prot_L-elsbetiae_contig5238.13348.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5238.13348.1
Unique Name	prot_L-elsbetiae_contig5238.13348.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	250

Homology

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BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot
Match: D8LLB2_ECTSI (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB2_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 2.040e-80
Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0

Query:   27 YGFPPVRGGRGAPSMFPRKLYQILCETDPAIISWDDDGTSWHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPCFQRDRPEILGGVRRSYPVTSPKWVSQG 145
            YGFPP RGGRGAPSMFPRKLYQILCETDP II+WDDDG S+HIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHP FQRDRPEILGGVRRSYPVTSPKWV+QG
Sbjct:    3 YGFPPARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSYPVTSPKWVTQG 121

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BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot
Match: A0A6H5JRR2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR2_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 1.680e-73
Identity = 114/126 (90.48%), Postives = 117/126 (92.86%), Query Frame = 0

Query:   20 LSEAEATYGFPPVRGGRGAPSMFPRKLYQILCETDPAIISWDDDGTSWHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPCFQRDRPEILGGVRRSYPVTSPKWVSQG 145
            L +    YGFPP RGGRGAPSMFPRKLYQILCETDP IISWDDDG S+HIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHP FQRDRPEILGGVRRSYPVTSPKWV+QG
Sbjct:    5 LGQDGMDYGFPPARGGRGAPSMFPRKLYQILCETDPEIISWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSYPVTSPKWVTQG 130

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BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.180e-23
Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 0

Query:   31 PVRGGRGAPSMFPRKLYQILCETDPAIISWDDDGTSWHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKK--RGRDEKNPGHYYHPCFQRDRPEILGGVRR 132
            P  G RGAP +FPRKLY+IL      II W D G S+ I   E ++  ++  ++RH K +SFQRQLNLYGF+K  +G D    G Y H CF RD+PE+L  VRR
Sbjct:    4 PRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDV---GSYAHECFIRDQPELLTKVRR 104

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BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.890e-22
Identity = 55/127 (43.31%), Postives = 79/127 (62.20%), Query Frame = 0

Query:   15 VRGEDLSEAEAT--------YGFPPVRGGRGAPSMFPRKLYQILCETDPAIISWDDDGTSWHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPCFQRDRPEILGGVRRS 133
            VR   L+ +EA         Y   P  G RGAP +FPRKL+++L + D A+I WD++G  + I + + +    +  +++H+K TSFQRQLNLYGF+K  + E+  G+Y HP FQRD PE L  VRR+
Sbjct:   25 VRAPPLAPSEARRTMVVTEDYKRYPRTGKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAKGERC-GYYVHPHFQRDHPEWLSKVRRT 150

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BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot
Match: A0A7S2GMP7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GMP7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.750e-19
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 0

Query:   34 GGRGAPSMFPRKLYQILCETDPAIISWDDDGTSWHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPCFQRDRPEILGGVRRSYPVTSPKWVSQGGRRGGAG 152
            G RGAP  FPRKL++IL      II W + G S+ I + E ++  ++  ++RH K +SFQRQLNLYGF+K      + G Y H CF ++R E+LG VRR    +SP      G+  G G
Sbjct:    1 GKRGAPQAFPRKLFEILSNEPIDIICWTESGLSFIITDMETFVTSILMKYFRHQKYSSFQRQLNLYGFRKVNMGP-DAGAYAHDCFLKNRGELLGKVRRMPQASSPSVKMLSGKVNGKG 118

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BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot
Match: A0A835Z401_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z401_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.850e-19
Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 0

Query:   17 GEDLSEAEATYGFPPVRGGRGAPSMFPRKLYQILCETDPAIISWDDDGTSWHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKK--RGRDEKNPGHYYHPCFQRDRPEILGGVRR 132
            G++ +E  A++   P  G RGAP  FPR+LY+IL E DP+I+SW   G  + + N   +    +  ++RHN  TSFQRQ NLYGFKK  RG D    G YYH  F+  R E L  +RR
Sbjct:   41 GQNEAELPASHLKYPKTGKRGAPQAFPRRLYEILQEEDPSIVSWVKGGEGFKVNNMHLFANKTLVNYFRHNNYTSFQRQCNLYGFKKLTRGPDT---GMYYHEHFKAGRYEDLNNIRR 155

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BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 8.140e-19
Identity = 49/104 (47.12%), Postives = 63/104 (60.58%), Query Frame = 0

