prot_L-elsbetiae_contig4966.12945.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4966.12945.1
Unique Nameprot_L-elsbetiae_contig4966.12945.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length108
Homology
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BLAST of mRNA_L-elsbetiae_contig4966.12945.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.060e-12
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0 
Query:    1 VFKGVTEEGCREEMSCALRCANDNRRAGVNSLAPVETCLLQ 41
            V+KGV++EGCR EM+CALRCA+DNRR GV SLAPVETCL+Q
Sbjct:  500 VYKGVSQEGCRGEMACALRCASDNRRFGVVSLAPVETCLVQ 540
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4966.12945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCL4_ECTSI1.060e-1278.05ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4966contigL-elsbetiae_contig4966:10253..11857 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4966.12945.1mRNA_L-elsbetiae_contig4966.12945.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4966 10252..11857 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4966.12945.1 ID=prot_L-elsbetiae_contig4966.12945.1|Name=mRNA_L-elsbetiae_contig4966.12945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp
VFKGVTEEGCREEMSCALRCANDNRRAGVNSLAPVETCLLQMGKASLARH
RVRSLRQRRQPGPVPSHSPLPTAAAPPPPPPPLPPSSPPPAAAAAGASPP
PVAAADAP
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