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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 3106 |
| Cds size | 1779 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815351.1888487-UTR-L-elsbetiae_contig11448:1512..1706 | 1622815351.1888487-UTR-L-elsbetiae_contig11448:1512..1706 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11448 1513..1706 + |
| 1691682855.319377-UTR-L-elsbetiae_contig11448:1512..1706 | 1691682855.319377-UTR-L-elsbetiae_contig11448:1512..1706 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11448 1513..1706 + |
| 1622815351.22157-UTR-L-elsbetiae_contig11448:3903..3915 | 1622815351.22157-UTR-L-elsbetiae_contig11448:3903..3915 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11448 3904..3915 + |
| 1691682855.3465483-UTR-L-elsbetiae_contig11448:3903..3915 | 1691682855.3465483-UTR-L-elsbetiae_contig11448:3903..3915 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11448 3904..3915 + |
| 1622815351.2337923-UTR-L-elsbetiae_contig11448:4832..5953 | 1622815351.2337923-UTR-L-elsbetiae_contig11448:4832..5953 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11448 4833..5953 + |
| 1691682855.3563936-UTR-L-elsbetiae_contig11448:4832..5953 | 1691682855.3563936-UTR-L-elsbetiae_contig11448:4832..5953 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11448 4833..5953 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815351.1980977-CDS-L-elsbetiae_contig11448:1706..1709 | 1622815351.1980977-CDS-L-elsbetiae_contig11448:1706..1709 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11448 1707..1709 + |
| 1691682855.328463-CDS-L-elsbetiae_contig11448:1706..1709 | 1691682855.328463-CDS-L-elsbetiae_contig11448:1706..1709 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11448 1707..1709 + |
| 1622815351.208735-CDS-L-elsbetiae_contig11448:2127..3903 | 1622815351.208735-CDS-L-elsbetiae_contig11448:2127..3903 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11448 2128..3903 + |
