prot_L-elsbetiae_contig5031.13052.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5031.13052.1
Unique Nameprot_L-elsbetiae_contig5031.13052.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length100
Homology
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BLAST of mRNA_L-elsbetiae_contig5031.13052.1 vs. uniprot
Match: A0A484ECM3_BRELC (SPX domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECM3_BRELC)

HSP 1 Score: 50.8 bits (120), Expect = 3.930e-5
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:   30 EDVDEEEEKFKAALDSEVEKVVLFFLSKQGELAQQLLDAR 69
            E+   E+EKFK ALDSEVE+VVLFFL+KQGE A  L D R
Sbjct:   39 EETRNEQEKFKHALDSEVERVVLFFLTKQGEFATALQDLR 78
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5031.13052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A484ECM3_BRELC3.930e-567.50SPX domain-containing protein n=1 Tax=Bremia lactu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5031contigL-elsbetiae_contig5031:5791..7827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5031.13052.1mRNA_L-elsbetiae_contig5031.13052.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5031 5791..7827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5031.13052.1 ID=prot_L-elsbetiae_contig5031.13052.1|Name=mRNA_L-elsbetiae_contig5031.13052.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=100bp
TSSLSEAGVAGSARSLRRRLTSRYSLSVGEDVDEEEEKFKAALDSEVEKV
VLFFLSKQGELAQQLLDARQAPVTPGHQGGGGGGGVAGAGGSFFIANGGG
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