prot_L-elsbetiae_contig499.12982.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig499.12982.1
Unique Name	prot_L-elsbetiae_contig499.12982.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	472

Homology

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BLAST of mRNA_L-elsbetiae_contig499.12982.1 vs. uniprot
Match: A0A6H5KP63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP63_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 4.740e-45
Identity = 161/391 (41.18%), Postives = 191/391 (48.85%), Query Frame = 0

Query:    1 MCASFAPPKPPSAFTVGKAGQESAGASRRWVYSGKRQNSAPRRSRSPSPLSRESLHGVSGHAFSKKDFATALSAAASHXXXXXXXXXXXXXXXXPGGYAFTTVGGVPTPLSISPTLTPRGGHSLDGAGPLSAPAPATMPLLSPTGDETSATFRFPSAAAXXXXXXAAGFAPDSPRAAAGGPARA--------KGATRAGGDLPLEPFARARIRAAEEGWARREAERQEREKRWRVRVLSGVTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPPQDFLSSAAGELPAIASSKDEFVAVLKLAGLKKPKPSRVDRAWSALASGENRG---GSNPGXXXXXXXXXXXXGGVLAAKVVVASVLRNPDFGAVLVAVALATFV 380
            MCASFAPPKP +AFTVGKAGQ+ A  +RR  YS     S  RR+RS SPL+RE L+G   +AFS +D  T LS A S                   GY            SIS +L  RGG+S+          PA +P+LSPTGDE  A+  F S  A   XXX            A   A          +G     G +PLEPFARAR+RA EEGWAR  A+R+EREKR  +RVLS VT                                          +  +D  S+A  E+PAI SS+DE  AVLKL G+KK KP +V RAWSAL SGE R    G    XXX         GG LAA+V+VA VLRN    A+L AV  AT V
Sbjct:    1 MCASFAPPKPSAAFTVGKAGQDVAEPARRRTYS-----SNGRRNRSLSPLARELLNG-GRNAFSSEDAVTPLSTAGSGA-----------------GYXXXXXXXXXXXXSISQSLKARGGYSIT--------MPAALPMLSPTGDEGPASTGFSSTGASGGXXXXXXXXXXXXXXNATAAANTIPTFSEITRGVIDRNGAVPLEPFARARVRAVEEGWARWAADRREREKRRWIRVLSVVTFLVLVAVLVCRRIGVGISISGPTATLPPGAKPSRNGGPGEVVSV-RDLFSAAVHEMPAIVSSRDELAAVLKLVGIKKAKPEQVGRAWSALVSGEARYVDVGGXXXXXXEGIWQRYVKGGALAAEVLVAGVLRNAAAVALL-AVTFATVV 358

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig499.12982.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig499.12982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KP63_9PHAE	4.740e-45	41.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 367..382
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 227..250
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..226
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 251..366
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 383..471

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig499	contig	L-elsbetiae_contig499:28707..34644 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig499.12982.1	mRNA_L-elsbetiae_contig499.12982.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig499 28707..34644 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig499.12982.1 ID=prot_L-elsbetiae_contig499.12982.1|Name=mRNA_L-elsbetiae_contig499.12982.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=472bp
MCASFAPPKPPSAFTVGKAGQESAGASRRWVYSGKRQNSAPRRSRSPSPL
SRESLHGVSGHAFSKKDFATALSAAASHRGGGSGGGGGGGGGGGPGGYAF
TTVGGVPTPLSISPTLTPRGGHSLDGAGPLSAPAPATMPLLSPTGDETSA
TFRFPSAAAAAAATAAAGFAPDSPRAAAGGPARAKGATRAGGDLPLEPFA
RARIRAAEEGWARREAERQEREKRWRVRVLSGVTLLVLVAVLACRCIGVG
DGSSSGSSSSSSSSSSSSSSSSSSSTAPPQDFLSSAAGELPAIASSKDEF
VAVLKLAGLKKPKPSRVDRAWSALASGENRGGSNPGGGGGVTSMYYIRGG
VLAAKVVVASVLRNPDFGAVLVAVALATFVLLRRRRSWGGLATGNVGGDG
AVRGGRRATSSSGSGSGSGGTHAAAGVLRPGGRGAGGVGTTNGHIGNGVG
IRSGVRARGSPPLSPRPLVGS*