Query:   31 PVRGGRGAPSMFPRKLYQILCETDPAIISWDDDGTSWHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNP--GHYYHPCFQRDRPEILGGVRR 132
            P  G RGAP +FPRKLY+IL      +I W   G S+ I   E ++  ++  ++RH K +SFQRQLNLYGF+K    +K P  G Y H  F RD+PE L  VRR
Sbjct:   96 PRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRK---IQKGPDTGAYAHEHFLRDQPESLTFVRR 196

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BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.240e-18
Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = 0

Query:   34 GGRGAPSMFPRKLYQILCETDPAIISWDDDGTSWHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKK--RGRDEKNPGHYYHPCFQRDRPEILGGVRRS 133
            G RGAP  F RKL +IL     A ISW+ +G+++ + + E + E ++  +YRH+K +SFQRQLNLY F+K  +G D    G Y HP F+RDRP+ L  VRRS
Sbjct:   35 GKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADA---GGYAHPMFRRDRPDDLYHVRRS 133

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BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot
Match: A0A6V1NV08_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NV08_HETAK)

HSP 1 Score: 94.0 bits (232), Expect = 1.550e-18
Identity = 49/113 (43.36%), Postives = 68/113 (60.18%), Query Frame = 0

Query:   36 RGAPSMFPRKLYQILCETDPAIISWDDDGTSWHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPCFQRDRPEILGGVRRSYPVTSPKWVSQGGRR 148
            RGAP  FPRKLY ++     +IISW D G S+++ +  ++I  V+P  +RHN  +SFQRQLNLYGFK R       G Y H  F R +PE+L  ++R+     P+W +   RR
Sbjct:   11 RGAPQAFPRKLYDLINVEPDSIISWSDLGDSFYLHDQPKFIADVLPRHFRHNHFSSFQRQLNLYGFK-RVASGPEQGAYTHNLFHRSQPELLDSIKRT-----PQWSAAKERR 117

[Close]

BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot
Match: A0A835YGA3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGA3_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.340e-18
Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 0

Query:   17 GEDLSEAEATYGFPPVRGGRGAPSMFPRKLYQILCETDPAIISWDDDGTSWHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPCFQRDRPEILGGVRRS 133
            G++ SE +      P  G RGAP  F  KL+++L    P I+SW   G ++ I + E++    +  +++HN   SFQRQLNLYGF+K  + E + G + H  FQRDRPE+L  VRR+
Sbjct:    4 GDEESEVQNDLKRYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGG-FQHASFQRDRPELLIEVRRT 119

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5238.13348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LLB2_ECTSI	2.040e-80	94.12	HSF_DOMAIN domain-containing protein (Fragment) n=...	[more]
A0A6H5JRR2_9PHAE	1.680e-73	90.48	HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc...	[more]
A0A7S2BSE7_9STRA	3.180e-23	50.00	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A7R9YBQ9_9STRA	3.890e-22	43.31	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S2GMP7_9STRA	1.750e-19	42.86	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A835Z401_9STRA	2.850e-19	44.92	HSF-type DNA-binding-domain-containing protein n=1...	[more]
A0A7S2G7U9_9STRA	8.140e-19	47.12	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A6H5KMN3_9PHAE	1.240e-18	48.04	HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc...	[more]
A0A6V1NV08_HETAK	1.550e-18	43.36	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A835YGA3_9STRA	3.340e-18	41.03	HSF-type DNA-binding-domain-containing protein n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 38..133 e-value: 6.4E-17 score: 72.2
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 42..132 e-value: 8.0E-22 score: 77.7
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 36..134 e-value: 5.8E-25 score: 89.6
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 41..186
None	No IPR available	PANTHER	PTHR10015:SF206	HEAT SHOCK FACTOR PROTEIN	coord: 41..186
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 40..132

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5238	contig	L-elsbetiae_contig5238:1692..5104 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5238.13348.1	mRNA_L-elsbetiae_contig5238.13348.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5238 1458..7629 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5238.13348.1 ID=prot_L-elsbetiae_contig5238.13348.1|Name=mRNA_L-elsbetiae_contig5238.13348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp
MSSQQQQQQLGLPPVRGEDLSEAEATYGFPPVRGGRGAPSMFPRKLYQIL
CETDPAIISWDDDGTSWHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG
FKKRGRDEKNPGHYYHPCFQRDRPEILGGVRRSYPVTSPKWVSQGGRRGG
AGRLPTQSSREVSGSRRGSVRREAGAQPAVALPPAPRVPAAAREARRVRT
DVRRRGGHDDGRGPRGDDDGGRGGGGGGGWLSRRPQEGAPLPGAVVLQL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000232	HSF_DNA-bd
IPR036388	WH-like_DNA-bd_sf
IPR027725	HSF_fam
IPR036390	WH_DNA-bd_sf