mRNA_L-elsbetiae_contig495.12918.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig495.12918.1
Unique NamemRNA_L-elsbetiae_contig495.12918.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: D7FQY0_ECTSI (Dihydroorotase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY0_ECTSI)

HSP 1 Score: 508 bits (1307), Expect = 6.670e-172
Identity = 250/273 (91.58%), Postives = 261/273 (95.60%), Query Frame = 3
Query: 1305 RGSPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLVGEGRRPQVA 2123
            + +PEEI KAKASGHVYAVKLYPAGATTNSDSGVTDLA VAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIK LV+++P LKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKIS CGCAGIFTGHAA+ELYCEVFEGEGALDR AGFSSHHGADFYGIPRNEG+LTLVKEKWTVP  Y FGQTEVVPLRAGE+V WQ+VGEG+RP+ A
Sbjct:   83 KSTPEEILKAKASGHVYAVKLYPAGATTNSDSGVTDLANVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKPLVQKMPNLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISPCGCAGIFTGHAALELYCEVFEGEGALDRFAGFSSHHGADFYGIPRNEGALTLVKEKWTVPGSYKFGQTEVVPLRAGEDVCWQMVGEGKRPKAA 355          
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A835ZAN4_9STRA (Dihydroorotase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN4_9STRA)

HSP 1 Score: 396 bits (1018), Expect = 1.750e-128
Identity = 195/269 (72.49%), Postives = 219/269 (81.41%), Query Frame = 3
Query: 1317 EEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLVGEGRRPQVA 2123
            EEI +A+ SGHV+AVKLYPAGATTNSDSGVTDLAKV P +EAMAEVGMPLL+HGEVT + VDIFDKEARF+EEV+  LV R P LKVV EHITT EA  FV ++  NVAATITPQHLLYNRN IF+GG+RPHMYCLP+LKRE HRL LV AATSG+ K FLGTD+APHAR AK SACGCAGIF+GHAA+ELY EVF+  GALD    F S  GADFYG+PRN  ++TL +E W VPA Y FG +EVVPLRAGE V WQ+  EGRRP  A
Sbjct:   89 EEIHQARKSGHVHAVKLYPAGATTNSDSGVTDLAKVYPVLEAMAEVGMPLLVHGEVTASHVDIFDKEARFVEEVLGPLVARFPNLKVVAEHITTKEAAEFVLSSGPNVAATITPQHLLYNRNEIFRGGVRPHMYCLPILKREEHRLALVGAATSGSAKIFLGTDSAPHARGAKESACGCAGIFSGHAALELYAEVFDAAGALDSFGAFCSQRGADFYGLPRNAATVTLAREPWRVPASYAFGASEVVPLRAGEHVAWQIADEGRRPPAA 357          
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A1H4AZA8_9GAMM (Dihydroorotase n=3 Tax=Thiothrix TaxID=1030 RepID=A0A1H4AZA8_9GAMM)

HSP 1 Score: 367 bits (941), Expect = 3.120e-117
Identity = 178/261 (68.20%), Postives = 214/261 (81.99%), Query Frame = 3
Query: 1311 SPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQL 2093
            SPE+IR+AK+SG ++AVK YPAGATT+SDSGVTD+ +VA  +E M EV +PLLIHGEVT   +DIFD+EA FIE ++  L+ERLP+L+VV+EHITT++A AFVTAA ANVAATIT  HLLYNRNA+FQGGIRPH YCLPVLKRE+HR  LV AATSGNPKFFLGTD+APH R  K S+CGCAGI++ HAA+ELY EVFE  GALD+L  F+S HG+DFYG+PRN+  +TLVK+ WTVPA    G   ++PLRAGE V W L
Sbjct:   81 SPEDIRQAKSSGFIHAVKYYPAGATTHSDSGVTDIRQVAAVLETMQEVDLPLLIHGEVTDTNIDIFDREAVFIERILVPLLERLPRLRVVLEHITTAQAAAFVTAASANVAATITVHHLLYNRNAMFQGGIRPHAYCLPVLKRESHRQALVAAATSGNPKFFLGTDSAPHLRHDKESSCGCAGIYSAHAALELYAEVFEQAGALDKLEAFASFHGSDFYGLPRNQEQVTLVKQPWTVPAALNAGDHALIPLRAGETVGWHL 341          
