prot_L-elsbetiae_contig5321.13485.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5321.13485.1
Unique Nameprot_L-elsbetiae_contig5321.13485.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length206
Homology
BLAST of mRNA_L-elsbetiae_contig5321.13485.1 vs. uniprot
Match: D7FNN3_ECTSI (HIT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNN3_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 6.050e-95
Identity = 156/215 (72.56%), Postives = 171/215 (79.53%), Query Frame = 0
Query:    1 MGRIEAETCSVCKENPSKYRCPGCAAPYCSLACNKAHKAGSGTEGGGNYSPPCTGKRAGAPLAHNSSSSNG--------QHSTA--KRPRGGDGVDNSSTGNGVVQEDGATTTACVRKGRDQWRGGREDREEEEWQMSADQMERISGCAWLKAALRDPKLQGLLKEIDQADDREKSLAFHRTSTQFGDFMDKMLLEIEEYRRGGADEPELVAADP 205
            MG+IEAETCSVCKENPSKYRCP C APYCSL CNKAHKAGSG+      +PPCTGKRAGAPL+  + S NG        +HS A  KRPR     +  +  NG V  +G+   ACVRKGRDQWRGGRED+EEEEWQMSADQMERISGCAWLKAA+RDP LQ LL EIDQADDREK+LAFHRTSTQFG+FMDKMLLEIEEYR+GG  EPELVAADP
Sbjct:    1 MGKIEAETCSVCKENPSKYRCPRCGAPYCSLVCNKAHKAGSGS------APPCTGKRAGAPLS--TPSPNGXXXXXXXXRHSPAGAKRPR----KEEVANENGGVAVEGSNK-ACVRKGRDQWRGGREDKEEEEWQMSADQMERISGCAWLKAAVRDPILQKLLTEIDQADDREKALAFHRTSTQFGEFMDKMLLEIEEYRKGGTGEPELVAADP 202          
BLAST of mRNA_L-elsbetiae_contig5321.13485.1 vs. uniprot
Match: A0A835YLN6_9STRA (HIT-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 5.400e-29
Identity = 82/212 (38.68%), Postives = 105/212 (49.53%), Query Frame = 0
Query:    2 GRIEAETCSVCKENPSKYRCPGCAAPYCSLACNKAHKAGSGTEGGGNYSPPCTGKRA------GAPLAHNSSSSNGQHSTAKRPRGGDGVDNSSTGNGVVQEDGATTTACVRKGRDQWRGGREDREEEEWQMSADQMERISGCAWLKAALRDPKLQGLLKEIDQADDREKSLAFHRTSTQFGDFMDKMLLEIEEYRRGGADEPELV--AADP 205
            G+  A  C +C + PSKYRC GC A YCS+AC K HKAGS  E G    PPCTGKRA      G P A N++ +       ++                     A     V+K   Q        EE  WQ++     ++SG  WL+AALRDPKLQ L+ +ID A +RE  L FHRT+ +F   MD++LLE+    R      E V  AA P
Sbjct:   12 GKPAAAICHICNQAPSKYRCAGCDARYCSVACFKTHKAGSTGENGTPVRPPCTGKRARAGDDAGRPAADNAAPA----VRLQQXXXXXXXXXXXXXXXXXXXRSAVPVESVKKEAAQ-------EEEAGWQLTDAHRAQLSGSEWLRAALRDPKLQTLILQIDGARNREAELRFHRTNPEFSALMDRILLEMGLLNRSADGNLEFVPLAAQP 212          
BLAST of mRNA_L-elsbetiae_contig5321.13485.1 vs. uniprot
Match: A0A5J9STR4_9POAL (HIT-type domain-containing protein n=2 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9STR4_9POAL)

HSP 1 Score: 63.2 bits (152), Expect = 5.400e-9
Identity = 53/181 (29.28%), Postives = 79/181 (43.65%), Query Frame = 0
Query:    8 TCSVCKENPSKYRCPGCAAPYCSLACNKAHKAGSGTEGGGNYSPPCTGKRAGAPLAHNSSSSNGQHSTAKRPRGGDGVDN----SSTGNGVVQEDGATTTACVRKGRDQWRGGREDREEEEWQMSADQMERISGCAWLKAALRDPKLQGLLKEIDQADDREKSLAFHRTSTQFGDFMDKML 184
            TCSVCKE PSKY+CP C  PYCS+ C K HK              C        +  +S      HS+  +  G D ++N    SS    +V    +    C  K  +         E+  W +   ++  I+    ++ A+RDP+LQ ++ +ID + + EK L        F  F DK+L
Sbjct:    5 TCSVCKEAPSKYKCPSCRTPYCSVICFKNHK------------DTCQKTLPQEEIGKSSHPEEVTHSSGLQEGGADLLNNKDQQSSLPPDMVCPVKSPHVLCPTKALEV--------EDPSWVVDNKRLRSIAELNEIRDAVRDPELQKMILKIDGSSEPEKELEKLMEGQAFRQFTDKIL 165          
BLAST of mRNA_L-elsbetiae_contig5321.13485.1 vs. uniprot
Match: A0A5J5EVT4_9PEZI (HIT-type domain-containing protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5EVT4_9PEZI)

