mRNA_L-elsbetiae_contig5091.13132.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: A0A6H5JY22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY22_9PHAE) HSP 1 Score: 153 bits (386), Expect = 2.320e-38 Identity = 85/193 (44.04%), Postives = 120/193 (62.18%), Query Frame = 3 Query: 78 MWKPDAVVPENRWRARVIWAGLLVSIAAYTVWQLWKIYDGYNNISTSLEVTDELYEFPHLTVCFSPNQGC---DEDTD-CAASALANSN-VALGEDSYEVASISSLDERCVGFDLASLNLKDKDMAPEDVQLVVSASWIVSQSAATDRGFFNHVIVLTSDGEPTLENISDLYVPFLRIIPSSEAVLTQTVAEL 641 MWKPDAVVPE+RWRAR++W LLV I AYT+W +WKI+D N STSL++T++L+ +P++ VCF QGC D D C ++AL S V +DSY +L CV FDL SL D D+ E+ ++ + WI S A+ + +F+H+ + ++ EPT S L+VP+ RI+P E + T VAEL Sbjct: 1 MWKPDAVVPEHRWRARMVWVSLLVGITAYTIWLIWKIFDDRANPSTSLKITNDLFAYPYVLVCFYHGQGCGFTDTSVDTCVSTALTESTTVYFKDDSYGDLGAYALGN-CVSFDLGSLEFGD-DITTENDEVTIDMWWIQSDMASDETDYFDHIGMYMAEEEPTESTSSFLHVPYSRILPDVEVIYT--VAEL 189
BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: D7FTW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW4_ECTSI) HSP 1 Score: 103 bits (258), Expect = 7.580e-22 Identity = 68/208 (32.69%), Postives = 96/208 (46.15%), Query Frame = 3 Query: 126 VIWAGLLVSIAAYTVWQLWKIYDGYNNISTSLEVTDELYEFPHLTVCFSPNQGC---DEDTD-CAASALANSNVALGEDSYEVASISSLDERCVGFDLASLNLKDKDMAPEDVQLVVSASWIVSQSAATDRGFFNHVIVLTSDGEPTLENISDLYVPFLRIIPSSEAVLTQTVAELTIGKTTKEALDGSVKTTYPPLVLSSTEYVDDN 737 ++W LLV I AYT+WQ+WKI+D N S+SL++T++LY +PH+ VCF +GC DE D C +AL+ S Y + + CVGFDL SL D D+ E+ Q ++ TIGKTTK+ L+G V TT+PPLVLSS+++ +N Sbjct: 1 MVWVSLLVCITAYTIWQIWKIFDDLANPSSSLKITNDLYAYPHVLVCFFHGEGCGFEDESVDVCVTTALSESTTVSFNGEYYDDLGAVTESNCVGFDLGSLEFGD-DITAENDQAIID----------------------------------------------------------TIGKTTKKKLNGDVTTTFPPLVLSSSDFTAEN 149
BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: A0A6H5JSG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG4_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 3.330e-16 Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 721 STSTTTPLDLAGFFGNIGGFWELLIVFWGLFFIATREERAPKLKARDFAKTVQTGKEIL-RRRSLSVDSPPVSASRGEERPQWESAYQGTNPAA 999 S +PLD+ FFGN+GGFWELL+V WGL F ATR++R P+L+AR+F +Q KEI+ RRRSLSVDS S + EE PQ S + G +P A Sbjct: 181 SVEEVSPLDVGSFFGNLGGFWELLLVLWGLLFFATRQDRTPQLRARNF---IQPLKEIVARRRSLSVDSG-ASIVQPEELPQERSFFGGNHPPA 270
BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 1.200e-7 Identity = 40/85 (47.06%), Postives = 49/85 (57.65%), Query Frame = 1 Query: 739 PLDLAGFFGNIGGFWELLIVFWGLFFIATREERAPKLKARDFAKTVQTGKEILR-----RRSLSVD---SPPVSASRGEERPQWE 969 PLDLA FGN+GGFW+LL++ W +FF+A + P LK R+F K+V G LR R D SPPV EERP WE Sbjct: 312 PLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQD-PHLKPRNFKKSVNKGLGGLRVGDSTHRGARDDFNGSPPV-----EERPYWE 390
BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 9.960e-7 Identity = 35/81 (43.21%), Postives = 45/81 (55.56%), Query Frame = 1 Query: 739 PLDLAGFFGNIGGFWELLIVFWGLFFIATREERAPKLKARDFAKTVQTGKEILRRRSLSVDSPPVSASRG----EERPQWE 969 P DLA FGN+GGFW+LL++ W +FF+A + P LK R+F K+V G E LR L S EE+P WE Sbjct: 273 PFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQD-PHLKPRNFKKSVAKGLEGLRIGELVTAGTRKDGSSNPEDEEEKPHWE 352
BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: A0A6H5JN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN97_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 1.310e-6 Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = 1 Query: 739 PLDLAGFFGNIGGFWELLIVFWGLFFIATREERAPKLKARDFAKTVQTGKEILRRRSLSVDSPPVSASRG-------EERPQWE 969 PLDLA FGN+GGFW+LL++ W +FF+A + P LK R+F ++V G LR DS +A G EERP WE Sbjct: 272 PLDLAEMFGNVGGFWDLLMIIWPIFFVAASRQD-PHLKPRNFKESVTKGLSGLR----IGDSKHPAARDGFNGSPSVEERPNWE 350
BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 1.680e-6 Identity = 38/85 (44.71%), Postives = 47/85 (55.29%), Query Frame = 1 Query: 739 PLDLAGFFGNIGGFWELLIVFWGLFFIATREERAPKLKARDFAKTVQTGKEILR--------RRSLSVDSPPVSASRGEERPQWE 969 PLDLA FGN+GGFW+LL++ W +FF+A + P LK R+F K+V G LR R SP V EERP WE Sbjct: 344 PLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQD-PHLKPRNFTKSVTKGLGGLRIGDSKHPGGRDDFNSSPQV-----EERPYWE 422
BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 1.810e-6 Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 739 PLDLAGFFGNIGGFWELLIVFWGLFFI-ATREERAPKLKARDFAKTVQTGKEIL-----RRRSLSVDSPP------------VSASRGEERPQWESAYQGTNPA 996 PL++A FGN+GGFW+LL++ W +FFI A+R++ P LK R+F K+V G E++ R S S++ P + GE P WE+ GT PA Sbjct: 271 PLEIAELFGNVGGFWDLLLMLWPIFFISASRQD--PHLKVRNFKKSVTRGSEVVVDLSRRVNSASIEIPHPLRRQPGSRQSNATGEDGEPPPAWETG--GTLPA 370
BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: D7FU22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU22_ECTSI) HSP 1 Score: 57.0 bits (136), Expect = 3.120e-5 Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 739 PLDLAGFFGNIGGFWELLIVFWGLFFI-ATREERAPKLKARDFAKTVQTGKE----ILRR---------RSLSVDSPPVSASRGEERPQ-WESAYQGTNPA 996 PL++A FGN+GGFW+LL++ W +FFI A+R++ P LK R+F K+V G + + RR R + D + EERP WE+ GT PA Sbjct: 78 PLEIAELFGNVGGFWDLLLLLWPIFFISASRQD--PHLKGRNFKKSVTRGSDRVVDLTRRVNNATPYRVRRKAGDRKSNATDEDEERPPAWETG--GTLPA 174
BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: A0A6H5K6D1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6D1_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 4.400e-5 Identity = 31/81 (38.27%), Postives = 45/81 (55.56%), Query Frame = 1 Query: 739 PLDLAGFFGNIGGFWELLIVFWGLFFIATREERAPKLKARDFAKTVQTGKEILRRRSLSVD----SPPVSASRGEERPQWE 969 P DLA FGN+GGFW+LL++ W +FF+A + P LK R+F K+V G + LR + ++ E +P WE Sbjct: 230 PFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQD-PHLKPRNFKKSVAKGLQGLRVGEVVTPWTRKDGSINPEDEEVKPHWE 309 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5091.13132.1 >prot_L-elsbetiae_contig5091.13132.1 ID=prot_L-elsbetiae_contig5091.13132.1|Name=mRNA_L-elsbetiae_contig5091.13132.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=308bp MWKPDAVVPENRWRARVIWAGLLVSIAAYTVWQLWKIYDGYNNISTSLEVback to top mRNA from alignment at L-elsbetiae_contig5091:1245..8963- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5091.13132.1 ID=mRNA_L-elsbetiae_contig5091.13132.1|Name=mRNA_L-elsbetiae_contig5091.13132.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7719bp|location=Sequence derived from alignment at L-elsbetiae_contig5091:1245..8963- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5091:1245..8963- >mRNA_L-elsbetiae_contig5091.13132.1 ID=mRNA_L-elsbetiae_contig5091.13132.1|Name=mRNA_L-elsbetiae_contig5091.13132.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1848bp|location=Sequence derived from alignment at L-elsbetiae_contig5091:1245..8963- (Laminarionema elsbetiae ELsaHSoW15)back to top |