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A5C8BIR0_9BURK (Dihydroorotase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A5C8BIR0_9BURK)

HSP 1 Score: 366 bits (940), Expect = 5.040e-117
Identity = 175/264 (66.29%), Postives = 214/264 (81.06%), Query Frame = 3
Query: 1311 SPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLVGE 2102
            +P+++R AKASG V+A KLYPAGATTNSDSGVT L K+ PA+EAMAE+G+PLL+HGEVT A VD+FD+E RFI+E +  +VER P L+VV EHITT++A  FV AAPANV ATIT  HLLYNRN +  GGIRPH YCLP+LKR TH+  L++AATSGNPKFFLGTD+APHA+  K +ACGCAG +T +AAIELY E FE +GALD+L  F+SH+GADFYG+PRN   +TLV+E+WT PA   FG  EVVPLRA E++ W+LV E
Sbjct:   83 TPDDVRGAKASGFVHAAKLYPAGATTNSDSGVTSLDKIFPALEAMAEIGLPLLVHGEVTRAEVDVFDREKRFIDEQLTRVVERFPTLRVVFEHITTADAAEFVKAAPANVGATITAHHLLYNRNHMLVGGIRPHFYCLPILKRGTHQQALLEAATSGNPKFFLGTDSAPHAKHTKEAACGCAGCYTAYAAIELYAEAFEQQGALDKLEAFASHYGADFYGLPRNTDRITLVREEWTAPASLPFGDFEVVPLRANEQLRWRLVNE 346          
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A4T0V417_9NEIS (Dihydroorotase n=2 Tax=Crenobacter TaxID=1654931 RepID=A0A4T0V417_9NEIS)

HSP 1 Score: 363 bits (933), Expect = 5.020e-116
Identity = 181/264 (68.56%), Postives = 211/264 (79.92%), Query Frame = 3
Query: 1305 RGSPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLV 2096
            R S +EIR+AKASG V+ VKLYPAGATTNSD+GVT + K  PA+EAMAEVG+PLL+HGEVT   +DIFD+EA FIE+V + L+ RLP LKVV EHITT +A  +V AAPANV ATIT  HLL NRNA+F GG+RPH +CLPVLKRETHR  LVKAATSG+PKFFLGTD+APHAR AK SACGCAG++T HAAIELY E FE  GALDRL  F+S +G  FYG+P N  ++TLV+E WTV     FG TE+VPLRAGE V W+LV
Sbjct:   80 RTSADEIRRAKASGFVHGVKLYPAGATTNSDAGVTSIDKAMPALEAMAEVGLPLLVHGEVTDPAIDIFDREAVFIEQVFEPLIARLPGLKVVFEHITTRQAAEYVAAAPANVGATITAHHLLMNRNALFVGGVRPHHFCLPVLKRETHREALVKAATSGSPKFFLGTDSAPHARHAKESACGCAGMYTAHAAIELYAEAFEAAGALDRLEAFASLNGPAFYGLPANADTVTLVREDWTVEPVLPFGDTELVPLRAGETVRWKLV 343          
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: UPI001BB44DCC (dihydroorotase n=1 Tax=Ferrigenium kumadai TaxID=1682490 RepID=UPI001BB44DCC)

HSP 1 Score: 363 bits (932), Expect = 7.320e-116
Identity = 176/263 (66.92%), Postives = 213/263 (80.99%), Query Frame = 3
Query: 1311 SPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLVG 2099
            S EEIRKAKASG V+AVKLYPAGATTNSD+GVTDL K   A+E M   GMPLL+HGE T A +DIFD+EA FIE V++ L++ +P L+VV EHITT +A  FV +AP N+AAT+TPQHLLYNRNA+  GGIRPH YCLP+LKRETHR  LVKAATSG+ KFFLGTD+APHA+  K +ACGCAG ++ H+AIELY EVFE  GALD+L GF+S HGAD+YG+PRN+ ++TL KE+W VPA   FG+  +VPLRAGE + W+LVG
Sbjct:   82 SAEEIRKAKASGAVHAVKLYPAGATTNSDAGVTDLRKTYAALEEMQRCGMPLLVHGEATDAAIDIFDREAVFIERVMQPLLKDMPNLRVVFEHITTKDAAQFVMSAPDNIAATLTPQHLLYNRNAMLVGGIRPHFYCLPILKRETHREALVKAATSGSRKFFLGTDSAPHAQHTKENACGCAGCYSAHSAIELYAEVFEAAGALDKLEGFASFHGADYYGLPRNKETITLCKEEWQVPASVEFGEHRLVPLRAGETMKWKLVG 344          