HSP 1 Score: 60.5 bits (145), Expect = 1.230e-7
Identity = 23/31 (74.19%), Postives = 27/31 (87.10%), Query Frame = 0
Query:    8 TCSVCKENPSKYRCPGCAAPYCSLACNKAHK 38
            TC++C ENPSKY+CP CA PYCSLAC K+HK
Sbjct:   48 TCAICHENPSKYKCPTCACPYCSLACYKSHK 78          
BLAST of mRNA_L-elsbetiae_contig5321.13485.1 vs. uniprot
Match: A0A368RCM1_SETIT (HIT-type domain-containing protein n=8 Tax=Setaria TaxID=4554 RepID=A0A368RCM1_SETIT)

HSP 1 Score: 59.3 bits (142), Expect = 2.530e-7
Identity = 54/189 (28.57%), Postives = 76/189 (40.21%), Query Frame = 0
Query:    8 TCSVCKENPSKYRCPGCAAPYCSLACNKAHKAGSGTEGGGNYSPPCTGKRAGAPLAHNSSSSNGQHSTAKRPRG--GDGVDNSSTGNGVVQEDGAT--TTACVRKGRDQWRGGREDREEEEWQMSADQMERISGCAWLKAALRDPKLQGLLKEIDQADDREKSLAFHRTSTQFGDFMDKMLLEIEEYRR 192
            +CSVCKE PSKY+CP C  PYCS+ C K HKA    +                 L     S +       R  G  GDG       N   Q    +  TT               + E+  W +  +++  ++    +K ALRDP+LQ ++ +ID + + EK L        F  F DK  +E     R
Sbjct:    5 SCSVCKEAPSKYKCPSCRTPYCSVTCFKKHKAEESCQ---------------KILLQEDVSKSPLQEEVTRSSGLVGDGT---KCPNDKDQHPSLSPNTTCPAXXXXXXXXXXALEVEDPSWLVDNNRLRSLAELKEIKDALRDPELQKMILKIDGSSEPEKELEKVMEGQAFRQFTDKEKIEASGQTR 175          
BLAST of mRNA_L-elsbetiae_contig5321.13485.1 vs. uniprot
Match: A0A2T7DEX6_9POAL (HIT-type domain-containing protein n=3 Tax=Panicum TaxID=4539 RepID=A0A2T7DEX6_9POAL)

HSP 1 Score: 57.4 bits (137), Expect = 7.310e-7
Identity = 51/178 (28.65%), Postives = 78/178 (43.82%), Query Frame = 0
Query:    8 TCSVCKENPSKYRCPGCAAPYCSLACNKAHKAGSGTEGGGNYSPPCTGKRAGAPLAHNSSSSNGQ-HSTAKRPRGGDGVDNSSTGNGVVQEDGATTTACVRKGRDQWRGGREDREEEEWQMSADQMERISGCAWLKAALRDPKLQGLLKEIDQADDREKSLAFHRTSTQFGDFMDKML 184
            +CSVCKE PSKY+CP C  PYCS+ C K HK  S  +           + + +PL    + S+G      K P   D   + S            TT               + E+  W +  +++  ++    ++ ALRDP+LQ ++ +ID + + EK L        F  F DK+L
Sbjct:    5 SCSVCKEAPSKYKCPSCRTPYCSVTCFKKHKEESCQK------TLVQDENSKSPLQEEVTRSSGLVEDGTKCPNDKDQHPSLSP----------NTTCPXXXXXXXXXXXALEVEDPSWLVDNNRLRSLAEVKEIRDALRDPELQKMILKIDGSSEPEKELEKVMEGQAFRQFTDKIL 166          
BLAST of mRNA_L-elsbetiae_contig5321.13485.1 vs. uniprot
Match: UPI0015C3EA39 (HIT zinc finger n=1 Tax=Geosmithia morbida TaxID=1094350 RepID=UPI0015C3EA39)

HSP 1 Score: 57.4 bits (137), Expect = 1.270e-6
Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    6 AETCSVCKENPSKYRCPGCAAPYCSLACNKAHK 38
            + TC VC++NPSKY+CP C  PYCS+ACNK H+
Sbjct:   38 SSTCGVCEKNPSKYKCPRCYLPYCSVACNKIHR 70          
BLAST of mRNA_L-elsbetiae_contig5321.13485.1 vs. uniprot
Match: A0A433PTY6_9FUNG (HIT-type domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PTY6_9FUNG)

