mRNA_L-elsbetiae_contig5355.13538.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig5355.13538.1
Unique Name	mRNA_L-elsbetiae_contig5355.13538.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 5.630e-49
Identity = 109/197 (55.33%), Postives = 122/197 (61.93%), Query Frame = 1

Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKV------------------KGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLAKLEMPDTLMPL-----------------------------------------ITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRREAER+VEAGVV VNG  VQT ALNVGP+D+VKV                  +G+ LER   HTPKLWMVHK+RNELVTRH+PEGR TVF+RL KL++PDTLMP+                                         ITEE+L  MRSGCTIDGVRYKGMFVRV  GGGKG  GRNAWLTI+CTEG
Sbjct:  126 SRREAERMVEAGVVMVNGATVQTPALNVGPRDIVKVNVGLFQQPGNGTDCFTFVQGKVLERPESHTPKLWMVHKMRNELVTRHDPEGRPTVFDRLTKLKLPDTLMPVGRLDYNTEGLLLLTNDGDLARKMELPSSNIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEG 322

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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A6H5JGT0_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT0_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.180e-35
Identity = 91/282 (32.27%), Postives = 150/282 (53.19%), Query Frame = -2

Query: 4963 GEEPVLSKKKTTNWAPAMKILGYRVDTEDLTLGLPVRKVEAIRALLR-RWPQGRKEATVEEMLSLAGKLHHAAFVIQPARYYVRRLLQLTNLHLSGSEKAGSGEAWGMHRKLKEKKRKLKLTPEFMADLGWWRLFLGREGCRVGDMITSPAFTFVEQKPVRLLFADASLRALGGSCGVKRVYWRWNLPDEIVQRTVACNPKMEGDRIPINV*EVVAAVINVHGMIRRTRDRPEREGDAVLIRADNASTVSRVMKCRGRKGKEFAGE*VGALMRILGPTSVSG 5805
            GE P+L+ KK++NW   ++ LG+ +D+  L + L  +K EA++  L   WP+ ++EAT +E+ S+AGKL +  +V++  +Y+V RLL+LT LH   +                     ++L  EF  DL ++R  +  E    G+ + +P +  V+++P RL  +DAS  A+GG C  KRV+WR++LP +          + E   + IN+ E+V  V+    M     DRP+   D VL+R DN + V+   +C G + K         +MR+LG   +SG
Sbjct: 1218 GETPILAPKKSSNWDTQLEYLGFVIDSHKLKISLTTKKAEALKTALEIDWPRHKREATAQEVFSIAGKLWNLTYVVRAGKYFVWRLLRLTGLHRKHTRNCS---------------HVVELGREFHDDLDFFRWAIEHELLTAGESLNAPCYGVVKRQPKRLYLSDASFDAIGGFCPEKRVFWRYDLPLDFATELKQKAARRETCSVTINLLELVGMVMTAWVMHSLVGDRPKNNNDPVLMRGDNMAAVTWSNRCGGARDKRAC-----LMMRMLGRLEISG 1479

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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A6H5JHQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ2_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 7.080e-35
Identity = 75/151 (49.67%), Postives = 101/151 (66.89%), Query Frame = -2

Query: 4981 MADLGWWRLFLGREGCRVGDMITSPAFTFVEQKPVRLLFADASLRALGGSCGVKRVYWRWNLPDEIVQRTVACNPKMEGDRIPINV*EVVAAVINVHGMIRRTRDRPEREGDAVLIRADNASTVSRVMKCRGRKGKEFAGE*VGALMRILG 5433
            MA++GWWR +LG     VG  IT+ +F+F +Q P R  F+DAS RALGG C   RV+WR+ LP+E+  RT+    K EGD I IN  E++A V+  + M+    DRPEREG+AV++RADN + VS V KC G  GK+ A   +GALMR++G
Sbjct:    1 MAEVGWWRWYLGGGAGEVGRKITAASFSFAKQVPSRSWFSDASTRALGGVCMETRVFWRYELPEEVQGRTIRARQKGEGDFICINELELMAMVMTTYVMVISRGDRPEREGEAVIMRADNQNAVSWVKKCGGA-GKKKAR--IGALMRVIG 148

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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A6H5J9J6_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9J6_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.690e-26
Identity = 68/125 (54.40%), Postives = 78/125 (62.40%), Query Frame = 1

Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVK------------------------------------GRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLAKLEMPDTLMPL 429
            SRREAER+VEAGVV VNG  VQT ALNVGP+D+VKV                                     G+ LER   HTPKLWMVHK+RNELVTR +PEGR TVF+RLAKL++PDTLMP+
Sbjct:  126 SRREAERMVEAGVVMVNGATVQTPALNVGPRDIVKVNVGLFLQLGNGADYRFFVQVDFDALLLCLSYLSDTALGKVLERPESHTPKLWMVHKMRNELVTRDDPEGRPTVFDRLAKLKLPDTLMPV 250

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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A1X6Z3Y8_9RHOB (Pseudouridine synthase n=3 Tax=Roseovarius TaxID=74030 RepID=A0A1X6Z3Y8_9RHOB)

HSP 1 Score: 87.4 bits (215), Expect = 8.230e-15
Identity = 61/177 (34.46%), Postives = 82/177 (46.33%), Query Frame = 1

Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVKGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLA------------------------------KLEMPDT---------LMPLITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRREAERL+EAG VTVNG  +  +ALNV P D V V GRALE       +LW+ HK    + T  + +GRAT+++ L                               KLE+P T         +    T+     +R G T+DG R++GM V +         G NAW+T+   EG
Sbjct:   22 SRREAERLIEAGRVTVNGVKITRAALNVTPADKVVVDGRALE--APEPARLWLYHKPTGLVTTNRDEQGRATIYDDLPADLPRVMSVGRLDLNSEGLLLLTNDGGLKRKLELPSTGWLRRYRVRVNGRPTDATFEPLRKGLTVDGERFQGMMVSLDR-----QQGANAWITVSIREG 191

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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A6H5L2H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 3.210e-14
Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = -2

Query: 4963 RVYWRWNLPDEIVQRTVACNPKMEGDRIPINV*EVVAAVINVHGMIRRTRDRPEREGDAVLIRADNASTVSRVMKCRGRKGKEFAGE*VGALMRILGPTSVSG 5271
            R +WR+ LP+E+  RT+    K EGD I INV E++  V+  + M+    D+PEREG+AV++RADN S VS V K  G +GK+ A   +GALMR++G     G
Sbjct:    4 RGFWRYELPEEVQGRTIRARQKGEGDFICINVLELMTMVMTAYVMVISRGDKPEREGEAVMMRADNESAVSWVKKW-GWEGKKKAR--IGALMRMMGALKTIG 103

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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A3M2E3L3_9PROT (Pseudouridine synthase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M2E3L3_9PROT)

HSP 1 Score: 83.6 bits (205), Expect = 1.990e-13
Identity = 60/177 (33.90%), Postives = 83/177 (46.89%), Query Frame = 1

Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVKGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLA------------------------------KLEMPDT---------LMPLITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRREAERL+EAG V+VNGT + + ALNVGP D ++V GR +       P+LW ++K    + T  + +GR T+F+ L                               +LE+P T         +    T+E L  +R G  IDG R+K M V +         G NAWLT+   EG
Sbjct:   35 SRREAERLIEAGRVSVNGTVITSPALNVGPDDRIEVDGRPIA--APEPPRLWRLYKPTGIVTTARDEKGRKTIFDILPPDMPRVMPVGRLDINSEGLLLLTNDGEIKRRLELPSTGWVRKYRVRVKGRPTDEMLEPLRKGLEIDGERFKPMDVTIDR-----QQGANAWLTVGIREG 204

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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A058ZIG0_9RHOB (Pseudouridine synthase n=1 Tax=Actibacterium atlanticum TaxID=1461693 RepID=A0A058ZIG0_9RHOB)

HSP 1 Score: 82.8 bits (203), Expect = 2.780e-13
Identity = 60/177 (33.90%), Postives = 83/177 (46.89%), Query Frame = 1

Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVKGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLA------------------------------KLEMPDT---------LMPLITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRREAER++EAG VTVN   + + ALNV  QD + V G+AL       P+LW+ HK    + T  + +GR TVF+ L                               KLE+P T         +    +E+ L+ +R G TIDG R++GM + +         G NAWLT+   EG
Sbjct:   22 SRREAERMIEAGRVTVNSERIFSPALNVTAQDKIVVDGQALAEA--EPPRLWLYHKPAGLVTTARDEKGRETVFDALPEGMPRVMSVGRLDLNSEGLLLLTNDGEMKRKLELPSTGWLRKYRVRVRGYPSEDTLAPLRKGVTIDGERFQGMQISLDR-----QQGANAWLTVGLREG 191

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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A350AJK0_9RHOB (Pseudouridine synthase (Fragment) n=2 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A350AJK0_9RHOB)

HSP 1 Score: 84.3 bits (207), Expect = 4.590e-13
Identity = 61/177 (34.46%), Postives = 82/177 (46.33%), Query Frame = 1

Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVKGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLA------------------------------KLEMPDT---------LMPLITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRR+AE+LVE G VTVNG PV + A NVGP+D V V GR L+       +LW+ HK    + T  + EGRAT+F++L                               +LE+P T         +    T+E  + +R G T DG  ++ M V +         G NAWLTI   EG
Sbjct:   22 SRRDAEKLVEEGAVTVNGKPVTSPATNVGPKDRVAVNGRVLDP--PEPTRLWLYHKPTGLVTTAKDEEGRATIFDKLPADMPRVMSIGRLDINSEGLLLLTNDGDLKRRLELPSTGWLRKYRVRINGRPTDETFAPLREGITTDGETFQPMSVSLDR-----QQGANAWLTIGLREG 191

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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A3VHQ4_9RHOB (Pseudouridine synthase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A3VHQ4_9RHOB)

HSP 1 Score: 82.4 bits (202), Expect = 6.140e-13
Identity = 59/177 (33.33%), Postives = 82/177 (46.33%), Query Frame = 1

Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVKGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLA------------------------------KLEMPDT---------LMPLITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRREAER++EAG V+VNG  + + ALNV P+D + V G  +E+     P+LW+ HK    + T  + +GR TVF++L                               KLE+P T         +     E  L  +R G T+DG  ++GM V +         G NAWLTI   EG
Sbjct:   49 SRREAERMIEAGRVSVNGKVIDSPALNVTPRDKITVDGTLVEK--PEAPRLWLYHKPTGLVTTERDEKGRETVFDKLPEDMPRVMSVGRLDLNSEGLLLLTNDGGIKRKLELPSTGWVRKYRVRVNGKPEEAVLEKLRKGITVDGEAFQGMSVTLDR-----QQGANAWLTIGLREG 218

