prot_L-elsbetiae_contig4926.12884.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4926.12884.1
Unique Nameprot_L-elsbetiae_contig4926.12884.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1001
Homology
BLAST of mRNA_L-elsbetiae_contig4926.12884.1 vs. uniprot
Match: A0A6H5JBA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA9_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 5.660e-128
Identity = 485/1105 (43.89%), Postives = 561/1105 (50.77%), Query Frame = 0
Query:    7 DDDNESIFTTTSSLQKS--IPDDQQRQR-WRSPSWQRGPLLLSGLGAEEGEGRHDHXXXQYSPPFPLYANFAPMMPGLLTCREDNMSKLDISTYSSDDDSSYDDGTDKDARSTAAPHENQPSTGRTVAVSEFSNLAGMSGATAASVLPLKKAAMAGD--TGDRTLQLVPSYSATSGHAGWSKFCLVASDGEQEDHGGDPDSPKQKWEDGQESPDSRTYSLTS---DDDLVVSDGTDPPPLGARDDFGSG---------------EIEFTPQETRAILRVVDRLNCGATALAKIAAFSLEDWMGEVCGPIIRDLEGSEIYRASGLDAQLRFGQHESIPPLKRYISSRLSPASPALLRDALPARVRRRAFLNTAAAMRGELEDPFFKVLGNGGKDSISSTDGGPAQGLGGHNRNNFASVVARRLIEHGQAHYNVSAGPGRFSLPAP--------------------------------------AYSALRDR---------------PSNDDTXXXXXXXXXXXXXXXXXXXXRRKRSQQRRPL--RVDFDAVRAARPDRKSLGRVLGG-----GSXXXXXXXXXXXXXXXXXXXXXXXDDKDYYAGDSDSCSPRSGPPPTALLPKFE-SAGVLDVGDLHPPMADRKIERPSSTERPSATVAIAFTND--GDSSKTRITKEAP---NPAGGRVGSGGTVGRASDRRGDRTAMLEAPASAMLAVEAAXXXXXXXXXXXXXIPNQRAXXXATEKTRTVAVGALPPAPRPAAAVGRRMGLE--LLSPPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--RIFSPDNARNNDAVAARKCVYAGDVGSRRSGPVVVAERNQKHSGNANGDGKTMMDMLETARESKPENTPESDETTTTSS----------VGCSRGGGV---HKCGNHYSNHDNDDDGRGRFHKKGPRMPHKLADRGGQARGGTGGGSEGEELGSKRAFFGGSAGGTLPSRACDNGDDKGRVASDRRGEGXXXXXXXXXXXXXXXXXXXXXVEPVLAA-----VDAPGVERGRLLYEHATRIGGAGRPKMSPVRVAHRRRPRIVYESLW 1000
            DDD   +    S  Q+S   P+++Q ++  R PS Q GPLLL+   A     R  H     S   PL A+   +MPGLLTCR+DNMSKL  +T+S DD  S D        S A     QPSTGRTVAVSEFSNLAG +GA A  V P +K A  GD   G  +L LVPSYS+   +AGWSKFCL +SD E E  GG  DS +Q  ED  E  DSRTYS+TS   DD  V SD TDPP  G +D F  G               +I FT QET+AILRV++RL CGAT LA+ A+F+LEDWM EVC PII+DL GS+ YRASGLDA+ RFG+ ES+PPLKRYIS+ L PAS ALLRDALPARVRRRAF+NTAAAMRGE EDPF  VLGN  + ++    GG  +G+G   RNNFASVVARRL EHG+AH N + G  R  + A                                       A S  RD                P           XXXXXXXXXXXXX R +RS+ RR L  RVD DAVRAAR   K      GG          XXXXXXXXXXXXXXXXXXXX      AGDSDSCSPRS  PP+   P    + G  DV          ++    + +RPS TVA+A   D  G     +  K A    +  GG V   G  G AS RRG       AP SA  AVEAA                +RA   +  + R  A   +P APRPAA + R+ G+   L  PP S                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   A  R FSP +   +   AA     A   G +R                    G T   + E+A ESKPE TPESDE T TSS           G  R G +   H C  H         G     K G     +   RG + R G     E +   SKR FF  S          D G           G      XXXXXXX          V P  A      V A G ERGRLLYE   R+GGA +PKMSP+R   +RRPR+VYESLW