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: K3WFP8_GLOUD (Dihydroorotase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFP8_GLOUD)

HSP 1 Score: 363 bits (931), Expect = 1.350e-115
Identity = 173/260 (66.54%), Postives = 211/260 (81.15%), Query Frame = 3
Query: 1317 EEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLV 2096
            +EI++A ASG V+AVKLYPAGATTNSDSGVT++  V PA++AM+EVGMPLL+HGEVT   +DIFD+EA FIE V+K LV ++P+LK+VMEHITT EA  FVT APAN+AATITPQHLLYNRN IFQGG+RPH YCLPVLKRE HRL L++A  SG+ KFFLGTD+APH    K SACGCAGI++GHAA+ELY E FE  G L+ L GF+  HGADFYG+ RN+G   L +E+W VPA Y F  +E+VPL+AGE + W+L+
Sbjct:   93 DEIKRAHASGKVFAVKLYPAGATTNSDSGVTNIENVYPALQAMSEVGMPLLVHGEVTDPSIDIFDREATFIERVLKPLVAKMPQLKIVMEHITTEEAAKFVTQAPANIAATITPQHLLYNRNVIFQGGLRPHKYCLPVLKREKHRLALLEAVASGSKKFFLGTDSAPHIASKKESACGCAGIYSGHAALELYAEAFESIGKLELLQGFACEHGADFYGLKRNDGETILKQEEWQVPASYPFDNSELVPLKAGETMRWKLL 352          
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A7S2USN6_9STRA (Dihydroorotase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USN6_9STRA)

HSP 1 Score: 364 bits (935), Expect = 1.700e-115
Identity = 178/263 (67.68%), Postives = 210/263 (79.85%), Query Frame = 3
Query: 1305 RGSPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQL 2093
            R S EEIRKAK SG VYAVKLYPAGATTNSDSGVTD+  V PA+EAMA+VGMPLL+HGEVT   VD+FD+E  +IE V+K +VE+ P LKVVMEHITT+EA  +V A   NV ATIT  HLLYNRNAIF+GGI PHM+CLP+LKRE HR  L++AATSGNPKFFLGTD+APHA + KIS CGCAGIFTGHA + LY E F+   A+D+L GFSS HG DFYG+PRN   +TLV+  WTVP  Y+FG+ EVVPL+AG ++ W +
Sbjct:  137 RTSAEEIRKAKESGLVYAVKLYPAGATTNSDSGVTDIQNVYPALEAMADVGMPLLVHGEVTDQNVDVFDREPAYIERVLKGVVEKFPALKVVMEHITTAEAAEWVQAQGPNVGATITAHHLLYNRNAIFKGGICPHMFCLPILKRERHRQALLQAATSGNPKFFLGTDSAPHAVQNKISPCGCAGIFTGHAPMSLYAEAFDSVSAMDKLEGFSSFHGPDFYGLPRNSVKITLVRNPWTVPNVYSFGKDEVVPLKAGMDLEWTV 399          
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: G2IV69_PSEUL (Dihydroorotase n=4 Tax=Pseudogulbenkiania TaxID=568394 RepID=G2IV69_PSEUL)

HSP 1 Score: 362 bits (929), Expect = 1.910e-115
Identity = 177/262 (67.56%), Postives = 210/262 (80.15%), Query Frame = 3
Query: 1311 SPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLV 2096
            S EE+RKAKASG V+ VKLYPAGATTNSD+GVT + K  PA+EAMAE+G+PLL+HGEVT   VD+FD+EA FIE V + L+ RLP+LKVV EHITT +A  +V AAPANVAATIT  HLL NRNA+F GGIRPH YCLPVLKRE HR  LVKAATSG+ KFFLGTD+APHAR  K ++CGCAG++T +AAIELY E FE   ALD+L GF+S HG  FYG+PRN  ++TLVKE WTVPA   +G  E+VPLRAGE + W+L+
Sbjct:   81 SAEEVRKAKASGFVHGVKLYPAGATTNSDAGVTSIDKAMPALEAMAEIGLPLLVHGEVTDPAVDVFDREAVFIERVFQPLLARLPQLKVVFEHITTKDAAEYVAAAPANVAATITAHHLLMNRNALFVGGIRPHHYCLPVLKRELHRQALVKAATSGSAKFFLGTDSAPHARHTKENSCGCAGMYTANAAIELYAEAFEAADALDQLEGFASFHGPAFYGLPRNADTITLVKESWTVPASLPYGDQELVPLRAGESIGWKLL 342          