| 1691682855.3381686-CDS-L-elsbetiae_contig11448:2127..3903 | 1691682855.3381686-CDS-L-elsbetiae_contig11448:2127..3903 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11448 2128..3903 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11448.1266.1 >prot_L-elsbetiae_contig11448.1266.1 ID=prot_L-elsbetiae_contig11448.1266.1|Name=mRNA_L-elsbetiae_contig11448.1266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=593bp
MPTRVCKQEHCRTLSSHGLPGTNRALYCAQHAVDGMIDLKNRPCGHLGCN
KYPSYGRVGTKKREYCSSHAPEGMVRVNGKGCGRMDCIKQPSYGVAGTKK
REFCAQHAEAGMVHVGSRKCGQAGCPKRPSFAVAGSKRAEFCSQHAREGM
MDVCTKRCGEPGCMNGPSFGMAGSTKREFCAQHAREGMTNTRTGRLFARG
RARAAAAAVRGAVVVKPRTAVERVVVPPRTSGGGSADVKGDGSGDCNLGG
NSGYSKEGNRGASNGGSGDNDAFDGNGDGGRGNNGDGNSGGSGDSHGVSN
DGNKLDTSRSVDSNGDNNGGSTEDNGGGSSGGSKDDSNGDTSNNGGINDS
NSGDSDAGGKGDSSGDNNGSGCNGPDSTRQESNNTPPPPELTTGAPTSLY
LSSSSSPLATQPGPCKRARKTPLADVKPAPAPAPAPSTSPSPSPSPSTPT
STSTSPGTATAPAEAPTMATASALATALTQAPAPARAMAPAMAQAPAQAP
AQAIAMAPAMAPAMAAAPATATAPAPVRTDTRGLSAGSSTRRLSNGGVVF
ARAPSPPARDGMSGYWVDRVSDQHGYTDVACRLLMALRRRGR* back to topmRNA from alignment at L-elsbetiae_contig11448:1513..5953+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig11448.1266.1 ID=mRNA_L-elsbetiae_contig11448.1266.1|Name=mRNA_L-elsbetiae_contig11448.1266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4441bp|location=Sequence derived from alignment at L-elsbetiae_contig11448:1513..5953+ (Laminarionema elsbetiae ELsaHSoW15)
CGGTGTGTCACTGCTCTGCTGGCGGTGGACGTGGAAGACAGAGGGCCAGT
CACTGCGGTTTAGTTCCCCGGCTGAACGATTCGAGCAGCATTCTACCTAC
GAGGGGGAAGAACACACAGGCAAACCGTCAGACTTCGCCCAAACGGAGAT
AAGCAACTCAAGCGTCAGCTCTTTGTGAGCGCGGCCTTCATCCTATGGTG
AGTTTCTCTTGAGGGCGGGCGGGCGGTGAAGATATCGTTACGGTCGTTGT
TTTTTGTGCGCTTCGGACGCTGTGGCGCCTGATTGGAACGTGACACCATC
TAAAACGTGTTGTGTTGTCACAAATTCCTCTCGTATTAAAATAGCTCTGA
TGTTCGTTGCTAGCTGTCGGCCCCCCGCGCGAACTTTCCTCTGGTGGACA
CGGGCGCGAGGTACTGTTCTACGGATCGTGTTGCGGCGTATAGGAAATAT
CTTCCGGCATTAATCTATCGTTGCTGATTCCTATTTATCTTGCCCTGCCC
GGCCCCAAACCTCGATGCTGCTTGTGTGTTTGTTTCCGCCTCGTATGTAT
GGTATGTACGTACGATGTTGCGATGTATACGATCGTGATGTGCATTCATA
CGTCCGGACGAGCAGCCTACCAGAGTGTGCAAGCAGGAACACTGCCGGAC
GCTGTCTTCGCACGGGCTGCCAGGGACGAACAGAGCTCTGTACTGCGCCC
AGCATGCCGTGGATGGGATGATCGACCTCAAGAACCGGCCGTGCGGACAC
TTGGGGTGCAACAAGTACCCGTCGTACGGCCGAGTCGGCACGAAAAAGCG
CGAGTATTGTAGCAGCCACGCCCCCGAGGGCATGGTCCGGGTCAACGGCA
AGGGGTGCGGGCGCATGGACTGCATCAAGCAGCCCTCGTACGGCGTGGCC
GGGACCAAAAAACGCGAGTTCTGCGCCCAGCACGCGGAGGCGGGGATGGT
CCACGTCGGCAGCAGGAAGTGCGGCCAGGCGGGCTGCCCCAAGAGGCCCT
CGTTCGCCGTGGCCGGCAGCAAGCGCGCCGAGTTCTGTTCCCAGCACGCC
CGCGAGGGGATGATGGACGTGTGCACCAAGCGCTGCGGAGAGCCGGGCTG
CATGAACGGCCCGTCTTTCGGCATGGCCGGTTCGACCAAGCGGGAGTTCT
GCGCTCAGCACGCCAGGGAAGGGATGACCAACACGAGGACCGGCCGGCTG
TTCGCCCGGGGGAGGGCCAGGGCGGCGGCAGCGGCAGTCCGGGGAGCCGT
GGTGGTTAAGCCGAGGACTGCTGTCGAGAGGGTCGTGGTTCCGCCGAGAA
CCTCCGGCGGCGGGAGTGCTGACGTCAAGGGTGACGGCAGTGGTGATTGC
AATCTTGGCGGCAACAGCGGCTACAGCAAGGAGGGTAACCGCGGTGCCAG
CAATGGCGGCAGCGGTGACAACGACGCTTTTGACGGCAATGGCGACGGCG
GTCGCGGCAACAATGGCGACGGCAATAGCGGCGGCAGTGGTGACAGCCAT
GGTGTCAGTAATGATGGCAACAAGCTTGATACCAGCCGCAGTGTCGACAG
CAACGGTGACAACAATGGTGGCAGCACTGAGGACAACGGCGGTGGCAGCA
GTGGTGGCAGCAAGGACGACAGCAATGGTGACACCAGCAACAATGGTGGC
ATCAATGATAGCAACAGCGGTGACAGCGACGCTGGCGGCAAGGGCGACAG
CAGTGGTGACAACAATGGTAGCGGCTGTAACGGTCCTGATAGCACACGAC
AGGAGAGCAACAACACGCCTCCTCCGCCCGAGCTGACTACCGGAGCTCCA
ACGTCTCTCTATTTATCTTCCTCTTCCTCTCCGCTGGCTACTCAACCGGG
GCCATGCAAGCGGGCTCGTAAAACCCCTCTGGCCGACGTCAAGCCTGCTC
CGGCTCCGGCTCCGGCGCCGTCCACATCTCCGTCTCCGTCTCCGTCTCCG
TCTACGCCTACGTCTACGTCTACGTCTCCAGGTACGGCTACGGCTCCGGC
CGAGGCTCCGACTATGGCTACAGCTTCGGCTTTGGCTACGGCTCTGACTC
AGGCTCCGGCTCCGGCTCGAGCTATGGCTCCGGCTATGGCTCAGGCTCCG
GCTCAGGCTCCGGCTCAGGCTATTGCTATGGCTCCGGCTATGGCTCCGGC
TATGGCTGCGGCCCCGGCTACGGCTACGGCCCCGGCCCCTGTCAGGACCG
ACACGAGGGGGCTCTCTGCGGGTTCTAGCACGCGTCGCCTCTCTAACGGG
GGTGTCGTGTTTGCTCGGGCGCCGTCGCCACCAGCCAGGGATGGGATGAG
CGGGTACTGGGTGGACAGGGTGTCCGATCAGCACGGCTATACTGACGTCG
CGTGCAGGCTCTTGATGGCGTTACGAAGGCGTGGGAGATGAGTTCATTCG
AAGGTGCGCGGAGTGAAGGATTGTTTCTCGGTGTTTCAGACGTACCCCGC
CTCCCCAGTCTGCTAACACTAGAAAATAGAGAGGAAAATAGAAAAATGCC
TGCAAGTTTTTTTCTTTCTTGGCTGTCTCTCACGCAGGCAAGTCTTTCGT
CGGGTCATGGTTGTCAGTGAACTCGTCCGTACAGACCCTACTTTTGTACG
TAAAAAAAAAAAATAGGCTCTTGCCATTTCGCTTAAAATACACAGTTTTT
TTGTTACCGTGTTCCCGCGGCGATCGACTCGTGGGTCCACTTTTGATGAT
GCTGTATACCCGTCCGCGAGTGCATTCCACCGAGCTGCCGGTTGGACTCC
