prot_L-elsbetiae_contig5390.13601.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5390.13601.1
Unique Nameprot_L-elsbetiae_contig5390.13601.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length481
Homology
BLAST of mRNA_L-elsbetiae_contig5390.13601.1 vs. uniprot
Match: A0A6H5KTC0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC0_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 3.260e-35
Identity = 199/469 (42.43%), Postives = 219/469 (46.70%), Query Frame = 0
Query:    1 MDDALGALMQAPSMAPVHPRPGGMAPPMGMVAPPAAY--------------PGAGGFSGTPPQQPGSYSPPGDXXXXXXXXXXXXXXXXXXXXPAAAPGPQPSAKTPPFGSSPXXXXXXXXXXXVTVAAAAATV-----------------GASSPSLALVSPQGE-GLTAPPKAGTAPAAXXXXXXXXXXXXXXXSGGPRSFPGIAVQLA---------------PSSTPXXXXXXXXXGDSVRLVPSEDESLRPEGAAAATAKSSA----ETPLMSTVDLSSRFQAQAAMSSGVA-----EGSFVGG---------------SSRN----GAAGLPXXXXXXXXXXXXXXXXXXXXXXXRPPAAYTQSSGPKPIKPDGFHSSASDKVLQERYGHTKIVKEFGAPPTAAQLGGAGA-------LPMPGXXXXXXXXXXXXXXXXXXXXXHQHQQAGGGQRNFGQPFSS 387
            MD ALGALMQAP+M P+ PRPG      GM  PP                 PG  GF G   QQPGSYSPPG+ XXXXX                A PG  P A T   GS P XXXXXXXXXX                                 +A  +P+G+   T PP A  A AA               +GGPRSFPG+AVQLA               P++ P          D     P EDESLRP   A A + SS      +PLMSTVDLSS+FQAQ A+S   A     EGSFVGG               S  N    GAA  P  XXXXXXXXXXXXXXX       PPA  T     K IKPDGFHSSASDKVLQ RYGHTKIVKEFGAPPTAAQLGGA         +P+PG                        Q  GGGQ ++GQPF +
Sbjct:  202 MDAALGALMQAPTMVPLAPRPGA-----GMAGPPPMXXXXXXXXXXXXVYPPGPAGFPGA--QQPGSYSPPGEGXXXXXYP--------------APPGASPPAAT---GSLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGKTEVASPAPKGDLAGTGPPDAAAAAAA---------------TGGPRSFPGVAVQLAAXXXXXXXXXXXXXSPAAAPKAGE------DFSGRPPFEDESLRPGAEAKANSSSSPGDGPSSPLMSTVDLSSKFQAQVAVSGAGAGAAAVEGSFVGGXXXXXXPVXXXXXHGSEPNCATAGAAPPPSVXXXXXXXXXXXXXXX-------PPAEQTGKKF-KLIKPDGFHSSASDKVLQARYGHTKIVKEFGAPPTAAQLGGAKGGYMAGPPMPLPGPPPNINGYAQKPQRQAQYGMMPPQQAVGGGQGHYGQPFGA 617          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5390.13601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KTC0_9PHAE3.260e-3542.43Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5390contigL-elsbetiae_contig5390:4864..7667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5390.13601.1mRNA_L-elsbetiae_contig5390.13601.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5390 4293..7687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5390.13601.1 ID=prot_L-elsbetiae_contig5390.13601.1|Name=mRNA_L-elsbetiae_contig5390.13601.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=481bp
MDDALGALMQAPSMAPVHPRPGGMAPPMGMVAPPAAYPGAGGFSGTPPQQ
PGSYSPPGDGGAAAGAFAAPPPAAAAAAAPAAAPGPQPSAKTPPFGSSPA
PASPPAPFPGVTVAAAAATVGASSPSLALVSPQGEGLTAPPKAGTAPAAA
GAGAGADAAASAAASGGPRSFPGIAVQLAPSSTPAAAAGAAAGGDSVRLV
PSEDESLRPEGAAAATAKSSAETPLMSTVDLSSRFQAQAAMSSGVAEGSF
VGGSSRNGAAGLPPPPAAHPTSAPNSATSGGVPPPSRPPAAYTQSSGPKP
IKPDGFHSSASDKVLQERYGHTKIVKEFGAPPTAAQLGGAGALPMPGAPP
NNGYAQQAQARPQYGAPPHQHQQAGGGQRNFGQPFSSGGGGMGGGGMQQA
FGQQQQQQQQQQQQSYGQAPPGAAFQAPPPPGAPSSGGVALPTPSGYAHQ
PAGVGFAPPRQLPPASTTVVAADSTSSAVL*
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