prot_L-elsbetiae_contig5347.13526.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5347.13526.1
Unique Name	prot_L-elsbetiae_contig5347.13526.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	179

Homology

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BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 4.190e-25
Identity = 47/72 (65.28%), Postives = 55/72 (76.39%), Query Frame = 0

Query:    4 TDREALEALYHATDGPNWEKSTGWDTDVDLSNWYGVTINDQGRVVKLCLTANNLKGHIPPQLGDLSSLETLD 75
            TDR AL AL++AT G NW+K+T W+TD  L  WYGV +ND GRVVKL L  NNLKGHIP QLGDL +L TL+
Sbjct:   11 TDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTLN 82

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BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 7.650e-24
Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 0

Query:    1 MAQTDREALEALYHATDGPNWEKSTGWDTDVDLSNWYGVTINDQGRVVKLCLTANNLKGHIPPQLGDLSSLE 72
            MAQTDR+AL ALY AT G NW +S  WDTD DL  W+GV +NDQGRVVKL L  NNL+G IP  LG L++L+
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQ 72

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BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.810e-23
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 0

Query:    1 MAQTDREALEALYHATDGPNWEKSTGWDTDVDLSNWYGVTINDQGRVVKLCLTANNLKGHIPPQLGDLSSLETL 74
            MA TDR+ L ALY+ATDGPNW+  T WDT+ DLS+W+GV  +DQGRVVKL L+AN L+G IPPQLG+L  L+ +
Sbjct:    1 MAPTDRDVLVALYNATDGPNWKNKTNWDTNADLSDWHGVKADDQGRVVKLSLSANKLRGSIPPQLGNLIELKEM 74

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BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 2.440e-23
Identity = 45/72 (62.50%), Postives = 59/72 (81.94%), Query Frame = 0

Query:    1 MAQTDREALEALYHATDGPNWEKSTGWDTDVDLSNWYGVTINDQGRVVKLCLTANNLKGHIPPQLGDLSSLE 72
            MA TDR+ L ALY+AT+G NW+ S  W TD DLS W+GVT+N QGRVV+L L+ NNL+GHIPP+LG+L++L+
Sbjct:    1 MASTDRDVLVALYNATEGANWQNSINWGTDADLSQWFGVTVNHQGRVVRLDLSFNNLRGHIPPELGNLAALQ 72

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BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 8.890e-21
Identity = 44/75 (58.67%), Postives = 58/75 (77.33%), Query Frame = 0

Query:    1 MAQTDREALEALYHATDGPNWEKSTGWDTDVDLSNWYGVTINDQGRVVKLCLTANNLKGHIPPQLGDLSSLETLD 75
            MA TDR+AL AL+ +T G +W+K   WDT  +++ W GV +ND+GRVVKL L +NNL+G IPPQLG+LS LE+LD
Sbjct:    1 MALTDRDALVALFRSTGGASWDKKDNWDTAAEIATWSGVQVNDEGRVVKLRLKSNNLRGPIPPQLGNLSFLESLD 75

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BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot
Match: A0A6H5JFA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA4_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.200e-20
Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 0

Query:    1 MAQTDREALEALYHATDGPNWEKSTGWDTDVDLSNWYGVTINDQGRVVKLCLTANNLKGHIPPQLGDLSSLE 72
            MAQTDRE+L A Y+ATDG  W ++T W +   LS+WYGV  NDQGRVVKL L++NNL+G IP +LG+LS+L+
Sbjct:   35 MAQTDRESLTAFYNATDGAKWIRNTNWGSGAPLSDWYGVEANDQGRVVKLYLSSNNLRGPIPLELGNLSALQ 106

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BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot
Match: A0A6H5KVC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC7_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.020e-19
Identity = 43/74 (58.11%), Postives = 52/74 (70.27%), Query Frame = 0