TACCAAAGCCGCCTTTTGAAAGCGAAACGAAGTCTCTGTGTGTTGTGTGT
GTGTGGTGTGTGTGTGTTTGTGTGTTGTCTTACATTAAAAACTGTTCCGA
TCTCTCTATCCAGCACACCTCCATGAGTCCGTACTAATCCAACACTGACG
CGGTCGATTCCCGTTGCCACAGGATAAATTGCCCTAAAAAAGGGTATCGA
TACTGAAGAATGAAAGAAATAAAATGGAGCCGAAGGGTCCACAAAGCATA
AAAACTAAAGATCAGACACAGATAGTCTGGAGCCCTCCGCTCCCCGCTGC
ACGCTATGTGAGGTGAAGACAAAAGTGGACAAGCCAACATCACCAAATGT
ACCATATTTTTGTTTTATTTTTCTTCCCCGGCGTCGAGTTTGCCTTGTTT
TGTGACCACGGCCCCCCAAGGATGTTTTGGACTAGAGAGCTAATGTGAGA
AACAACAGCAACAACAACCAACCGCGGGTCTCTGTTCAATCTTAAAAAAA
GAAAACTCGGATTTATGTTGTAATTTAAATTTACCCCACTTTCTTGCGTC
CTCGCTCTCGTCCCCAGCAGCCGTGCTGAATCAGCAGGAACACAGAACGC
GACGAGATTGAAACGAGAGAGATTGGGGGGGGGGGCGAGAGCCCTGCAGC
ACCGTTGCTGTTGTGAGATGGTGTTGCATTTTTTTTGTTTTTACCTCGAA
AGCATGTGTAGCGGTCGTAACGGGTTTACCGCGAAAGCTACATAAATAGC
GCATGTGATGGTACGGTACAGCTTGGTTGGAGTCCTTTTGGTGCTGCTGT
GTTGGTCGTCTTTTGTATTTATCGATCCTGGAATATATATATATATTAAT
TTTTTTGTCTGCCTATTATTGGATTTTGTCGTCTGCCCCTCTGGCCCCCA
TCCTCCACTTCTACTCTAGGTAGACGACCCAACCGGGGTCACATAGGAGG
GGGGGTTGGACTCCCTCTCGCGGTGCCTGCCTAGGGTATTTTTATCGCGA
GCAGGGTTCAGCATTCCCCACCCTCATCAACAATGAAGTCGAAATAGTAT
TTACTCACGAAATCGCTTCCAATTTTGCCAGGAACGAATGTGAGAAAAAA
CTCGCTTCGCTGGGGCTCGAACCCGGGACCTGGTGCATTAGAAGGTTGCC
AACTACCAGGGCGACCGGCTGTTGGGGGTGATCTGAACGGGGCTTCCTCT
GCGTTCCGGAGTCCTGATCTTCGTGTGTATTCGGGTGTATACCACCGGTT
GGTGATGTTGGTTTGTCCAGTTTTGTTTTTACCTCGCAATGGGAAGGACA
CACACATAGCGTGTAGAGGGGAGCGAGGGGCTCCAAACTATTTGTCTTTG
ATTCTTATCGCTTTGCTGACCCTTCGGGTCCATTTCATTTTCGTACTTCC
ATCTTTTTTTTAGGTGTAAGTTATCCTGTGACCACGGGAGTTGACCGCAT
CAAGGGTTCCATTGTACGGACATAGGGAGGTACTGGGTGGAGAGATCGGA
ACGGTTTTTAATGTGAAGAAACAACAAGGAGACTTCACGAGCTTTTCACG
TGTGGGATCGAGTACGAATAACGATCTTTGAATATTTGAGGTGAGCGCTA
CAGAACGCGCCACCACGTACGAACCTGGGACTCAAGAAATCCAGGCTCGA
AAAGTTCGGATTCTAAGAGCTCGCCCACATTTGAGACGCCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig11448:1513..5953+ >mRNA_L-elsbetiae_contig11448.1266.1 ID=mRNA_L-elsbetiae_contig11448.1266.1|Name=mRNA_L-elsbetiae_contig11448.1266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3558bp|location=Sequence derived from alignment at L-elsbetiae_contig11448:1513..5953+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATGCCTACCAGAGTGTGCAAGCAGGAACACTGCCGGACGCTGTCTTC