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDE8_ECTSI	5.630e-49	55.33	RNA pseudouridylate synthase domain-containing pro...	[more]
A0A6H5JGT0_9PHAE	2.180e-35	32.27	Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JHQ2_9PHAE	7.080e-35	49.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J9J6_9PHAE	1.690e-26	54.40	S4 domain-containing protein n=1 Tax=Ectocarpus sp...	[more]
A0A1X6Z3Y8_9RHOB	8.230e-15	34.46	Pseudouridine synthase n=3 Tax=Roseovarius TaxID=7...	[more]
A0A6H5L2H9_9PHAE	3.210e-14	45.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A3M2E3L3_9PROT	1.990e-13	33.90	Pseudouridine synthase n=1 Tax=Alphaproteobacteria...	[more]
A0A058ZIG0_9RHOB	2.780e-13	33.90	Pseudouridine synthase n=1 Tax=Actibacterium atlan...	[more]
A0A350AJK0_9RHOB	4.590e-13	34.46	Pseudouridine synthase (Fragment) n=2 Tax=Rhodobac...	[more]
A3VHQ4_9RHOB	6.140e-13	33.33	Pseudouridine synthase n=3 Tax=Roseobacteraceae Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5355	contig	L-elsbetiae_contig5355:1543..8825 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	4
Model size	752
Cds size	261
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5355.13538.1	prot_L-elsbetiae_contig5355.13538.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig5355 7292..8351 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816556.629258-UTR-L-elsbetiae_contig5355:1542..1715	1622816556.629258-UTR-L-elsbetiae_contig5355:1542..1715	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig5355 1543..1715 -
1691683645.2344398-UTR-L-elsbetiae_contig5355:1542..1715	1691683645.2344398-UTR-L-elsbetiae_contig5355:1542..1715	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig5355 1543..1715 -
1622816556.6622453-UTR-L-elsbetiae_contig5355:8351..8396	1622816556.6622453-UTR-L-elsbetiae_contig5355:8351..8396	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig5355 8352..8396 -
1691683645.2724078-UTR-L-elsbetiae_contig5355:8351..8396	1691683645.2724078-UTR-L-elsbetiae_contig5355:8351..8396	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig5355 8352..8396 -
1622816556.6737819-UTR-L-elsbetiae_contig5355:8552..8825	1622816556.6737819-UTR-L-elsbetiae_contig5355:8552..8825	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig5355 8553..8825 -
1691683645.2814105-UTR-L-elsbetiae_contig5355:8552..8825	1691683645.2814105-UTR-L-elsbetiae_contig5355:8552..8825	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig5355 8553..8825 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816556.64031-CDS-L-elsbetiae_contig5355:7291..7441	1622816556.64031-CDS-L-elsbetiae_contig5355:7291..7441	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig5355 7292..7441 -
1691683645.247014-CDS-L-elsbetiae_contig5355:7291..7441	1691683645.247014-CDS-L-elsbetiae_contig5355:7291..7441	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig5355 7292..7441 -
1622816556.6508894-CDS-L-elsbetiae_contig5355:8240..8351	1622816556.6508894-CDS-L-elsbetiae_contig5355:8240..8351	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig5355 8241..8351 -
1691683645.2635922-CDS-L-elsbetiae_contig5355:8240..8351	1691683645.2635922-CDS-L-elsbetiae_contig5355:8240..8351	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig5355 8241..8351 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig5355:1543..8825-
coding sequence from alignment at L-elsbetiae_contig5355:1543..8825-

protein sequence of mRNA_L-elsbetiae_contig5355.13538.1

>prot_L-elsbetiae_contig5355.13538.1 ID=prot_L-elsbetiae_contig5355.13538.1|Name=mRNA_L-elsbetiae_contig5355.13538.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp
MVHKIRNELVTRHEPEGRATVFNRLAKLEMPDTLMPLITEEELSGMRSGC
TIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG*

