mRNA_L-elsbetiae_contig536.13546.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig536.13546.1 vs. uniprot
Match: D7G8N1_ECTSI (Eukaryotic translation initiation factor 3 subunit E n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N1_ECTSI) HSP 1 Score: 730 bits (1884), Expect = 1.080e-262 Identity = 364/397 (91.69%), Postives = 378/397 (95.21%), Query Frame = 1 Query: 1 MSEAVGAAPAATTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKTLNNTDEDPPDMVERRAEVFARMSALKEQAGILTEVFADKVAVEEASMTQVDHSTFTPQQLSVEKLIKEQNFTWKGIKAELELEDSALESFYANAKFQSDCGDYVTAAAALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGR*DELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKM 1191 MSEAV A PA+ TTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLD TNMSDYAMEIYK+LN+TDEDPPDMVERRAEVFARMS LK++AGILTEVFADK VEEA++TQVD ++FT QQLSVEKLIKEQNFTWKGIK EL LEDSALES+YANAKFQSDCGDYV AAAALKSYCDITQTPGVPGSGPNGM ALWGRLACEILVANWDGALTLLRELK CIEFTNAPPL+QLQQRSWLLHWSLFVFFNHANGR DELVTLFFEEPFMQAIQTNCPWLLRYLVTA+ILTKAGAGGGKYVMRDLMRVLE EKHAYTDPVTEFLEGLQVSFDFDGAQ RL ECERVLLSDFFLCNC +EFMEAARHFIFETYCRIHHKIDIGMLA+KM Sbjct: 1 MSEAVEAVPASRTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDGTNMSDYAMEIYKSLNSTDEDPPDMVERRAEVFARMSTLKDEAGILTEVFADKAVVEEAAVTQVDPASFTQQQLSVEKLIKEQNFTWKGIKGELGLEDSALESYYANAKFQSDCGDYVAAAAALKSYCDITQTPGVPGSGPNGMSALWGRLACEILVANWDGALTLLRELKSCIEFTNAPPLQQLQQRSWLLHWSLFVFFNHANGR-DELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEHEKHAYTDPVTEFLEGLQVSFDFDGAQARLVECERVLLSDFFLCNCADEFMEAARHFIFETYCRIHHKIDIGMLADKM 396
BLAST of mRNA_L-elsbetiae_contig536.13546.1 vs. uniprot
Match: A0A836CBR3_9STRA (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBR3_9STRA) HSP 1 Score: 413 bits (1062), Expect = 1.240e-138 Identity = 227/399 (56.89%), Postives = 276/399 (69.17%), Query Frame = 1 Query: 16 GAAPAA---TTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKTLNNTDEDPPDMVERRAEVFARMSALKEQAGILTEVFADKVAVEEASMTQVDHSTFTPQQLSVEKLIKEQNFTWKGIKAELELEDSALESFYANAKFQSDCGDYVTAAAALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGR*DELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGK----YVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKM 1191 GAA A +T + +DLTRTIS+YLDLH+MFPLLDFVEM+N+Y + V+QARLDLL+ TNM DYAME+Y+ L+N P +MV RR +VFAR+ LKE A L + D VAV +L EQ F W G+++E L DS L+S+ AKF DCGDY A AALK + + + G GS G ALWGRLACEIL N +GAL L+R++K IE+ +EQLQQRSWLLHWSLFVFFNHANGR DEL+ LFFEE F+QAIQTNCPWLLRYLVTAV+LT++ MRDL+RVLEQE+ +Y+DP+T+FLE L V+FDFDGA R ECE+VL DFFLC+ +EFMEAAR F FETYCRIH KID+ +LA KM Sbjct: 5 GAASAGGDGSTGADHDLTRTISEYLDLHLMFPLLDFVEMNNMYDSAGVSQARLDLLEPTNMVDYAMEVYQNLHNGAAAPKEMVVRRDKVFARLEELKEAASRLIAIVEDPVAVG--------------------RLENEQRFDWNGLQSEFGLPDSMLQSYADLAKFNYDCGDYKGAGAALKVF--LALSGGAAGS-QRGPSALWGRLACEILSNNSEGALALIRDVKAMIEYRGGSAIEQLQQRSWLLHWSLFVFFNHANGR-DELIALFFEEKFLQAIQTNCPWLLRYLVTAVVLTRSTGSTSSNKQAQTMRDLIRVLEQEQGSYSDPITQFLESLYVNFDFDGALLRRRECEQVLRRDFFLCSVCDEFMEAARLFTFETYCRIHRKIDVALLAAKM 379
BLAST of mRNA_L-elsbetiae_contig536.13546.1 vs. uniprot
Match: UPI001F04876B (eukaryotic translation initiation factor 3 subunit E-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04876B) HSP 1 Score: 317 bits (812), Expect = 1.840e-101 Identity = 176/384 (45.83%), Postives = 250/384 (65.10%), Query Frame = 1 Query: 43 SQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKTLNNTDEDPPDMVERRAEVFARMSALKEQAGILTEVFADKVAVEEASMTQVDHSTFTPQQLSVEKLIKEQNFTWKGIKAELELEDSALESFYANAKFQSDCGDYVTAAAALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGR*DELVTLFFEEP-FMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKM 1191 ++ DLT I YLD H++FPL++F+ + +Y ++V Q L+LL+ T M D AM+++K +N +E P +++E+RA+V + L+E++ +T++F D+ VE+A ++ F E + KE KG++ E A+E+ Y +KFQ +CG+Y +AA L Y + + P + ALWG+LA EIL+ NWD AL L LK ++ + P L+QLQ R+WLLHWSLFV+FNHA GR D L+ LF +P ++ AIQT CP +LRYL TAVI TK + V++DL++V+EQE +AY DP+TEFL+ L V F+FDGAQ +L ECE VL +DFFLC C +EF E AR FIFET+CRIH I IGMLAEK+ Sbjct: 2 AEQDLTSKIGCYLDRHLVFPLMEFLSVKQVYDENEVLQCILELLNNTKMVDLAMDVFKRINPDEEIPEELIEKRAQVVKELKQLEEKSEPVTKLFQDEEFVEKAQTSRDGKHLF-------EFIQKE-----KGVEYE------AVENLYHYSKFQYECGNYSSAADNLYFYRILAHH-----TEPKTVDALWGKLASEILMQNWDAALVDLDSLKEVVDQNHYPELQQLQLRTWLLHWSLFVYFNHAKGR-DLLIDLFLYQPKYLNAIQTMCPHILRYLTTAVITTKRR----RVVLKDLVKVIEQESYAYKDPITEFLQCLYVDFNFDGAQKKLRECETVLKNDFFLCGCIDEFRENARLFIFETFCRIHQCISIGMLAEKL 357
BLAST of mRNA_L-elsbetiae_contig536.13546.1 vs. uniprot
Match: A9SFG7_PHYPA (Eukaryotic translation initiation factor 3 subunit E n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A9SFG7_PHYPA) HSP 1 Score: 315 bits (806), Expect = 1.150e-100 Identity = 172/395 (43.54%), Postives = 250/395 (63.29%), Query Frame = 1 Query: 43 SQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKTLNNTDEDPPDMVERRAEVFARMSALKEQAGILTEVFADKVAVEEASMTQVDHSTFTPQQLSVEKLIKEQNFTWKGIKAELELEDSALESFYANAKFQSDCGDYVTAAAALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGR*DELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCN-----------CTEEFMEAARHFIFETYCRIHHKIDIGMLAEKM 