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A1Z4VTX1_9GAMM (Dihydroorotase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z4VTX1_9GAMM)

HSP 1 Score: 359 bits (921), Expect = 3.070e-114
Identity = 171/261 (65.52%), Postives = 206/261 (78.93%), Query Frame = 3
Query: 1311 SPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQL 2093
            SPEEIR A ASGHVYAVKLYPAGATT+SD+GVTD+    P +EAMAE G+PLL+HGEVT   +DIFD+EA FIE  ++ LV RLP+LK+V+EHITT + + FV  +  NVA T+T  HLLYNRNA+  GGIRPH YCLPVLKRE+HR  L+ AATSG+PKFFLGTD+APH + AK SACGCAG++T HAAIE Y E FE   ALD+L GF+SHHGADFYG+PRN  ++TLV+E WTVP  Y     +V+PLRAG E+ W+L
Sbjct:   81 SPEEIRTAAASGHVYAVKLYPAGATTHSDAGVTDIQHTLPTLEAMAEAGLPLLVHGEVTDPDIDIFDREAVFIERHLEPLVRRLPELKLVLEHITTRQGIEFVQGSGPNVAGTLTAHHLLYNRNAMLVGGIRPHYYCLPVLKRESHREALITAATSGSPKFFLGTDSAPHPQHAKESACGCAGLYTAHAAIEFYAEAFEQANALDKLEGFASHHGADFYGLPRNTDTITLVREPWTVPESYPLADAKVIPLRAGGEIAWRL 341          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQY0_ECTSI6.670e-17291.58Dihydroorotase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A835ZAN4_9STRA1.750e-12872.49Dihydroorotase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A1H4AZA8_9GAMM3.120e-11768.20Dihydroorotase n=3 Tax=Thiothrix TaxID=1030 RepID=... [more]
A0A5C8BIR0_9BURK5.040e-11766.29Dihydroorotase n=3 Tax=Proteobacteria TaxID=1224 R... [more]
A0A4T0V417_9NEIS5.020e-11668.56Dihydroorotase n=2 Tax=Crenobacter TaxID=1654931 R... [more]
UPI001BB44DCC7.320e-11666.92dihydroorotase n=1 Tax=Ferrigenium kumadai TaxID=1... [more]
K3WFP8_GLOUD1.350e-11566.54Dihydroorotase n=1 Tax=Globisporangium ultimum (st... [more]
A0A7S2USN6_9STRA1.700e-11567.68Dihydroorotase n=1 Tax=Fibrocapsa japonica TaxID=9... [more]
G2IV69_PSEUL1.910e-11567.56Dihydroorotase n=4 Tax=Pseudogulbenkiania TaxID=56... [more]
A0A1Z4VTX1_9GAMM3.070e-11465.52Dihydroorotase n=4 Tax=Gammaproteobacteria TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig495contigL-elsbetiae_contig495:9998..14768 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score434.9
Seed ortholog evalue2.4e-119
Seed eggNOG ortholog2880.D7FQY0
Preferred nameURA4
KEGG rclassRC00632
KEGG koko:K01465
KEGG ReactionR01993
KEGG Pathwayko00240,ko01100,map00240,map01100
KEGG ModuleM00051
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004151,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019637,GO:0019856,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.dihydroorotase activity
EggNOG OGsCOG0418@1,KOG2902@2759
EC3.5.2.3
COG Functional cat.F
BiGG ReactioniMM904.YLR420W,iND750.YLR420W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionAmidohydrolase 1
Ec32 orthologEc-09_003330.1
Exons7
Model size2364
Cds size693
