prot_L-elsbetiae_contig5372.13569.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5372.13569.1
Unique Nameprot_L-elsbetiae_contig5372.13569.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length780
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5372.13569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 181..234
e-value: 8.4E-7
score: 30.8
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 181..219
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 186..215
score: 8.742

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5372contigL-elsbetiae_contig5372:1887..5467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5372.13569.1mRNA_L-elsbetiae_contig5372.13569.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5372 1795..6281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5372.13569.1 ID=prot_L-elsbetiae_contig5372.13569.1|Name=mRNA_L-elsbetiae_contig5372.13569.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=780bp
MGSFASKTLPRAASEIIRFPSATKTDEENENGNGDHGAGLFSNQQTAFPT
TLHRANFEGEAPLEGGAGLRGAGGSCGTLDQCKTDGKNKIGSNGDCDESA
PKTSKRHGGLSRSLADRIESPDFAPFGGSSVKEQPALLPVPVETITPDAP
FDADFMVRGTTRAARNDESSDKSRAPTFATPFVRKACDNCVQRKKRCDGG
TRCAQCIKSHQKCKRSGLRKRSDAPRGVAPPSVAGRGKSQHPRSRDEEPP
TPEVLPSRCRREGCQEPPLHGRREGRPLWCQLHFVSQNPHQPLRCAVLQR
TVSGDFLACWQETTWGWPGKAPTRCERHKTEGQQRLELVEVASLLRGLFA
QVVWPELRDRGWRKEVIRCKSPYSLWMPPNVVRGTTAFKRRIDFFDTAPQ
VIKYCLRTEEHHEWMMKVYHQLTQVSTPASQAEEVDSASQKLSSCVPQKR
TAGNVPPVADGEGTNYLSGSSPRDGAAFTQQAMHLQHERRNEPQNPSPAT
TRGFIQQLFSPTSSPERVEHGGNGSGSGSSRITDCFYLADAETRPPGTSA
RVGLQQPPRLAQTRTPAYRSHRAARLRAEGLDPAIVTRMGLASSEEFLGG
CLAKMGGGGENACGPMAALAASLRGFDVSVSGREHAAASASSSSSKRRCS
EVSHYYMQLNRSRDMAQKSRDWTQRVRDGQSSIASQTRQDWLIKEGGTAI
DPQRKQAGPTAPQDGSTEAHLGPKLPKDAEALPHAQVQLTRDTTSSCVEE
ARDVALVPSNKRKAGCLAGAADELSLASH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd