mRNA_L-elsbetiae_contig4996.12993.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4996.12993.1 vs. uniprot
Match: D7FHG8_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG8_ECTSI) HSP 1 Score: 166 bits (420), Expect = 1.980e-49 Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 1 Query: 1 KSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 249 KSSDMP E+VQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIY+FYGQIGVLTFKC Sbjct: 52 KSSDMPPEIVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYIFYGQIGVLTFKC 134
BLAST of mRNA_L-elsbetiae_contig4996.12993.1 vs. uniprot
Match: A0A836CH10_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH10_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.550e-42 Identity = 67/83 (80.72%), Postives = 78/83 (93.98%), Query Frame = 1 Query: 1 KSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 249 KS+DM EM EA+E++TM+VDKFINVKNYEAAAQLIKNS+DKKFGASWHCAIGEGFGFEITYQ+RNMIY++YGQ+GVL +KC Sbjct: 24 KSADMSPEMSSEAIEVMTMAVDKFINVKNYEAAAQLIKNSLDKKFGASWHCAIGEGFGFEITYQKRNMIYMYYGQLGVLAYKC 106
BLAST of mRNA_L-elsbetiae_contig4996.12993.1 vs. uniprot
Match: A0A812X8N6_SYMMI (Dynein light chain n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X8N6_SYMMI) HSP 1 Score: 127 bits (318), Expect = 4.290e-34 Identity = 57/83 (68.67%), Postives = 69/83 (83.13%), Query Frame = 1 Query: 1 KSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 249 +S DM EM E++EI+TM+VDK KNYEAAAQLIK +MDKKFGA+WHC IGEGFGFEITYQ +NM+YV+YG IG+L +KC Sbjct: 45 QSVDMSMEMSMESMEIITMAVDKHQATKNYEAAAQLIKTTMDKKFGAAWHCVIGEGFGFEITYQAKNMVYVYYGSIGILAYKC 127
BLAST of mRNA_L-elsbetiae_contig4996.12993.1 vs. uniprot
Match: A0A7S2FKD5_9STRA (Dynein light chain n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKD5_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.340e-33 Identity = 51/78 (65.38%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 16 PQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 249 PQE VQEA+E+ TM++DKFI+ K+Y+ AA+ IK+ MDKKFG WHCAIGEGFGF++TYQQ+NM+Y++YGQ+G+L +KC Sbjct: 30 PQECVQEAIEVTTMAMDKFISKKDYDGAAKAIKDQMDKKFGTLWHCAIGEGFGFDVTYQQKNMMYIYYGQVGILIYKC 107
BLAST of mRNA_L-elsbetiae_contig4996.12993.1 vs. uniprot
Match: G4YEJ5_PHYSP (Dynein light chain n=22 Tax=Oomycota TaxID=4762 RepID=G4YEJ5_PHYSP) HSP 1 Score: 122 bits (305), Expect = 2.360e-32 Identity = 54/83 (65.06%), Postives = 69/83 (83.13%), Query Frame = 1 Query: 1 KSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 249 K +DM E+ E +EI+TM+ DK + VKNYEAAAQLIK SMDKKFG+SWHC IGEG+GF+I+YQQR+M+Y++ G IGVL +KC Sbjct: 28 KHNDMTAEVCTETIEIITMACDKHVPVKNYEAAAQLIKQSMDKKFGSSWHCFIGEGYGFDISYQQRHMLYLYVGDIGVLVYKC 110
BLAST of mRNA_L-elsbetiae_contig4996.12993.1 vs. uniprot
Match: A0A067BR93_SAPPC (Dynein light chain n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BR93_SAPPC) HSP 1 Score: 121 bits (303), Expect = 4.730e-32 Identity = 53/83 (63.86%), Postives = 70/83 (84.34%), Query Frame = 1 Query: 1 KSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 249 K +DM E+ E VEI+TM+VDK + +KNYEAAAQLIK SMDKKFG+ WHC IGEG+GF+I+YQQR+M+Y++ G+IG+L +KC Sbjct: 28 KHNDMTAEVCTETVEIITMAVDKHVPLKNYEAAAQLIKQSMDKKFGSFWHCFIGEGYGFDISYQQRHMLYMYVGEIGILVYKC 110
BLAST of mRNA_L-elsbetiae_contig4996.12993.1 vs. uniprot
Match: A0A8K1FE69_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE69_PYTOL) HSP 1 Score: 120 bits (301), Expect = 9.750e-32 Identity = 51/83 (61.45%), Postives = 70/83 (84.34%), Query Frame = 1 Query: 1 KSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 249 K +DM E+ E +EI+TM+ DK + VKNYEAAAQLIK SMDKKFG+SWHC +GEG+GF+++YQQR+M++++ G+IGVL +KC Sbjct: 29 KHNDMTAEVCTETMEIITMACDKHVPVKNYEAAAQLIKQSMDKKFGSSWHCFVGEGYGFDVSYQQRHMLFIYVGEIGVLVYKC 111
BLAST of mRNA_L-elsbetiae_contig4996.12993.1 vs. uniprot
Match: D0NDR6_PHYIT (Dynein light chain n=5 Tax=Phytophthora TaxID=4783 RepID=D0NDR6_PHYIT) HSP 1 Score: 120 bits (300), Expect = 1.340e-31 Identity = 52/83 (62.65%), Postives = 69/83 (83.13%), Query Frame = 1 Query: 1 KSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 249 K +DM E+ E +EI+TM+ DK + +KNYE AAQLIK SMDKKFG+SWHC IGEG+GF+I+YQQR+M+Y++ G+IGVL +KC Sbjct: 28 KHNDMTAEVCTETIEIITMACDKHVPMKNYETAAQLIKQSMDKKFGSSWHCFIGEGYGFDISYQQRHMLYLYVGEIGVLVYKC 110
BLAST of mRNA_L-elsbetiae_contig4996.12993.1 vs. uniprot
Match: A0A0N7L6I6_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6I6_PLAHL) HSP 1 Score: 120 bits (301), Expect = 2.230e-31 Identity = 52/83 (62.65%), Postives = 70/83 (84.34%), Query Frame = 1 Query: 1 KSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 249 K +DM E+ E +EI+TM+ DK + +KNYEAAAQLIK SMDKKFG+SWHC IGEG+GF+++YQQR+M+Y++ G+IGVL +KC Sbjct: 57 KHNDMTAEVCTETLEIITMACDKHVPLKNYEAAAQLIKQSMDKKFGSSWHCFIGEGYGFDVSYQQRHMLYMYVGEIGVLVYKC 139
BLAST of mRNA_L-elsbetiae_contig4996.12993.1 vs. uniprot
Match: A0A2D4CBJ0_PYTIN (Dynein light chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBJ0_PYTIN) HSP 1 Score: 119 bits (297), Expect = 3.910e-31 Identity = 51/83 (61.45%), Postives = 69/83 (83.13%), Query Frame = 1 Query: 1 KSSDMPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGEGFGFEITYQQRNMIYVFYGQIGVLTFKC 249 K +DM E+ E +EI+TM+ DK + +KNYEAAAQLIK SMDKKFGASWHC +GEG+GF+++YQQR+M++++ G IGVL +KC Sbjct: 29 KHNDMTAEVCTETMEIITMACDKHVPLKNYEAAAQLIKQSMDKKFGASWHCFVGEGYGFDVSYQQRHMLFIYVGXIGVLIYKC 111 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4996.12993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4996.12993.1 >prot_L-elsbetiae_contig4996.12993.1 ID=prot_L-elsbetiae_contig4996.12993.1|Name=mRNA_L-elsbetiae_contig4996.12993.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp MPQEMVQEAVEIVTMSVDKFINVKNYEAAAQLIKNSMDKKFGASWHCAIGback to top mRNA from alignment at L-elsbetiae_contig4996:10058..12617- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4996.12993.1 ID=mRNA_L-elsbetiae_contig4996.12993.1|Name=mRNA_L-elsbetiae_contig4996.12993.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2560bp|location=Sequence derived from alignment at L-elsbetiae_contig4996:10058..12617- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4996:10058..12617- >mRNA_L-elsbetiae_contig4996.12993.1 ID=mRNA_L-elsbetiae_contig4996.12993.1|Name=mRNA_L-elsbetiae_contig4996.12993.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=480bp|location=Sequence derived from alignment at L-elsbetiae_contig4996:10058..12617- (Laminarionema elsbetiae ELsaHSoW15)back to top |