Query:    1 MAQTDREALEALYHATDGPNWEKSTGWDTDVDLSNWYGVTINDQGRVVKLCLTANNLKGHIPPQLGDLSSLETL 74
            MAQ DREAL ALY+AT G  WE    W+T   LS WYGV ++ QGRVV L L  NNL+G IPP+LG L++L+ L
Sbjct:   96 MAQPDREALVALYNATGGAKWENKRNWNTRAALSQWYGVEVDSQGRVVTLSLAGNNLQGTIPPELGQLTALQFL 169

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BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.880e-19
Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 0

Query:    1 MAQTDREALEALYHATDGPNWEKSTGWDTDVDLSNWYGVTINDQGRVVKLCLTANNLKGHIPPQLGDLSSLETL 74
            MA TD +AL ALYHATDG NW+++  W TD DLS WYGV +NDQGRV  L L +NNL+G IP +L  L+ LE L
Sbjct:    1 MAATDYDALVALYHATDGANWKQNRNWITDTDLSQWYGVELNDQGRVACLNLYSNNLRGLIPKELEALTMLEQL 74

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BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot
Match: A0A6H5K8T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T5_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 5.090e-19
Identity = 42/75 (56.00%), Postives = 50/75 (66.67%), Query Frame = 0

Query:    1 MAQTDREALEALYHATDGPNWEKSTGWDTDVDLSNWYGVTINDQGRVVKLCLTANNLKGHIPPQLGDLSSLETLD 75
            +  TDR+AL ALY ATDG NW+    W+TD+ L  W GV  NDQGRVV L L  N L GHIP  LG LS+L+ L+
Sbjct:  108 IMSTDRDALVALYDATDGANWKSKQNWNTDLPLGRWRGVEANDQGRVVGLDLPDNKLHGHIPSDLGHLSALQKLN 182

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BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 5.530e-19
Identity = 44/73 (60.27%), Postives = 52/73 (71.23%), Query Frame = 0

Query:    1 MAQTDREALEALYHATDGPNWEKSTGWDTDVDLSNWYGVTINDQGRVVKLCLTANNLKGHIPPQLGDLSSLET 73
            MAQTDR+AL ALY+AT G  W+ +  W T   LS W+GV +N QGRVVKL L  NNL+G IP +LG LS LET
Sbjct:   71 MAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRGPIPKELGALSRLET 143

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5347.13526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K3D6_9PHAE	4.190e-25	65.28	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JK91_9PHAE	7.650e-24	63.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LKS5_ECTSI	1.810e-23	63.51	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]
D7FJV1_ECTSI	2.440e-23	62.50	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]
D8LCS7_ECTSI	8.890e-21	58.67	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]
A0A6H5JFA4_9PHAE	1.200e-20	61.11	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KVC7_9PHAE	1.020e-19	58.11	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LLG1_ECTSI	1.880e-19	60.81	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]
A0A6H5K8T5_9PHAE	5.090e-19	56.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LFK2_ECTSI	5.530e-19	60.27	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 68..92 e-value: 0.44 score: 19.6 coord: 116..140 e-value: 45.0 score: 7.9
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 48..105 e-value: 2.5E-6 score: 27.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 2..179 e-value: 2.8E-51 score: 176.4
None	No IPR available	PANTHER	PTHR46662:SF10		coord: 3..179
None	No IPR available	PANTHER	PTHR46662	FAMILY NOT NAMED	coord: 3..179
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 4..179

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5347	contig	L-elsbetiae_contig5347:9137..12167 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5347.13526.1	mRNA_L-elsbetiae_contig5347.13526.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5347 7371..12167 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5347.13526.1 ID=prot_L-elsbetiae_contig5347.13526.1|Name=mRNA_L-elsbetiae_contig5347.13526.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=179bp
MAQTDREALEALYHATDGPNWEKSTGWDTDVDLSNWYGVTINDQGRVVKL
CLTANNLKGHIPPQLGDLSSLETLDLSWNKLDGSIPPELGDLRELRTLRL
LTNQLTGHIPKELGALSKLDMLNLWNNKLTGPIPPELGELGALQELVLWG
NELSGPIPNKLGALSELRILCLYDNELTG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf