mRNA_L-elsbetiae_contig491.12849.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig491.12849.1 vs. uniprot
Match: D7G7U0_ECTSI (Ephrin_rec_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U0_ECTSI) HSP 1 Score: 413 bits (1062), Expect = 8.770e-144 Identity = 225/270 (83.33%), Postives = 242/270 (89.63%), Query Frame = 1 Query: 1 MKSDG-LLKAFLAPVTLALAWQAWTT-----PRLFVSATLEQCRLDCAGNTTSELVADAALNGGTWSVWDTQRLVGPTEPAPEVNATYPFARAPFPLPFFSFCQLGCSFFFAGSPRTTTCGALCDDFYARDVSVGINDYAEKARLECRDGCNIAVLRCEPGYSCANGVMSVCTPGTYRNTSYDMVNTCLECPRGTYRANEKGRGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECNCMTEESCSPEWQNFQRDSMPYIGR 792 MK DG LL+AF+ P T ALAWQAWTT LFVSATLEQC LDCAGNTT+ELVADAALNGG+WSVWDTQRLVGPTEPA EVNATYP+ARAP PLPF SFCQLGCS+FFAGSPR TTC LCDDFY R+VSVGINDYAEKARLECRDGCNIAVLRC+PGYSCA GVMS C+PGTYRNTSYDM+NTC +CP+GTYRA KG GVDDXXXXXXXXXXXXXXXXXXXXXXXXXXX YA+EEGTAEC+C+TE+SC PEWQNFQRDSMP+IGR Sbjct: 1 MKPDGGLLRAFVVPTTFALAWQAWTTLTASNSSLFVSATLEQCHLDCAGNTTAELVADAALNGGSWSVWDTQRLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSPRNTTCSGLCDDFYVRNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCAAGVMSECSPGTYRNTSYDMINTCTQCPKGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAKEEGTAECSCVTEDSCLPEWQNFQRDSMPHIGR 270
BLAST of mRNA_L-elsbetiae_contig491.12849.1 vs. uniprot
Match: A0A7S1TV74_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV74_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.420e-36 Identity = 72/170 (42.35%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 91 SATLEQCRLDCAGNTTSELVADAALNGGTWSVWDTQRLVGPTEPAPEVNATYPFARAPFPLPFFSFCQLGCSFFFAGSPRTTTCGALCDDFYARDVSVGINDYAEKARLECRDGCNIAVLRCEPGYSCANGVMSVCTPGTYRNTSYDMVNTCLECPRGTYRANEKGRGVD 600 +A L+ C+ DC+ D R VGPT P P +P+ AP P P+ FCQ GCS FF P T C A CD Y DV+V ND AE ARLECRDGC + +LRC+ GY C G M C GTYR+ + V C++CPRG YR++ +GR ++ Sbjct: 16 AADLDHCKADCS---------------------DAARPVGPTRP-PNTRG-HPWFPAPNPNPYLQFCQTGCSLFFESYPVLTDCQAECDRIYRYDVTVAYNDQAEVARLECRDGCEMGLLRCQAGYYCTAGSMLQCPIGTYRDVDFAAVEACVDCPRGRYRSDPRGRYLE 162
BLAST of mRNA_L-elsbetiae_contig491.12849.1 vs. uniprot
Match: A0A7S3HQK9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQK9_9STRA) HSP 1 Score: 130 bits (328), Expect = 4.480e-33 Identity = 100/214 (46.73%), Postives = 126/214 (58.88%), Query Frame = 1 Query: 199 RLVGPTEPAPEVNATYPFARAPFPLPFFSFCQLGCSFFFAGSPRTTTCGALCDDFYARDVSVGINDYAEKARLECRDGCNIAVLRCEPGYSCANGVMSVCTPGTYRNTSYDM-------VNTCLECPRGTYRANEKGRGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECNCMTEESCSP---------EWQNFQRDSMPYIGR 792 RL GPT+ + +P+A A FP FCQLGC F+ P+ TTC LC+ FY ++VG ND AE+A+LEC+DGC IA+ C+ GY C G+M C GTYR D+ +C +CP G YR+ KG+ D XXXXXXXXXXXXXXXXXXXXXXXXXXX G C C+T SC ++ R+S+P+IGR Sbjct: 44 RLTGPTKM--QQTKQHPWAMAAFPTKQKGFCQLGCQLFYTEVPKNTTCKRLCNYFYRYKITVGYNDLAEEAKLECQDGCEIALQVCQAGYYCDEGIMLPCPAGTYREPVTDVSILALEKATSCTKCPYGRYRSTNKGKSADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQRLCKCITPGSCGSIIDDNVVFSNGVDYYRESIPFIGR 255
BLAST of mRNA_L-elsbetiae_contig491.12849.1 vs. uniprot