HSP 1 Score: 55.8 bits (133), Expect = 1.480e-6
Identity = 22/32 (68.75%), Postives = 24/32 (75.00%), Query Frame = 0
Query:    8 TCSVCKENPSKYRCPGCAAPYCSLACNKAHKA 39
            TC VC +NPSKY+CP C  PYCSL C K HKA
Sbjct:    9 TCGVCLDNPSKYKCPNCILPYCSLPCYKKHKA 40          
BLAST of mRNA_L-elsbetiae_contig5321.13485.1 vs. uniprot
Match: UPI000B8C80F7 (box C/D snoRNA protein 1 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C80F7)

HSP 1 Score: 58.2 bits (139), Expect = 1.700e-6
Identity = 29/53 (54.72%), Postives = 32/53 (60.38%), Query Frame = 0
Query:    5 EAETCSVCKENPSKYRCPGCAAPYCSLACNKAHKAGSGTEGGGNYSPPCTGKR 57
            EA  C  CKENPSKY+CPGC+   CSL C KAHK  +G          CTGKR
Sbjct:   18 EAAVCEECKENPSKYKCPGCSIRSCSLPCVKAHKLRTG----------CTGKR 60          
BLAST of mRNA_L-elsbetiae_contig5321.13485.1 vs. uniprot
Match: A0A8K0JR05_9TREE (Uncharacterized protein n=2 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JR05_9TREE)

HSP 1 Score: 57.8 bits (138), Expect = 1.840e-6
Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    9 CSVCKENPSKYRCPGCAAPYCSLACNKAHKAGSGTEG 45
            C  C  NPSKY+CP CA P CSLAC+KAHKA +G  G
Sbjct:   25 CQQCSSNPSKYKCPRCALPTCSLACSKAHKASTGCSG 61          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5321.13485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNN3_ECTSI6.050e-9572.56HIT-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A835YLN6_9STRA5.400e-2938.68HIT-type domain-containing protein n=1 Tax=Tribone... [more]
A0A5J9STR4_9POAL5.400e-929.28HIT-type domain-containing protein n=2 Tax=Eragros... [more]
A0A5J5EVT4_9PEZI1.230e-774.19HIT-type domain-containing protein n=1 Tax=Sphaero... [more]
A0A368RCM1_SETIT2.530e-728.57HIT-type domain-containing protein n=8 Tax=Setaria... [more]
A0A2T7DEX6_9POAL7.310e-728.65HIT-type domain-containing protein n=3 Tax=Panicum... [more]
UPI0015C3EA391.270e-663.64HIT zinc finger n=1 Tax=Geosmithia morbida TaxID=1... [more]
A0A433PTY6_9FUNG1.480e-668.75HIT-type domain-containing protein n=1 Tax=Endogon... [more]
UPI000B8C80F71.700e-654.72box C/D snoRNA protein 1 n=1 Tax=Carica papaya Tax... [more]
A0A8K0JR05_9TREE1.840e-664.86Uncharacterized protein n=2 Tax=Filobasidium flori... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007529Zinc finger, HIT-typePFAMPF04438zf-HITcoord: 6..35
e-value: 1.7E-10
score: 40.6
IPR007529Zinc finger, HIT-typePROSITEPS51083ZF_HITcoord: 9..53
score: 10.491
NoneNo IPR availableGENE3D3.30.60.190coord: 2..44
e-value: 7.7E-10
score: 40.3
NoneNo IPR availablePANTHERPTHR13483UNCHARACTERIZEDcoord: 4..185
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 6..39
IPR040197Zinc finger HIT domain-containing protein 3PANTHERPTHR13483:SF11ZINC FINGER HIT DOMAIN-CONTAINING PROTEIN 3coord: 4..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5321contigL-elsbetiae_contig5321:6003..6995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5321.13485.1mRNA_L-elsbetiae_contig5321.13485.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5321 5199..7865 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5321.13485.1 ID=prot_L-elsbetiae_contig5321.13485.1|Name=mRNA_L-elsbetiae_contig5321.13485.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp
MGRIEAETCSVCKENPSKYRCPGCAAPYCSLACNKAHKAGSGTEGGGNYS
PPCTGKRAGAPLAHNSSSSNGQHSTAKRPRGGDGVDNSSTGNGVVQEDGA
TTTACVRKGRDQWRGGREDREEEEWQMSADQMERISGCAWLKAALRDPKL
QGLLKEIDQADDREKSLAFHRTSTQFGDFMDKMLLEIEEYRRGGADEPEL
VAADP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007529Znf_HIT
IPR040197ZNHIT3