1191 +QYDLT ++ +LD H++FPLL+F++ + +Y DQ+ +A+++LL TNM DYAM+I+K+L +T++ P DMV+RRAEV R+ L+E A L + V+E L +Q + + ++ ++ +E+ Y AKFQ +CG+Y A+ L Y + + + ALWG+LACEIL+ NWD A + LK I+ + A PL QLQQR+WL+HWSLF+FFNH NG+ + ++ LFF E ++ AIQTN LLRYLVTAVI+ K + V+++L++V++QE++ Y+DPVTEFLE L V++DF+GAQ +L ECE V++SDFFL +EFME AR FIFETYCRIH IDIGML++K+ Sbjct: 2 AQYDLTAAVAPFLDRHLVFPLLEFLQENQLYSDDQILKAKIELLAKTNMVDYAMDIHKSLYHTEDVPQDMVDRRAEVVGRLKVLEESAAPLISFLQNPALVQE--------------------LRSDQQYNLQMLQERYQIGSDQIEALYQYAKFQFECGNYSGASDYLYQYRTLCT------NSERSISALWGKLACEILMQNWDVATEEVNRLKETIDSKSFASPLSQLQQRTWLMHWSLFIFFNHDNGK-NGIIDLFFSERYLNAIQTNAHHLLRYLVTAVIVNKRR----RNVIKELIKVIQQERYTYSDPVTEFLECLYVNYDFEGAQQKLRECEEVIVSDFFLGKQLSENGFVTIPLRDEFMENARLFIFETYCRIHQCIDIGMLSQKL 365
BLAST of mRNA_L-elsbetiae_contig536.13546.1 vs. uniprot
Match: A0A5J4XZT5_9CHLO (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XZT5_9CHLO) HSP 1 Score: 313 bits (802), Expect = 2.570e-100 Identity = 172/384 (44.79%), Postives = 246/384 (64.06%), Query Frame = 1 Query: 43 SQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKTLNNTDEDPPDMVERRAEVFARMSALKEQAGILTEVFADKVAVEEASMTQVDHSTFTPQQLSVEKLIKEQNFTWKGIKAELELEDSALESFYANAKFQSDCGDYVTAAAALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGR*DELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKM 1191 +++DLT ++K +D H++FPLL+++ +YP DQ+ Q +LDLL+ TNM DYAMEI+ LNN D P ++ ERR EV + L+ QA + + +D+ V+ QL EK QN W ++ E + +++ Y AKFQ DCG+Y AA L Y ++ + + ALWG+LA EIL+ +WD A+ L +LK I+ N AP L QLQQR+WL+HWSLFVFFNH NGR + ++ LFF+E F+ AIQTN L+RYL A ++ K + VM+DLMR++EQE + +DPVT+FL+ L ++DFDGAQ +L+ECE+V+ +D+FL +C EEF+E AR FIFETYCRIH+ I++ MLA K+ Sbjct: 2 AEHDLTAKLAKSMDRHLVFPLLEWLSAKELYPEDQIQQGKLDLLNKTNMLDYAMEIFTQLNNRDP-PQELKERRTEVVQNLRKLQAQADSIVQFLSDESLVK---------------QLKQEKA---QNLPW--LQREHNIGSEQIDALYQYAKFQFDCGNYSEAAEFLYHYRTLST------NSERNLSALWGKLAAEILLQDWDTAMDSLTKLKSVIDDNNFAPLLVQLQQRTWLMHWSLFVFFNHENGR-NAIIDLFFQERFLNAIQTNAQHLVRYLAVAAVVNKRR----RNVMKDLMRLIEQESYQVSDPVTDFLQCLYTNYDFDGAQQKLQECEQVIDNDYFLTSCKEEFVENARMFIFETYCRIHNCIELKMLAAKL 353
BLAST of mRNA_L-elsbetiae_contig536.13546.1 vs. uniprot