Match: A0A835ZBR7_9STRA (Ephrin_rec_like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR7_9STRA) HSP 1 Score: 129 bits (324), Expect = 4.630e-33 Identity = 92/171 (53.80%), Postives = 117/171 (68.42%), Query Frame = 1 Query: 286 FCQLGCSFFFAGSPRTTTCGALCDDFYARDVSVGINDYAEKARLECRDGCNIAVLRCEPGYSC--ANGVMSVCTPGTYRNTSYDMVNTCLECPRGTYRANEKGRGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECNCMTEESCSPEWQNFQRDSMPYIGR 792 FC+ GC++F++ SP +C CD+ Y + S ++D+AEKARL+CRDGC I C+PGY C A+G++ C PGTYRN S V C+ CP G YR G G+ DXXXXXXXXXXXXXXXXXXXXXXXXXXX Y EG A C +T +S +PE+QN +S P++GR Sbjct: 35 FCEAGCAYFYSSSPTLQSCDVNCDEMYRQRTSFNVSDWAEKARLDCRDGCRIGFRVCQPGYKCEHAHGMVE-CEPGTYRNASDADVTQCIACPAGHYREAPGGAGLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXLYTLVEGQAACANITYDSGNPEFQNLLNESEPFLGR 204
BLAST of mRNA_L-elsbetiae_contig491.12849.1 vs. uniprot
Match: A0A7S0XEG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEG6_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.480e-29 Identity = 96/186 (51.61%), Postives = 118/186 (63.44%), Query Frame = 1 Query: 199 RLVGPTEPAPEVNATYPFARAPFPLPFFSFCQLGCSFFFAGSPRTTTCGALCDDFYARDVSVGINDYAEKARLECRDGCNIAVLRCEPGYSCANGVMSVCTPGTYRNTSYDM-------VNTCLECPRGTYRANEKGRGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECNCMTEE 735 RL GP +P P+ T+P+ A FP +FC+LGC +FF+ TC C Y + G +D AE A+LEC DGCNIA+ C+ GY C NG M+VC G YR + D+ V+TC+ CP G YRA +KGR +DXXXXXXXXXXXXXXXXXXXXXXXXXXX EEG+ C C+T E Sbjct: 44 RLFGPIKP-PDTR-THPWKVAQFPSTTTAFCKLGCQYFFSYYSNNNTCINQCKYQYRYQATTGYSDSAELAKLECLDGCNIALSICQAGYYCVNGNMTVCPAGKYRESVSDLSLITLEKVHTCINCPYGRYRALDKGRSANDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGSRYCKCITTE 227
BLAST of mRNA_L-elsbetiae_contig491.12849.1 vs. uniprot
Match: A0A7S2CHA6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHA6_9STRA) HSP 1 Score: 124 bits (310), Expect = 3.130e-29 Identity = 96/210 (45.71%), Postives = 122/210 (58.10%), Query Frame = 1 Query: 199 RLVGPTEPAP--------------EVNATYPFARAPFPLPFFSFCQLGCSFFFAGSP------------------RTTTCGALCDDFYARDVSVGINDYAEKARLECRDGCNIAVLRCEPGYSCANGVMSVCTPGTYRNTSYDMVNTCLECPRGTYRANEKGRGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECNCMTE 732 RLVGPT P+ ++ +P+AR+P P P+ FCQ+GC++++ + C A C+ + D++ G +D AE ARLEC DGC IA LRC+PGYSC NG M+ C PGTYR+ Y V C +CP G YR GR + XXXXXXXXXXXXXXXXXXXXXXXXXXX + G A C+C+TE Sbjct: 142 RLVGPTRPSDSDVYLFGLHETIHLDLTRPHPWARSPEPNPYMKFCQIGCTYYYNQEQWGIYPQREVPSDVVENWNTLSACLARCNHTFRYDITTGYSDIAEMARLECWDGCQIANLRCQPGYSCFNGDMNPCKPGTYRHNEYTRVEQCYDCPNGRYRDAVGGREMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHSPGQALCDCITE 351
BLAST of mRNA_L-elsbetiae_contig491.12849.1 vs. uniprot
Match: A0A7S1FSZ0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSZ0_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.500e-27 Identity = 91/206 (44.17%), Postives = 125/206 (60.68%), Query Frame = 1 Query: 265 FPLPFFSFCQLGCSFFFA---GSPRTTTCGALCDDFYARDVSVGINDYAEKARLECRDGCNIAVLRCEPGYSCAN---------------------GVMSVCTPGTYRNTSYDMVNTCLECPRGTYRANEKGRGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECNCMTEESCSPEW-----QNFQRDSMPYIGRQ 795 +P +F CQLGC+ FF+ + ++C +LCDD YA +++V ND E RLECRDGC++A++RC+PGY C G M C PG+YR+ SY V+TC+ CP G +R +G ++ XXXXXXXXXXXXXXXXXXXXXXXXXXX + E G C C+T ++C E +R+++PY+GR+ Sbjct: 224 YPDQYFRACQLGCTLFFSLRENPKQLSSCLSLCDDKYAYNITVSYNDLMELVRLECRDGCHMALMRCQPGYFCLQPSTTLDDDGKHHLSSTSLPNGGSMHECLPGSYRDVSYHAVDTCVPCPPGRFREETRGLSMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFTTEPGRHVCKCITPQACDKEQLPDPADAEKRNTVPYVGRR 429