mRNA from alignment at L-elsbetiae_contig5355:1543..8825-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig5355.13538.1 ID=mRNA_L-elsbetiae_contig5355.13538.1|Name=mRNA_L-elsbetiae_contig5355.13538.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7283bp|location=Sequence derived from alignment at L-elsbetiae_contig5355:1543..8825- (Laminarionema elsbetiae ELsaHSoW15)
GGGATGCTTTCCTGGGGATGGAGGAGGATAAGGAGGAGGAGAAGCGCAGC
GCCTTCGGCGCGGGCAAAAGCGAGGGGGACGTGGACGAGGTGCTGCGGTC
GTAGATTAAGGACCATTTCATGATGCGCCTGTCTCGCCGCATCGCGAGGT
CCGGCATGGGGGTCCCGTCGAGAGGCCGAGCGCCTGGTGGAGGCGGGGGT
GGTGACGGTGAACGGAACACCGGTGCAGACCTCGGCGCTGAACGTGGGGC
CCCAAGATGTCGTCAAAGTCAAGGTCAGGTTAGGCTTTGGTACCGCTACG
ATTTTTCCCTTCGTCCAGTTAATTTTCTGTTTGCTTGTTTGTTTGTGTGT
GTCGGACGGTCCCGTGCTTGTTTTGTTTTTTTAACGTGACGTGCCGTCGT
CTGTCAATGTCGATGTTGATGACCGCCAGGGGAGGGCACTGGAGCGGCTG
GGGCACCACACGCCCAAGCTGTGGATGGTGCACAAGATTAGGAACGAGCT
CGTCACGAGGCACGAGCCGGAGGGGCGGGCGACCGTGTTCAACAGGCTGG
CCAAGCTCGAGATGCCCGACACGCTCATGCCGCTGGTGCGTGCAAAATAT
GTACAGGGTGCCTAGTGCGTTTAGCGCGGGGGGGGGTGTATGGCGCGCGT
ACACGTGCAGCGGTTACTTTAATTTAAGCCTGGTGTGTGCTCCCGTTTGT
GTATTCCGTATGCGGCGCCACCATTTTCGACGATATATTCGTAGATTCTA
CGAGCATGTTGGCTCGCTCTCATCCACGCACTGCAGTCCTGCTGGTGTTG
GATTTGCCGCGGTTTTTGATCTGATTTGGAAAACGTTTTTGACTTTGGCT
TGGGTTGACCCCGTGTTACGTAGTAGGGCCTTGTGCCGGAGAACGCCATG
AAGGCTCGTCAGTAGGTTTCCATATGTCGACAGCAGCGTCGGGCCGGCTC
TCTGTCAATTTGATTTCGCTCCGTGGCGGAAAGGGGAAAGGAGGGGGGGC
GTACCCGAGACTTTCACAGCGGAGATGGATCAGCACTTGGAAAGGAATAC
CGATGGCACTGCTACCTTCTTGGTCGCGCGCGCACATACATCTGGTTTCT
GCCGTATTTTGTATTCGCCGTTGAAATTAAAGGCGTCTGTTTTGCCATCG
TTAGAGTCGTGGTAGGCTGGGTGCTACAGAGCTGTACAGATATGCATTGG
TTCCTCAGCTGTGGCTGGACCATGTTTTGTTTCTAGACCGCGTCTTCGTA
CTGAGTCGTGTGCCAAGAGGCTAAGACGTTTTAGTAACTGCTGTAATGAC
AGCTGTAGGTCGGGTGGACTAATGGTGTGTTTGTTTCCTCACGGTTCTTG
GTTGATGGTGGACCATTCTTGCTTCACCGCGCAGATAACGGAAGAGGAGC
TGAGCGGCATGCGGAGCGGCTGCACCATCGACGGAGTCCGGTACAAGGGC
ATGTTCGTGAGAGTCGGGACGGGTGGCGGCAAGGGGACGGGGGGCCGCAA
CGCCTGGCTGACCATCAAGTGCACCGAGGGATAAGTGAGTGTGTGTAGAC
GATAGCTCGTTTGCCTTGTCGACAGCTGTTTGGCTGTAATTTATGCGTTT
TCCTAATAGAGGGGTGCCCCCCCGGACTTGCCTCAGAAGATACCATGCCG
ATGTGGTGTAGCTCAAAATGCGGCTGAAAACTGATTTTCAACTTCCGGTG
CATATGTACGTACACACGTAGTAGTGACTGAGACAACAAAATCCACCACC
CCCACAGTTTGGCTATCTCTCTTCTCCTCCCCTGTCAGCCTTCTCCCACA
AGCTGTTGCTTCTGTTCATACATATGATGCATAGACAGGTAAGTGCAGTA
AAAGCAGGGCTCTATACGGTGCCTTTTCTCACGGTTACACCGCACCGCGG
TGCCGTTCTGAAAACCGCGCCGCACCATGATATTTCGAAGCAGCGGTTAA
CCGCACCGTGAAAAACCGTAACATTTCAAACAGCGGTTAAGCGCACCAGA
TGAAAAACTGTGAATTTAGGGACAGCGGTTAAACCGCACCGCGCCTTACG
GTAGGTATCTGAAAAAAATGAAGCTGAAAAATCAGGGTAATCGCCGGGCC
TGTGTTTTGGGACGGGAACAGTTTTGGCGGTACCGCGGTACCTGTTATTG
CGGGGGTACCGCCTTTGGTGGTTGCCAGTACCGCGAATAATGGCGGGACC