Match: A0A7S0RIX6_9CHLO (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RIX6_9CHLO) HSP 1 Score: 311 bits (798), Expect = 1.580e-99 Identity = 173/388 (44.59%), Postives = 244/388 (62.89%), Query Frame = 1 Query: 31 ATTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKTLNNTDEDPPDMVERRAEVFARMSALKEQAGILTEVFADKVAVEEASMTQVDHSTFTPQQLSVEKLIKEQNFTWKGIKAELELEDSALESFYANAKFQSDCGDYVTAAAALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNA-PPLEQLQQRSWLLHWSLFVFFNHANGR*DELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKM 1191 A+ TSQY+LT I YLD H++FPLL+F+++ N +P ++V QA+++LL TNM D+AM+IYK LNNT++ P +M +RR EV ++ + +E A L + ++ V++ + + + Q+ K+ EQ +E+ Y+ A+FQ DCG+Y A L Y ++ S ALWG+ A +IL+ +W+ AL + LK I+ N PL QLQQR WLLHWSLFVFFNH NGR + ++ LFF++ +M AIQTN LLRYL AV++ K + +++DL+RV++QE + Y+DP+TEFLE L V +DF+GAQ +L ECE VL DFFL EEF+E AR FIFETYCRIH IDI MLAEK+ Sbjct: 2 ASPTSQYELTSKIGCYLDRHLVFPLLEFIQLKNTFPENEVLQAKIELLQKTNMVDFAMDIYKNLNNTEDVPQEMTDRRHEVVKKLKSSQEGAAPLVQFLSNGNLVKQLRQDKAYNLQYLAQE---HKIGAEQ-----------------IEALYSFAQFQFDCGNYSAAQEFLYHYRTLST------SNERSFSALWGKFAADILMQDWETALEDMGRLKEVIDAKNIFTPLNQLQQRMWLLHWSLFVFFNHENGR-NAIIDLFFQDKYMNAIQTNAHHLLRYLAAAVVINKRR----RNMLKDLIRVIQQESYTYSDPITEFLECLFVRYDFEGAQVKLRECEAVLKEDFFLNTVWEEFVENARLFIFETYCRIHQCIDIKMLAEKL 358
BLAST of mRNA_L-elsbetiae_contig536.13546.1 vs. uniprot
Match: A0A7S2SQG8_9STRA (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQG8_9STRA) HSP 1 Score: 311 bits (798), Expect = 2.270e-99 Identity = 173/386 (44.82%), Postives = 238/386 (61.66%), Query Frame = 1 Query: 43 SQYDLTRTISKYLDLHMMFPLLDFVEMSNI--YPADQVAQARLDLLDATNMSDYAMEIYKTLN-NTDEDPPDMVERRAEVFARMSALKEQAGILTEVFADKVAVEEASMTQVDHSTFTPQQLSVEKLIKEQNFTWKGIKAELELEDSALESFYANAKFQSDCGDYVTAAAALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGR*DELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKM 1191 ++YDLT IS+YLDLH+MFPLL+FVE + Y + +ARL L TNM DYA+EI+ LN EDP DMV +R EV+ ++ +K + L+ F + + A + Q+ + + I+ + ++ + +E++Y KFQ +CG Y A L + I + S G ALWG+ A IL WD AL ++ LK I+ P QLQQR+WLLHWSLFVFFNH GR D ++ F + ++QAIQ N PWLLRYL +AVI+ + G ++ L+RV+EQE+H+Y+DP+T+FLE L+V FDF+GAQ +L EC VLL D+FLCNCT+EF+++AR FIFETYCRIH KIDI MLAEK+ Sbjct: 14 ARYDLTPVISEYLDLHLMFPLLEFVESNEHLNYDKSDIQRARLAYLKPTNMVDYAIEIFHDLNPEVKEDPADMVRQRDEVYEKLGRIKTEHTKLSTFFQEMREGKYAG-----------------GFGEGQSLSLRWIQENIGVDQAGVENYYRYGKFQYECGLYEDACTVLSDFLSIDEYKIT--SSDLGFAALWGKFAALILQKQWDAALAEMQTLKKAIDERTTPDKLQLQQRTWLLHWSLFVFFNHHQGR-DLIIEAFLSDRYLQAIQINAPWLLRYLTSAVIINQRRRGE----LKALVRVIEQEQHSYSDPITKFLECLRVDFDFEGAQQKLVECTNVLLGDYFLCNCTDEFVQSARLFIFETYCRIHRKIDISMLAEKL 375
BLAST of mRNA_L-elsbetiae_contig536.13546.1 vs. uniprot
Match: A0A388K4K2_CHABU (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K4K2_CHABU) HSP 1 Score: 314 bits (804), Expect = 1.000e-98 Identity = 168/384 (43.75%), Postives = 243/384 (63.28%), Query Frame = 1 Query: 43 SQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKTLNNTDEDPPDMVERRAEVFARMSALKEQAGILTEVFADKVAVEEASMTQVDHSTFTPQQLSVEKLIKEQNFTWKGIKAELELEDSALESFYANAKFQSDCGDYVTAAAALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGR*DELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKM 1191 S+YDLT ++ +LD H++FPLL+F++ I+P D + +A++DLL TNM DYAM+I+K L NT++ P +MVERR EV + AL+E A L +F V++L E+ + + ++ ++ +E Y AKFQ DCG+Y AA L Y + + G+ ALWG+ A EIL+ NWD A+ + LK I+ + + PL QLQQR+WL+HWSLFVFFNH NGR + ++ LFF+E +M AIQTN LLRYL TAVI+ K + +++DL++V++QE + Y DP+TEFLE L V++DF+GAQ +L ECE V+ +D+F+ ++EF+E AR FIFETYCRIH IDI ML+ ++ Sbjct: 144 SKYDLTPKVAPFLDRHLVFPLLEFLQKEKIFPVDDIMKAKIDLLGKTNMVDYAMDIHKGLYNTEDVPQEMVERRVEVIGNLKALEEAAAPLI--------------------SFLQNPSMVQELRSEKQYNLQMLQERYQIGPEQIEGLYQYAKFQFDCGNYSAAADYLYQYRALCT------NNDRGVSALWGKFAAEILMLNWDAAMEEMNRLKEVIDSKSFSSPLLQLQQRTWLMHWSLFVFFNHENGR-NGIIELFFQERYMNAIQTNAQHLLRYLATAVIVNKRR----RNMLKDLIKVIQQEHYTYADPITEFLECLYVNYDFEGAQKKLRECEEVIATDYFISPFSDEFIENARLFIFETYCRIHQCIDIRMLSVRL 496
BLAST of mRNA_L-elsbetiae_contig536.13546.1 vs. uniprot
Match: A0A7D9DNC0_PARCT (Eukaryotic translation initiation factor 3 subunit E n=2 Tax=Alcyonacea TaxID=40677 RepID=A0A7D9DNC0_PARCT) HSP 1 Score: 308 bits (790), Expect = 3.730e-98 Identity = 172/384 (44.79%), Postives = 246/384 (64.06%), Query Frame = 1 Query: 43 SQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKTLNNTDEDPPDMVERRAEVFARMSALKEQAGILTEVFADKVAVEEASMTQVDHSTFTPQQLSVEKLIKEQNFTWKGIKAELELEDSALESFYANAKFQSDCGDYVTAAAALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGR*DELVTLFFEEP-FMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKM 1191 ++ DLT + YLD H++FPL++F+ + +Y +V Q L+LL+ T M D AM+++K ++ +E P ++E+RAEV + L+E++ +T++F D+ +E+A ++ F E + KE KG++ E +E+ Y +KFQ +CG+Y +AA L Y + + P + ALWG+LA EIL+ NWD ALT L LK ++ + P L+QLQ R+WL+HWSLFV+FNH GR D L+ LF +P ++ AIQT CP +LRYL TAVI TK + V++DL++V+EQE + Y DP+TEFL+ L V FDFDGAQ +L ECE VL +DFFLC C +EF E AR FIFET+CRIH I IGMLAEK+ Sbjct: 2 AEQDLTSKVGCYLDRHLVFPLMEFLSVKVVYDETEVLQGILELLNNTKMVDLAMDVFKRIHPDEEIPEGLIEKRAEVVKELKQLEEKSEPVTKLFQDEEFLEKAQTSRDGKHLF-------EYIQKE-----KGVEYE------TVENLYHYSKFQYECGNYQSAADNLYFYRVLAHH-----TEPKTVDALWGKLASEILMQNWDAALTDLDLLKENVDQNHYPELQQLQLRTWLIHWSLFVYFNHPKGR-DLLIDLFLYQPKYLNAIQTMCPHILRYLTTAVITTKRR----RVVLKDLVKVIEQESYTYKDPITEFLQCLYVDFDFDGAQKKLRECEAVLKNDFFLCGCIDEFQENARLFIFETFCRIHQCISIGMLAEKL 357