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816494.3225832-UTR-L-elsbetiae_contig495:9997..102351622816494.3225832-UTR-L-elsbetiae_contig495:9997..10235Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig495 9998..10235 -
1691683600.2891722-UTR-L-elsbetiae_contig495:9997..102351691683600.2891722-UTR-L-elsbetiae_contig495:9997..10235Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig495 9998..10235 -
1622816494.4006917-UTR-L-elsbetiae_contig495:13107..131631622816494.4006917-UTR-L-elsbetiae_contig495:13107..13163Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig495 13108..13163 -
1691683600.358216-UTR-L-elsbetiae_contig495:13107..131631691683600.358216-UTR-L-elsbetiae_contig495:13107..13163Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig495 13108..13163 -
1622816494.4205785-UTR-L-elsbetiae_contig495:13391..147681622816494.4205785-UTR-L-elsbetiae_contig495:13391..14768Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig495 13392..14768 -
1691683600.3718407-UTR-L-elsbetiae_contig495:13391..147681691683600.3718407-UTR-L-elsbetiae_contig495:13391..14768Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig495 13392..14768 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816494.3338726-CDS-L-elsbetiae_contig495:10235..104341622816494.3338726-CDS-L-elsbetiae_contig495:10235..10434Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 10236..10434 -
1691683600.3000276-CDS-L-elsbetiae_contig495:10235..104341691683600.3000276-CDS-L-elsbetiae_contig495:10235..10434Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 10236..10434 -
1622816494.343968-CDS-L-elsbetiae_contig495:10977..110561622816494.343968-CDS-L-elsbetiae_contig495:10977..11056Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 10978..11056 -
1691683600.3104722-CDS-L-elsbetiae_contig495:10977..110561691683600.3104722-CDS-L-elsbetiae_contig495:10977..11056Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 10978..11056 -
1622816494.3565125-CDS-L-elsbetiae_contig495:11206..113601622816494.3565125-CDS-L-elsbetiae_contig495:11206..11360Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 11207..11360 -
1691683600.318493-CDS-L-elsbetiae_contig495:11206..113601691683600.318493-CDS-L-elsbetiae_contig495:11206..11360Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 11207..11360 -
1622816494.3675795-CDS-L-elsbetiae_contig495:11546..116961622816494.3675795-CDS-L-elsbetiae_contig495:11546..11696Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 11547..11696 -
1691683600.3261547-CDS-L-elsbetiae_contig495:11546..116961691683600.3261547-CDS-L-elsbetiae_contig495:11546..11696Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 11547..11696 -
1622816494.3786852-CDS-L-elsbetiae_contig495:11879..119841622816494.3786852-CDS-L-elsbetiae_contig495:11879..11984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 11880..11984 -