TTCGTCGGTGGTTCGCAATATGGCGGTGTCACCTTCGGCGGGAAGCGGTA
GTACCAAGTATGGCCGTAAACCGCTGGCGGGAACACAGTTCGTTCGGTGG
CCAAATGTTTCAGCGATTTGTTTTTTTAGTTTTCCGGCGGTATCCGACGC
CTAGACACAGACATTTCTGTGGCTTCCGAAGAAACGGCAAACCTCTTCCC
GACGATGTCACCAAAAAACACACAAGAACCCCCCCCCCCCCTCCCACCCC
CGAAGGGGCCCTCCTTTTTTTCTGTAACCCTTTTTGAAGGGACTACAAAA
AGGAGGGAGGTGTTGGGNNNNNNNNNNAAACCTATAAGCGACAGGGACAC
AAAAACGCACACAAAAACCCCTCCCCCCACACCCCCCAGAGAACCCCCCC
CCAAAAAAAAAAAAAAGACGAAGGGAAATGCAAATCATAACGATGCAGGT
TTGGACGCGACGTACTCTCTCTGTTAAACTACCGGCGTCCTGCTGACCAT
GAGAGGTTCATTATTTTTTGTCGGTACCTTTTTGTGAGGGTACTGCAATA
TGGCGGTACTGTTTGGGTGGTACTACAACATGGCGGGAATTTTCGGCGGG
AAGCGGTACTTGGCTTTTCGGCGGTACTTTTTCGGCGGGTTGGCAATATG
GCGGTAATTTTTCGGCGGTTAGTGGTTTCTGTTTTTTCGGCGGTCAGGCC
TTTGGCGGTTGCCAGTTTGTGGGAATCCCGCCTACCGTGGGCGGGAAAAC
ACATCGGGAAAATTCCCGACGAATACCCCAGAAAATATCAAGCGGTGCAA
AACCTTGCGCACCGGTTGTTGTAAGGGGCGGTTTTACGTACACCGTACAA
CAACTGTTCATAAAACCGCCCTCGGTCACGATTTTGTTCACGGTATTTTC
GAACATTTACGGTTCCGATTAACTTATAAACCCGACAATTACGGTTCTGG
ATAACCTATAAACTGACATTACGGTTTCGAATATCATATAAACCGTAGAT
TATGCTCTAGATGTGGATGATAAAGGAATTCTACATGCGTTTACACACAC
ACCAGCATACACCACACAACCGTGTGCGCTGCGCTCGCTCCGTGCACGCG
ACACCGCTATAGCTCGCGGACCCCAGATGGCGGAAACCACTGCTACCAGT
CATGCCAAACCTCAGGGTCTGGGGCCGGATCCCCCACACCCGACAACACA
ACTACGAACCCCCCCTGTGAATGGTGCCACCGCACCTTCCTAGCCGCCTA
ACCCTACCGGCGTCACGCTGAAGAGCATTCAAGCCACAGTTGTCCACGTT
GCAACCGATGTTAAACCTGAAAACAACTCCGGTGTTTGGGCATACTTCGT
ACTTCACTTAGTTCGCCAAGGCAGTGAACGACAATAGGGAAAAGTATCTG
GTGTGAGGTTCAAACACCGGCGGGAGAGATCTGCCGCTCTGAGTACAAGG
AAACATCAGCGAACCGTATGGATTTTGGTGGTTAACGGTGAAATTTCGGC
GTTTTTTCCCCACGGCGGTGCACCGTGTGATTTTGATACCCATTTTCACG
AAATTTGCCTTGTATTAACCTTTCCCTTGAGGGCCAATGGGGGAGCCCCC
CCCCCCGCCCCATCCTCCAAGGAAAGGAACGAAACAGCTGACCCTCCTTC
TGAAAGGACCGGTTGCTGCTTCTCCGAACAGCTACTTCTCCTTTTCCAGA
ACAAGTTACTGCTCTCCCCGTCGTTTCCCCATCCAGCGTGAAATTCTGGG
AGGGTGGGCGGGAGACAACAATATACCGAAGAATGGTTCCGTTGTATGGG
CCTGCTCCATCGCACGACAGTTCCTCATACTACGATATCCTCCATCCCCA
GCATCTAAAGGACAGGTTCCGTATCCCGGTATCGTCCTTATTAAATGGAT
TGTTCCGTTTGATACAGCATCCTCCCACCCTTGTCAACAGGACCAGAAAT
GGTTCCGTACCACGGCATCCTCCCTATGGATTGTTCCGTCTGATACGGTA
TCCTCCAAATTTGGCCCACTGTAGGACAGGTTCCGCATCCCGGCATCCTC
CCTCAATGGATAGTTCCGTTTGATACAGTGTCCCCCCACCCTTGTCAACA
GGACCAGAAAATGATTCCGTATTGTCGGCATGCTCCATCCTCAGACGGTT
CCAGACACTACGATATCCTCCATTCTCGACCCCGCTACAGAATAAGTTCC
GTACCACGGCATCCTTCCCTAAATGGATTGTTCCGTTAGATACTGTATCC
TCGCGTCCTTGTCAACAGTACCATAAAAAGGTTTGAGCCCCCCTATACAT
TGGTTCCGAATACTCCACATTATTCCGTTCTAACCGGTTCCGTGTTTCTG
CCTGCTCCACCCTGACCAGATAGACCCCGACACCATAGACCCCTTTCCAA
CGCCCGAAAATAAATCCCATTTTCAAATCCTCCCCTTTCCAAGACCCAAA
CATTTAATATACCCATTTTCAATCCAGCAACCCACCCCTTTCCCAGACCC
AAAATTTAACATACCCATTTTCACATCCAGGGAGGGTGGGTGGGAAAAAG