BLAST of mRNA_L-elsbetiae_contig536.13546.1 vs. uniprot
Match: F0XWU6_AURAN (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWU6_AURAN) HSP 1 Score: 308 bits (788), Expect = 6.040e-98 Identity = 177/383 (46.21%), Postives = 228/383 (59.53%), Query Frame = 1 Query: 43 SQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKTLNNTDEDPPDMVERRAEVFARMSALKEQAGILTEVFADKVAVEEASMTQVDHSTFTPQQLSVEKLIKEQNFTWKGIKAELELEDSALESFYANAKFQSDCGDYVTAAAALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGR*DELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKM 1191 S+Y++T+ IS +LD H++FPLLDF+E + Y A V +ARLDLL TNM DYA+EI L + + + + AR A K Q + EV D AVE+ T+T L + I N+ ++ AKF +CGDY A L Y + G +G ALWG+ E+L+ NW+GAL L L+ I+ APPLEQLQQRSWLLHWSLFVFFNHA G D ++ LF E ++QAIQTNCPWLLRYL TAVI+ K + ++DL+RV+ E DPVT+FLE L V FDF+GAQ L EC++ L SD+FLCNC + FME AR F+FETYCRIH KIDIGML++K+ Sbjct: 17 SEYEVTQKISPFLDAHLVFPLLDFLEENTSYEAGSVQRARLDLLAPTNMVDYAIEIRSALGDANAALVEGAPSVEAMEARRDAAKVQR--VAEVLEDAEAVEQMKRD----GTYTAADLEAKHGIGPANWA----------------DYFEFAKFLYECGDYEGARDMLDHYLALCFPAGKK-LDASGFRALWGKFGSEVLLKNWEGALHDLGRLRAAIDDFGAPPLEQLQQRSWLLHWSLFVFFNHAKGH-DGIIDLFLNEKYLQAIQTNCPWLLRYLTTAVIINKRR----RSTLKDLVRVITMEHDLKADPVTQFLECLYVKFDFEGAQRTLAECDKALRSDYFLCNCADAFMEDARLFVFETYCRIHTKIDIGMLSDKL 371 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig536.13546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig536.13546.1 >prot_L-elsbetiae_contig536.13546.1 ID=prot_L-elsbetiae_contig536.13546.1|Name=mRNA_L-elsbetiae_contig536.13546.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp MSEAVGAAPAATTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVback to top mRNA from alignment at L-elsbetiae_contig536:210..5462- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig536.13546.1 ID=mRNA_L-elsbetiae_contig536.13546.1|Name=mRNA_L-elsbetiae_contig536.13546.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5253bp|location=Sequence derived from alignment at L-elsbetiae_contig536:210..5462- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig536:210..5462- >mRNA_L-elsbetiae_contig536.13546.1 ID=mRNA_L-elsbetiae_contig536.13546.1|Name=mRNA_L-elsbetiae_contig536.13546.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig536:210..5462- (Laminarionema elsbetiae ELsaHSoW15)back to top |