prot_L-elsbetiae_contig538.13586.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig538.13586.1
Unique Nameprot_L-elsbetiae_contig538.13586.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length246
Homology
BLAST of mRNA_L-elsbetiae_contig538.13586.1 vs. uniprot
Match: A0A6H5KUM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM0_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.600e-67
Identity = 130/242 (53.72%), Postives = 159/242 (65.70%), Query Frame = 0
Query:    2 AQENVRDQLESHWRAFDALAGNQNGANEAIIRALDVFEGARGAFTAGQAAAGNPASXXXXXXXXXXXXAMNAFGGQQ-DAPWAS-PTAMPRGNANADNSDDGARRAYFRAEEALMLAREQLARSEATLQEMGEVVDRAKMCIGSCYNTEQVASRQERKDVRARASLQALSRGDSGCAMSPVEMARAMAGLLRMHQSEFEMQETIICGLGYDTPRETVTAYREALGLRPFMDDSFRSEVQEVR 241
            + + +R Q+E HWR FD+LA  Q+  NEAIIRA+DVFEGARGAF A Q A G           XXXX A + FG  Q +  WAS                   RRAY RAEE                 +M E V+RA+ CI S YNT+ VASR+ER++VR+RASLQAL RGDSGCAM+PVEMARAMAGLLRMHQSE EMQE+I+ GLGY+T  E++T YREALG+RP++DD +RS+ QE+R
Sbjct:    3 SHQGMRAQIEGHWRDFDSLAEMQSRGNEAIIRAIDVFEGARGAFIAEQEARG---------AGXXXXAAPSMFGAHQWEGGWASGXXXXXXXXXXXXXXXXXXRRAYVRAEEXXXXXXXXXXXXXXXXXQMAEEVERARACINSFYNTDDVASREERREVRSRASLQALDRGDSGCAMTPVEMARAMAGLLRMHQSELEMQESIVYGLGYETSAESITGYREALGMRPYLDDQYRSQAQEIR 235          
BLAST of mRNA_L-elsbetiae_contig538.13586.1 vs. uniprot
Match: D8LS45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS45_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 3.880e-19
Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = 0
Query:  177 MSPVEMARAMAGLLRMHQSEFEMQ----------------------ETIICGLGYDTPRETVTAYREALGLRPFMDDSFRSEVQEVR 241
            M+PV+M+RAMAGLLRMHQSE EMQ                      E+I+ GLGY+TP E +T+YREALG+RP +DD  RS+ QE+R
Sbjct:    1 MTPVDMSRAMAGLLRMHQSELEMQSRPSEEERERLQTXXXXXITTKESIVYGLGYETPAELITSYREALGMRPHLDDQHRSQAQEIR 87          
BLAST of mRNA_L-elsbetiae_contig538.13586.1 vs. uniprot
Match: D8LS46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS46_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 1.890e-10
Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    2 AQENVRDQLESHWRAFDALAGNQNGANEAIIRALDVFEGARGAFTAGQAAAGNPA 56
            + + +R Q+E HWR FD+LA  Q+G NEAIIRA+DVFEGARGAF A Q A G  A
Sbjct:    3 SHQGMRAQIEGHWRNFDSLAEMQSGGNEAIIRAIDVFEGARGAFIAEQEARGGGA 57          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig538.13586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KUM0_9PHAE1.600e-6753.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS45_ECTSI3.880e-1951.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LS46_ECTSI1.890e-1061.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig538contigL-elsbetiae_contig538:15572..20006 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig538.13586.1mRNA_L-elsbetiae_contig538.13586.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig538 15572..20006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig538.13586.1 ID=prot_L-elsbetiae_contig538.13586.1|Name=mRNA_L-elsbetiae_contig538.13586.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=246bp
MAQENVRDQLESHWRAFDALAGNQNGANEAIIRALDVFEGARGAFTAGQA
AAGNPASAAAAVASSASAAAMNAFGGQQDAPWASPTAMPRGNANADNSDD
GARRAYFRAEEALMLAREQLARSEATLQEMGEVVDRAKMCIGSCYNTEQV
ASRQERKDVRARASLQALSRGDSGCAMSPVEMARAMAGLLRMHQSEFEMQ
ETIICGLGYDTPRETVTAYREALGLRPFMDDSFRSEVQEVRARGM*
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