AAAGAGCGATGGCCAAAAACGGGTACGCCCGAATGGTATCCGGCCAGAAA
CGGGTACCCTATTGAATATAACCAATGAAAGTTCCCGCCCCGTACCCAAT
CCTGGCCGCATTTCCGCCGGGTACACCCGAATCTGGCTATTCAACCCTCG
AAGTCGTACCCGGTTCTCTTTACCCGTACCCGATTATAGCCACAGCAGAC
TACTCAAACAACAGCCCACACACGCACAAGCGCACGACTTTTTTTCTTCC
TCGGCGTCGAGTTTGCCTTGCTTTGTGACCAAGGGCCCCCAAGGATGTTT
TGGACTAGAGAGCTATTGCGAGAAACAACAACATCGACAATGCAGCCGCG
TCACCGCGGTGGCCACGCCAAGGCGCGGCAGAACATAATCATAGTATTAG
GGGCAAGAACTTGACCACCGAACCGATCATGAGTGATGGTGTTCGCCATG
GACAACGACGACGTCAAAGGCTCTAATGATACATACACGACAGATGATGA
CGGTTCCGAAACTCCAAAGGCTCACATGGTCCGGGGAAACTTTCCGTGTG
GAAGTACTAAGGTACCCGTTCTTGGCCGGGTACCGTTCGGGTGTACCCGT
TTATGGCCATTGCCCTAAAAATAACCAGGAAAAAATCGCATGAACGCAAG
TCTCCCTTCTGCGCCGTCTCTCTCCTCCTCGCTCCCGCCCTTGCTCTTCT
TCTCTCCTTCTTTCAACCGCTTTCTTCTCTCCTCGCTTTGGTTTCGATAA
TTGTCGTGCGTGTGCGTGGTAACTCGCGGGCCTTCCTTCTAGACTTTAAA
CAGTCCTGAGATCTTTCTTTGTTGCTGAAATTCCGGCCCTTCCCATCGAA
ACACCAGGTTGTACTCATCCAACCTCGACTTCCGTACAACCTTTACTTTT
GACATCCATTTTCACGAAATTTTCCTTTCATTAACCTTTCCCTTGAGGGG
CAATGGGGGAGCCCCCCCCCCCCCACCCCATCCTCCAAGGAAAGGGAGGA
AACAGCTGACCCTCATTCTGAAAGGACCGGTTGCTGCTTCTCCGAACAGC
TACTTCTCCCGTTCGGAAGCAGTTTCCTCTCTTCAACGCATTTTATTTTT
ATTTTTATTTGAGCACCGTCCCTTGTCCCGGCTGCCTCTCATACTCCCCC
GCCCTCGCCTCCAACACTCCGGATACCGATGTTGGCCCCAAGATCCTCAT
CAAAGCCCCCACTCACTCTCCGGCGAACTCCTTCCCCTTCCTGCCCCGAC
ACTTCATCACCCGTGATACCGTCGACGCATTATCCGCCCTTATTAGTACA
GCATCTCCTTCCCTCTCCGGTCTGTCCCTCGTCCTCCGGATCATCCCGTG
TACGTTTATGACTGCCGCGACCACCTCCTAAACGTTGATCGGAATGCGAT
CTCCTTCCATCTTTGGGTTGCATGCTACCGTTCTCTGCACGATCTCATCT
GGCAGGTTCCATCTCCAATAGACTCTCTTCACCCCACATGAACCCCCCAA
CGCCCGCAACGACGCGTCCGCAAACAACAGCCTCACTGGCTTCTGCTCCA
CGAAAGTGAACGCTGGAGATGTTATCATATCCCCTACTCTACACCCTTCC
CTCCCCAAAAATAACCTCCACCATCCCAGATCTGCCATAAACTCCGGGGT
CAACTTCAGCTTCCTCTTCTTCTCTTTCAACTTCCTATGCATACCCCAAG
CTTCCCCGCTGCCCGCTTTCTCGCTCCCACTCAGATGCAGATTCGTAAGC
TGCAGAAGCCTGCGTACGTAGTACCTCGCAGGCTGAATCACGAAAGCGGC
GTGATGAAGCTTCCCTGCCAACGACAACATTTCCTCGACCGTGGCCTCCT
TCCGACCTTGCGGCCACCTCCTCAACAATGCACGGATGGCCTCCACCTTC
CTCACCGGCAACCCTAGCGTCAAATCCTCCGTGTCCACCCTATACCCCAA
AATTTTCATCGCAGGCGCCCAGTTTGTAGTCTTCTTTTTCGACAACACCG
GCTCCTCCCCCTCCCCCCTCATGTTGGTTTGTCGTTGGTGTAGAATATGT
TTGCAGTACGCGTATGTCTTGGCCGGGCGGTCTGTTTGCTCTTCAGGTAC
CTTTCCTCCCGCATGTAGCGTTTGCGGTGCACTGGTTGCCATGTGCCGAA
CTTAGCCCCTATATTGTACATCCTTGGGCTTGTAGTCTCGCCTGCAATGC
CGAGGTGGAGCTTGCATTCGGGCTCGCTCGTCATCTGCGTTTGGTCCCAT
CGATGATTCCCTCGTGTGAATGTGTGTCTTTCTCTTTTTTTTCTTGTGCG
TGTTTCGATTGGCTCTTGCCGTCCATTTCATGTACCGGTTCTCCCGTTGC
ATATTTGAAGGTCCGCGATGTTGAGGGCCAGCTAGCCTTTGGGGTGCCGG
AGGAACGCCTGGCCGGGCACGCCTTCCACACCTATAGCCTCGATACCAAG
GACAGAACGTGAGAGCCAAGATGCATGGTCCCTGTTATACAAATATGATA
GCAATTTACAATTTACAGCGTGCTTGGGCGGAG