BLAST of mRNA_L-elsbetiae_contig491.12849.1 vs. uniprot
Match: A0A7S1ZTF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZTF7_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.740e-25 Identity = 88/205 (42.93%), Postives = 118/205 (57.56%), Query Frame = 1 Query: 277 FFSFCQLGCSFFFAGSP---RTTTCGALCDDFYARDVSVGINDYAEKARLECRDGCNIAVLRCEPGYSCAN-------------------------GVMSVCTPGTYRNTSYDMVNTCLECPRGTYRANEKGRGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECNCMTEESCSPEW-----QNFQRDSMPYIGR 792 ++ FC++GC+ FF+ + C CD Y +++VG ND E +RLECRDGC +A+ RC+PGY C+ G MS C G YR+ SYD + C++CP G +R + KG+ +D XXXXXXXXXXXXXXXXXXXXXXXXXXX A C C+T +SC E + +R+++PYIGR Sbjct: 96 YYKFCEVGCTLFFSSISDPMHLSECTHKCDQIYQYNITVGYNDLMEVSRLECRDGCQMALKRCQPGYFCSQVSLLNDDENSTLGPKSHGRDTRYTGGYMSHCPAGKYRDFSYDAIEMCVDCPPGRFREDTKGKSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFCKCITSDSCKKEQLPSPANSEKRETIPYIGR 300
BLAST of mRNA_L-elsbetiae_contig491.12849.1 vs. uniprot
Match: A0A7S2CE24_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CE24_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 6.030e-18 Identity = 42/86 (48.84%), Postives = 47/86 (54.65%), Query Frame = 1 Query: 340 CGALCDDFYARDVSVGINDYAEKARLECRDGCNIAVLRCEPGYSCANGVMSVCTPGTYRNTSYDMVNTCLECPRGTYRANEKGRGV 597 C CD Y + G ND A LEC DGC IA LRC+PGYSC G+M C PGTYR Y V C CP+G YR GR + Sbjct: 205 CMQRCDYTYRFSDTTGYNDVTMLANLECYDGCQIANLRCQPGYSCFYGMMEKCVPGTYRPNDYHKVEQCFNCPKGRYRQEFGGRDI 290
BLAST of mRNA_L-elsbetiae_contig491.12849.1 vs. uniprot
Match: A0A7S2SQ56_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ56_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 6.120e-18 Identity = 58/170 (34.12%), Postives = 82/170 (48.24%), Query Frame = 1 Query: 196 QRLVGPTEPAPEVNATYPFA--RAPFPLPFFSFCQLGCSFFFAGS--PRTTTCGALCDDFYARDVSVGINDYAEKARLECRDGCNIAVLRCEPGYSC----ANGV--------------MSVCTPGTYRNTSYD----------------MVNTCLECPRGTYRANEKGR 591 +R +GPT P+ + Y A + +P + FC+ GC+FF++ P TC C YA + SVG ND A ARLEC DGC++A++RC PGYSC G+ M+ C GT+R Y+ V++C +CP G YR KG+ Sbjct: 86 RRPIGPTRPSEPRDHPYFHAVGKDAWPNTYAKFCEAGCTFFYSEPEYPSNITCKQRCSSTYAYEGSVGENDMAMVARLECYDGCDLALMRCRPGYSCDWPSTTGLGAVDAAAGWTRTANMTACPLGTWRGVLYNETSGSQTDEDLYSPGISVDSCRDCPSGRYRDFPKGK 255 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig491.12849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig491.12849.1 >prot_L-elsbetiae_contig491.12849.1 ID=prot_L-elsbetiae_contig491.12849.1|Name=mRNA_L-elsbetiae_contig491.12849.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp MKSDGLLKAFLAPVTLALAWQAWTTPRLFVSATLEQCRLDCAGNTTSELVback to top mRNA from alignment at L-elsbetiae_contig491:4768..6598- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig491.12849.1 ID=mRNA_L-elsbetiae_contig491.12849.1|Name=mRNA_L-elsbetiae_contig491.12849.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1831bp|location=Sequence derived from alignment at L-elsbetiae_contig491:4768..6598- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig491:4768..6598- >mRNA_L-elsbetiae_contig491.12849.1 ID=mRNA_L-elsbetiae_contig491.12849.1|Name=mRNA_L-elsbetiae_contig491.12849.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig491:4768..6598- (Laminarionema elsbetiae ELsaHSoW15)back to top |