTCCACCACAGCTGCGGCTGCTCCGGCCTCCG
CAGTGGCTACGGCTGCTCCGGCTTCCACCGCGGCTGCGGCTGCTCCGGCT
TCCACCCCGGCTGCGGCTGCTCCGGCTTCCACTGCGGCTGCAACTGCTCA
GGCTTCCACCGCGGCTACGGCTGCTCCGGCCTCCACCGCGGCTGCGGCTG
CTCCGGTTGCCATCGCTGCTGCACCCGTCGTG
back to top