Coding sequence (CDS) from alignment at L-elsbetiae_contig5355:1543..8825-

>mRNA_L-elsbetiae_contig5355.13538.1 ID=mRNA_L-elsbetiae_contig5355.13538.1|Name=mRNA_L-elsbetiae_contig5355.13538.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=522bp|location=Sequence derived from alignment at L-elsbetiae_contig5355:1543..8825- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGCACAAGATTAGGAACGAGCTCGTCACGAGGCACGAGCCGGAGGG
GCGGGCGACCGTGTTCAACAGGCTGGCCAAGCTCGAGATGCCCGACACGC
TCATGCCGCTGATGGTGCACAAGATTAGGAACGAGCTCGTCACGAGGCAC
GAGCCGGAGGGGCGGGCGACCGTGTTCAACAGGCTGGCCAAGCTCGAGAT
GCCCGACACGCTCATGCCGCTGATAACGGAAGAGGAGCTGAGCGGCATGC
GGAGCGGCTGCACCATCGACGGAGTCCGGTACAAGGGCATGTTCGTGAGA
GTCGGGACGGGTGGCGGCAAGGGGACGGGGGGCCGCAACGCCTGGCTGAC
CATCAAGTGCACCGAGGGATAAATAACGGAAGAGGAGCTGAGCGGCATGC
GGAGCGGCTGCACCATCGACGGAGTCCGGTACAAGGGCATGTTCGTGAGA
GTCGGGACGGGTGGCGGCAAGGGGACGGGGGGCCGCAACGCCTGGCTGAC
CATCAAGTGCACCGAGGGATAA