Sbjct:   25 DDDENDLIAAPSPQQRSPSTPEEKQAEKKHRHPSGQCGPLLLNHTAAAAAGHRCRH-----SSLLPL-ADLDQLMPGLLTCRDDNMSKL--ATHSDDD--SGDQALGHGHGSPAGDKNEQPSTGRTVAVSEFSNLAG-TGAAATVVFPPRKPAAGGDGRAGRSSLGLVPSYSSVE-YAGWSKFCLASSDTENE--GGSSDSFEQAKEDESED-DSRTYSITSGEEDDGHVNSDETDPPLRGEQDFFDGGGXXXXXPSSGKSFDSDIHFTVQETQAILRVMERLGCGATTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGREESVPPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNERLAVEGVGGGFGKGIGDDTRNNFASVVARRLAEHGRAHNNAATGTSRTDVAATSALVGGDRGGPGRSRRGPAAATGGRGAAADVAVRGASHAVSIYRDSSDSESDGGVMEVTAPPGASAIADTASAXXXXXXXXXXXXXGRGERSEPRRSLALRVDLDAVRAARKVPKHAIWTGGGEGNTPSGFEEXXXXXXXXXXXXXXXXXXXXXXXXXXAGDSDSCSPRSSSPPSMFRPLSRPTGGAPDVAGF------ARLREHHTRQRPSTTVALALNTDTKGQRHPAKSFKAAAGRGSAVGGSVVGYGWQG-ASPRRG-------APGSARPAVEAAAAVVAAEAKKIAE--PERATTASRGRVRVTATRRIP-APRPAARLARKHGVMAGLSPPPPSQAGSMPTPAAKSETSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAMPREFSPGDVCGSGTKAAEPSAAAA-AGEKRYADACCGTEA----------GFTTAAVAESATESKPEYTPESDEATATSSGEGSREQDLQAGTLRSGDLDRRHACYKH---------GAAVLGKDGVGPGPQRKGRGDERRSG-----EQQATRSKRVFFASSXXXXXXXXXXDKG----------TGSLYHQGXXXXXXXEFDRHSTRPAVVPAPAPAEPMNVPAAGAERGRLLYEQVIRMGGAAQPKMSPLRPLPKRRPRVVYESLW 1062          
BLAST of mRNA_L-elsbetiae_contig4926.12884.1 vs. uniprot
Match: D7FQW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW5_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 4.970e-112
Identity = 241/428 (56.31%), Postives = 281/428 (65.65%), Query Frame = 0
Query:   23 SIPDDQQRQR-WRSPSWQRGPLLLSGLGAEEGEGRHDHXXXQYSPPFPLYANFAPMMPGLLTCREDNMSKLDISTYSSDD--DSSYDDGTDKDARSTAAPHENQPSTGRTVAVSEFSNLAGMSGATAASVLPLKKAAMAGD-TGDRTLQLVPSYSATSGHAGWSKFCLVASDGEQEDHGGDPDSPKQKWEDGQESPDSRTYSLTS---DDDLVVSDGTDPPPLGARDDFGSG-----------------EIEFTPQETRAILRVVDRLNCGATALAKIAAFSLEDWMGEVCGPIIRDLEGSEIYRASGLDAQLRFGQHESIPPLKRYISSRLSPASPALLRDALPARVRRRAFLNTAAAMRGELEDPFFKVLGNGGKDSISSTDGGPAQGLGGHNRNNFASVVARRLIEHGQAHYNVSAGPGRFSLPA 426
            S P+++Q ++  R PS Q GPLLL+             XXX   P     A+  P+MPGLLTCR+DNMSKL  +TYS DD  D +  DG  K A  T      QPSTGRTVAVSEFSNLAG S A A  V P +K A  GD    R+L LVPSYS+   +AGWSKFCL +SD E E  GG   S +Q  ED  E  DSRTYS+TS   D+  V SD TDPP  G +D F  G                 +I FT QET+AILRV++RL CGAT LA+ A+F+LEDWM EVC PII+DL GS+ YRASGLDA+ RFG+ ESIPPLKRYIS+ L PAS ALLRDALPARVRRRAF+NTAAAMRGE EDPF  VLGN G+ +I    GG  +G+G   RNNFASVVARRL EHG+AHYNV+ G  R  + A