1691683600.3342874-CDS-L-elsbetiae_contig495:11879..119841691683600.3342874-CDS-L-elsbetiae_contig495:11879..11984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 11880..11984 -
1622816494.3900993-CDS-L-elsbetiae_contig495:13101..131071622816494.3900993-CDS-L-elsbetiae_contig495:13101..13107Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 13102..13107 -
1691683600.345956-CDS-L-elsbetiae_contig495:13101..131071691683600.345956-CDS-L-elsbetiae_contig495:13101..13107Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig495 13102..13107 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig495.12918.1prot_L-elsbetiae_contig495.12918.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig495 10236..13107 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig495.12918.1

>prot_L-elsbetiae_contig495.12918.1 ID=prot_L-elsbetiae_contig495.12918.1|Name=mRNA_L-elsbetiae_contig495.12918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
MEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVM
EHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVL
KRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAI
ELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACY
TFGQTEVVPLRAGEEVFWQLVGEGRRPQVA*
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mRNA from alignment at L-elsbetiae_contig495:9998..14768-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig495.12918.1 ID=mRNA_L-elsbetiae_contig495.12918.1|Name=mRNA_L-elsbetiae_contig495.12918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4771bp|location=Sequence derived from alignment at L-elsbetiae_contig495:9998..14768- (Laminarionema elsbetiae ELsaHSoW15)
CGGGAGGTCCCGAGAACCAAAGTTATCGGACCAAAATTATCGAACTGTTC TGGATGCCCGCTGATTGGTCGAGAAGGACAGTTCCTGCGCAAGACACCTG CAAATACCAGCTGCAGGGCCCCACACCAATTTGGCGACACTTCCTATACT AAATAGCAGTCAAACTCTGTTAAACGTTTGGCGACACTTTCAATACTCAA TCCAAGTCGAACTTTTTTGGCGTATTTACCAGACAAAATATATTTCTTTG TCTCAGAGACATGAGATGGACCCTGGGCTGTGCACGCGCAGCAGCCCTCA CAACGCATCATGCAGCGTGTGGCGAGCGAAGCAACACGCTCTAGGCTCAG CATGCGGCGGTTCTCGAGAGTTACAGCGAAGCTGTGTGTGCGTGCTGTCA GCTCAAAGGCTCAAATCGCTGGGGGCGCCGCGGAAAGTACAGAGTTTGGA ATGGCAGAGAAGTTGATTTTTTCGTGATTTTGAGATATCAACGACAACTC CGTTGTGTCCACAGCACTGCTGTGGAGCTGTGAGGAGGCCAGATACGGTA GGTAAAGTGTCTATACAACTCGGCAGGGTACTCCCAGGCCTTTGTACGGG ATACCAAGACCGCCCGTGCACCCCAATGTCATTAAACAGTGACCAAAGTT AGGTGTCGCCAAATCGTCGCCATACGCGCTTCCAGTACTATAAGGGTTAA GTCTAGTTTACCTGCTTTCCCACCCAGTAAGGTGAAGGTTGTTATGCACA TATGTATGCGGGCATGGAACCTCGCCGCTGTGCGAATGACGTTCCTACGC ATGCTTATTCGACACGGCATATACTGCCCAAAAGCCAAAATCGTTGTGTG TAAGACACCAGGCCAGCAAGTGCATGTTTTCGCAGGGCATTCCGCAACAA GAATGGATTGAATAAGCGGCGCCACCACTTGAGAAGCTCCGGCGGAGTAT TTTTACGCTAACTACCCTCAGGCCTCGGGTTTTTATTCCTCGGTGGCTTT ATCGTCAGCTAGTATACACCTAGGCGTAGGTGTGGGGCTATTTATCGAGG