Sbjct:   29 SAPEEKQAEKKLRHPSGQCGPLLLNHTXXXXXXXXXXXXXXLLPP-----ADLDPLMPGLLTCRDDNMSKL--ATYSDDDSDDQALGDGRGKPAGDT----NEQPSTGRTVAVSEFSNLAGTSAA-ATVVFPPRKPAADGDGRAGRSLGLVPSYSSVE-YAGWSKFCLASSDTENE--GGSSGSFEQAKEDESED-DSRTYSITSGEEDEGHVNSDETDPPLRGEQDGFDGGXXXXXXXXXXXXXXSDSDIHFTVQETQAILRVMERLGCGATTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGREESIPPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNGRLAIEGVGGGVGKGIGDDTRNNFASVVARRLAEHGRAHYNVADGASRTGVAA 440          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4926.12884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBA9_9PHAE5.660e-12843.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQW5_ECTSI4.970e-11256.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4926contigL-elsbetiae_contig4926:2443..9192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4926.12884.1mRNA_L-elsbetiae_contig4926.12884.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4926 2443..9207 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4926.12884.1 ID=prot_L-elsbetiae_contig4926.12884.1|Name=mRNA_L-elsbetiae_contig4926.12884.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1001bp
MKAAVEDDDNESIFTTTSSLQKSIPDDQQRQRWRSPSWQRGPLLLSGLGA
EEGEGRHDHHHHQYSPPFPLYANFAPMMPGLLTCREDNMSKLDISTYSSD
DDSSYDDGTDKDARSTAAPHENQPSTGRTVAVSEFSNLAGMSGATAASVL
PLKKAAMAGDTGDRTLQLVPSYSATSGHAGWSKFCLVASDGEQEDHGGDP
DSPKQKWEDGQESPDSRTYSLTSDDDLVVSDGTDPPPLGARDDFGSGEIE
FTPQETRAILRVVDRLNCGATALAKIAAFSLEDWMGEVCGPIIRDLEGSE
IYRASGLDAQLRFGQHESIPPLKRYISSRLSPASPALLRDALPARVRRRA
FLNTAAAMRGELEDPFFKVLGNGGKDSISSTDGGPAQGLGGHNRNNFASV
VARRLIEHGQAHYNVSAGPGRFSLPAPAYSALRDRPSNDDTDTDTDNDTD
PRAVAAATAAHRRKRSQQRRPLRVDFDAVRAARPDRKSLGRVLGGGSGGG
VPRGDGSGGGGDGGGYRSSEDDKDYYAGDSDSCSPRSGPPPTALLPKFES
AGVLDVGDLHPPMADRKIERPSSTERPSATVAIAFTNDGDSSKTRITKEA
PNPAGGRVGSGGTVGRASDRRGDRTAMLEAPASAMLAVEAAAAVVAATAL
TTSSIPNQRAAAAATEKTRTVAVGALPPAPRPAAAVGRRMGLELLSPPSS
PEAPAASTASAASAAAAAAAAAAEAAAALPKAKIAAAAAAAAASAAAAVA
RIFSPDNARNNDAVAARKCVYAGDVGSRRSGPVVVAERNQKHSGNANGDG
KTMMDMLETARESKPENTPESDETTTTSSVGCSRGGGVHKCGNHYSNHDN
DDDGRGRFHKKGPRMPHKLADRGGQARGGTGGGSEGEELGSKRAFFGGSA
GGTLPSRACDNGDDKGRVASDRRGEGRRGREAAGPAAAEPAAAESASVEP
VLAAVDAPGVERGRLLYEHATRIGGAGRPKMSPVRVAHRRRPRIVYESLW
*
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