TCGCCAATCATGACATAGACTATACATAAAACAGCAGTGTGGTATGTACA ACAGTTCTACTTTTTGGAAAGTTGAAAAATGAACCTGAACTTCAACCTGC CAGATTCGGGAGTGGTGGGGGTATATATGTAAGCCTGTATGTATTGTGTT TCGATCGGAACGTCCTGTACTATACTATATATTACTCGGTTTCCGCGAAC TAAAGCAATTTTTATCTTTTGAACCGGAAAAACTGTTGTTAATGCGTTTT TGGCCGTGGCAGTCCGGAGGAAATCCGGAAGGCCAAAGCGAGTGGACATG TGTACGCCGTGAAGCTCTACCCAGCAGGTAGGTACATAGGTGAACGCCTC GTCACAGTTTCGTAGCCACCCAACTCAGGCAATCCAGCAGGCGGCCGCGG CTGGATTCGGCTGGATCTATGGTGAGAATAAAATGAATCTGGTTTGCATT CCTTAACGTAGACGTTCCTTCCCGACTTTGAAAACGCTACATGGCCGCTG TTGCATTCGTGCGAAATCATGACAATCTGTTGTTGATGTGCCTCTCATTC TGCAGGAGCAACCACAAACTCCGACTCGGGCGTGACTGATCTGGCCAAGG TAGCCCCAGCAATGGAGGTGAGTAGTCGAGGGGGGCTTGCCAAGCTTGCC CAGCTCGCCAACGGCATAGGTGGCAGCGCGAACGGGTGGGGCTCTCTCTC ATTTTTAGCGGCACGATATCGTTCGGGGTGAGCCTTTTTGTAATCTCTCA GCCTGCAGGATTTATTTTCGTCGACCACCTTAAGGCTGAGGGCCGCCCTA CACTAATAAGGGTACCGCAGAAAATCGCATACTTCCCCCTGAACACCACG GAGCCTCACTTGAAGTTTGTCTGGGCTTTCCAAACACGCCCGCATTTTCT GACAGTTCTGCCAAAAAAAAAAGTGTTCCGAGATTGCGGCTCTTTTTTAT GAGTTTGCGGAGTGTTTAGGCCGTATAATAAACCACCGCTTGCGCGTTTG AAATGGGAGCTCCGCTCAATTTTGCTGTGTGACCCATCGAATATTGCACA CTCTTTCAAAACAGCCGGGCTACATTCGCGTCGAATCCGTGTCTTTATCG GGGCAAAAACCACGGTGTCGGGCTCCGGCGCGTGGACCCAAATATTTACC CGATTAACCGAAAAAATAGCGGTTAAAAAATCGTTTGTGTGCACCAGAAC ATCGAAAGTGTGGCTTACTGCAACCTGCTGCTGCTACCCAGGACATGCGG CGGCCCCTACACACCATAGTAGTAGGCCCTCCCAGCATATTCCGCTGTTC TTGCCTGTGAGGGGCGAACTATCTGATCTCCTGAACACCAAGCTATCAGT TGGGGGTGTCTCTGACATTCTTTCAAAAGAGTGGTTTTGCACCTTTGGAG AGGAAAATATCCGCCTTCAAGACAGCTACAAATCAGGAGCGGAGCATTTC TCTGTCGAGAACTGCAAACTGCTGCGTTGGAATGAGTCGGCGGGTCGCTA AGGGCCGAACTAGGATGTGGTGCTTGTGGGAGGGCCCGTGCGGTCAATTT GAGCATGCTCGAAAAAATGTGCAATAGAAAATCAATCAATTCGTGCTCGT CACTGAGCCCCTGGATCTAAAGTACAGCTGTGGGCCCCCCTAGCCCCCAG CCTCAAGGGCTGCTGTTGCCGTTGGCTTCGGTTGCAACCGTGAAACGATA TTGCTCTGTGCTTGCTGGTGTGGACGTTTTCCAGGCCATGGCGGAGGTGG GGATGCCGCTACTGATCCACGGGGAAGTGACCACGGCAGGGGTGGACATC TTCGATAAGGAGGCTCGATTCATCGAGGAAGTGATAAAGGTACGTAATTG TAGCGCGCGCCGCCCTTTCGTGATCGTTGTTAACGTCAACAGTGACATCT ACAGTAGATACCACTCACAGTAGACACTGGAAACGTAGGTACATCGAGTG TTTGGTACTGCTCTTGTTGAGGTGAGACATTCCAAACCCCACGTTGCCCT CCGTTTGTCACCCTTCGTTCAGTCACTGGTGGAGAGATTGCCGAAGCTGA AGGTTGTGATGGAGCACATCACCACCTCGGAGGCTGTTGCCTTCGTCACG GCTGCCCCAGCGAACGTGGCAGCTACCATCACGCCGCAGCACCTGCTCTA CAACCGTAACGCGATATTCCAAGTACGTTGCTCTAGTGTTGCCTCTCCTT TTAGCACACGCACGGAGCAATTCGAGTCGTGGAGTTGGATAAAATTCATG CCTGGCCATCGGATATCGTTGTCTATTAAGTACGTGTGTAGAACACCACG ATGTCGTCCTTGTTGCCCAACGGTTCTATTCCTTGTGCGCTGTTGGTGCT TTTGACAGGGAGGCATCCGCCCGCACATGTACTGCCTTCCCGTGCTGAAG CGCGAAACGCACCGGCTGGACCTCGTGAAAGCGGCCACCAGCGGGAACCC TAAGTTCTTCCTTGGGACGGATACTGCACCGCATGCTCGCGAGGCGAAGA TTTCTGCTTGCGGTGAGGCGTACAGATGTGATGCACCCGTGGGGGTGCTC AGTAAGTGCTTTGTGTGGGGTTTGACCGTGTGTGCACCATGTCACCAATT CGCCTTCACTTCACAGTGGAAATGACATCGGTGCTTTCGTTTGGTCATAT CGCGAGGCGCAGGTTGCGCTGGTATCTTCACGGGTCATGCAGCCATCGAG CTGTACTGCGAGGTTTTCGAAGGCGAAGGGGCTCTAGACAGGTTTGAGGC CGCTACTTTAGCATCAAATTCTTGTGCCATCTTCACCTTAAAAAACGCTC CGATCCTGTTAACACCTTCCCATACATATCCCTACGGGTCCAAATGACGC GGACGCCTTGTATGCTCACATTCAAATTCAAATGTCTGAGAGAGGTGCAC CGGTACCTTGATACATCAATTTTTTCAAGAGGGAAATATAGGACCCAACA CAAAATGCGACAAAAGGGCAGGAAATATCGAGGAGGATCAGTCGCACAAT TCTACGCCGAAATACGCAGAGAAGATGTTTTACATGTCCCTTGCTGTCTG TCTCCGAAGCAAGGAGACGGAAAGGCCTTCCAAGTACCGAGTGGAATTTA ATGAAGGGTTGGTGTGTGCACCACTCAACATATTTGCCTCATCGCCCTCC CAGCGTTTGATTTTGGTCCTGAACGTTTTCATTTCCCACCGTTGTCATGG GGTGTGTGTGTGTGTGTGCGGTACTCATCTTTTACCCGATTGCTGGTCAT CTATATATTGCGCGCGTTTCCACCCTCACTGTAGGCTCGCAGGCTTCAGC AGCCACCATGGAGCGGACTTTTACGGCATACCCCGGAATGAGGGATCGCT TACCCTCGTCAAGGAGAAATGGACGGTACCAGCGTGTTACACATTTGGCC AGACGGAAGTGGTGCCGCTGCGAGCTGGGGAGGAGGTCTTTTGGCAGTTA GTTGGAGAGGGCAGGCGTCCACAAGTGGCCTAGGGCTGTTATTGGACACA GTTTTTTTCTGTTAGATAAAACCTGAATCACAGCCTTCAACTTTGCTCGG GGTTGTGCGGCGTTTACAGTGTTGAAAAAGAGAGCTGGCGCGCATGTTCA AGATTAGTCAAGGAGGGCTAGCCTGGAATGCAAAAGAGTCGACAGCCTGG AGCCCGTGTTTCCTCCCCAATCAGTTCAGCGTCGAGAGGAATGACAATCC AGCATCCGCGTTTATACACGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig495:9998..14768-

>mRNA_L-elsbetiae_contig495.12918.1 ID=mRNA_L-elsbetiae_contig495.12918.1|Name=mRNA_L-elsbetiae_contig495.12918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig495:9998..14768- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGATGGAGGCCATGGCGGAGGTGGGGATGCCGCTACTGATCCACGG
GGAAGTGACCACGGCAGGGGTGGACATCTTCGATAAGGAGGCTCGATTCA
TCGAGGAAGTGATAAAGGCCATGGCGGAGGTGGGGATGCCGCTACTGATC
CACGGGGAAGTGACCACGGCAGGGGTGGACATCTTCGATAAGGAGGCTCG
ATTCATCGAGGAAGTGATAAAGTCACTGGTGGAGAGATTGCCGAAGCTGA
AGGTTGTGATGGAGCACATCACCACCTCGGAGGCTGTTGCCTTCGTCACG
GCTGCCCCAGCGAACGTGGCAGCTACCATCACGCCGCAGCACCTGCTCTA
CAACCGTAACGCGATATTCCAATCACTGGTGGAGAGATTGCCGAAGCTGA
AGGTTGTGATGGAGCACATCACCACCTCGGAGGCTGTTGCCTTCGTCACG
GCTGCCCCAGCGAACGTGGCAGCTACCATCACGCCGCAGCACCTGCTCTA
CAACCGTAACGCGATATTCCAAGGAGGCATCCGCCCGCACATGTACTGCC
TTCCCGTGCTGAAGCGCGAAACGCACCGGCTGGACCTCGTGAAAGCGGCC
ACCAGCGGGAACCCTAAGTTCTTCCTTGGGACGGATACTGCACCGCATGC
TCGCGAGGCGAAGATTTCTGCTTGCGGGAGGCATCCGCCCGCACATGTAC
TGCCTTCCCGTGCTGAAGCGCGAAACGCACCGGCTGGACCTCGTGAAAGC
GGCCACCAGCGGGAACCCTAAGTTCTTCCTTGGGACGGATACTGCACCGC
ATGCTCGCGAGGCGAAGATTTCTGCTTGCGGTTGCGCTGGTATCTTCACG
GGTCATGCAGCCATCGAGCTGTACTGCGAGGTTTTCGAAGGCGAAGGGGC
TCTAGACAGGTTGCGCTGGTATCTTCACGGGTCATGCAGCCATCGAGCTG
TACTGCGAGGTTTTCGAAGGCGAAGGGGCTCTAGACAGGCTCGCAGGCTT
CAGCAGCCACCATGGAGCGGACTTTTACGGCATACCCCGGAATGAGGGAT
CGCTTACCCTCGTCAAGGAGAAATGGACGGTACCAGCGTGTTACACATTT
GGCCAGACGGAAGTGGTGCCGCTGCGAGCTGGGGAGGAGGTCTTTTGGCA
GTTAGTTGGAGAGGGCAGGCGTCCACAAGTGGCCTAGGCTCGCAGGCTTC
AGCAGCCACCATGGAGCGGACTTTTACGGCATACCCCGGAATGAGGGATC
GCTTACCCTCGTCAAGGAGAAATGGACGGTACCAGCGTGTTACACATTTG
GCCAGACGGAAGTGGTGCCGCTGCGAGCTGGGGAGGAGGTCTTTTGGCAG
TTAGTTGGAGAGGGCAGGCGTCCACAAGTGGCCTAG
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