GCACGGGCTGCCAGGGACGAACAGAGCTCTGTACTGCGCCCAGCATGCCG
TGGATGGGATGATCGACCTCAAGAACCGGCCGTGCGGACACTTGGGGTGC
AACAAGTACCCGTCGTACGGCCGAGTCGGCACGAAAAAGCGCGAGTATTG
TAGCAGCCACGCCCCCGAGGGCATGGTCCGGGTCAACGGCAAGGGGTGCG
GGCGCATGGACTGCATCAAGCAGCCCTCGTACGGCGTGGCCGGGACCAAA
AAACGCGAGTTCTGCGCCCAGCACGCGGAGGCGGGGATGGTCCACGTCGG
CAGCAGGAAGTGCGGCCAGGCGGGCTGCCCCAAGAGGCCCTCGTTCGCCG
TGGCCGGCAGCAAGCGCGCCGAGTTCTGTTCCCAGCACGCCCGCGAGGGG
ATGATGGACGTGTGCACCAAGCGCTGCGGAGAGCCGGGCTGCATGAACGG
CCCGTCTTTCGGCATGGCCGGTTCGACCAAGCGGGAGTTCTGCGCTCAGC
ACGCCAGGGAAGGGATGACCAACACGAGGACCGGCCGGCTGTTCGCCCGG
GGGAGGGCCAGGGCGGCGGCAGCGGCAGTCCGGGGAGCCGTGGTGGTTAA
GCCGAGGACTGCTGTCGAGAGGGTCGTGGTTCCGCCGAGAACCTCCGGCG
GCGGGAGTGCTGACGTCAAGGGTGACGGCAGTGGTGATTGCAATCTTGGC
GGCAACAGCGGCTACAGCAAGGAGGGTAACCGCGGTGCCAGCAATGGCGG
CAGCGGTGACAACGACGCTTTTGACGGCAATGGCGACGGCGGTCGCGGCA
ACAATGGCGACGGCAATAGCGGCGGCAGTGGTGACAGCCATGGTGTCAGT
AATGATGGCAACAAGCTTGATACCAGCCGCAGTGTCGACAGCAACGGTGA
CAACAATGGTGGCAGCACTGAGGACAACGGCGGTGGCAGCAGTGGTGGCA
GCAAGGACGACAGCAATGGTGACACCAGCAACAATGGTGGCATCAATGAT
AGCAACAGCGGTGACAGCGACGCTGGCGGCAAGGGCGACAGCAGTGGTGA
CAACAATGGTAGCGGCTGTAACGGTCCTGATAGCACACGACAGGAGAGCA
ACAACACGCCTCCTCCGCCCGAGCTGACTACCGGAGCTCCAACGTCTCTC
TATTTATCTTCCTCTTCCTCTCCGCTGGCTACTCAACCGGGGCCATGCAA
GCGGGCTCGTAAAACCCCTCTGGCCGACGTCAAGCCTGCTCCGGCTCCGG
CTCCGGCGCCGTCCACATCTCCGTCTCCGTCTCCGTCTCCGTCTACGCCT
ACGTCTACGTCTACGTCTCCAGGTACGGCTACGGCTCCGGCCGAGGCTCC
GACTATGGCTACAGCTTCGGCTTTGGCTACGGCTCTGACTCAGGCTCCGG
CTCCGGCTCGAGCTATGGCTCCGGCTATGGCTCAGGCTCCGGCTCAGGCT
CCGGCTCAGGCTATTGCTATGGCTCCGGCTATGGCTCCGGCTATGGCTGC
GGCCCCGGCTACGGCTACGGCCCCGGCCCCTGTCAGGACCGACACGAGGG
GGCTCTCTGCGGGTTCTAGCACGCGTCGCCTCTCTAACGGGGGTGTCGTG
TTTGCTCGGGCGCCGTCGCCACCAGCCAGGGATGGGATGAGCGGGTACTG
GGTGGACAGGGTGTCCGATCAGCACGGCTATACTGACGTCGCGTGCAGGC
TCTTGATGGCGTTACGAAGGCGTGGGAGATGACCTACCAGAGTGTGCAAG
CAGGAACACTGCCGGACGCTGTCTTCGCACGGGCTGCCAGGGACGAACAG
AGCTCTGTACTGCGCCCAGCATGCCGTGGATGGGATGATCGACCTCAAGA
ACCGGCCGTGCGGACACTTGGGGTGCAACAAGTACCCGTCGTACGGCCGA
GTCGGCACGAAAAAGCGCGAGTATTGTAGCAGCCACGCCCCCGAGGGCAT
GGTCCGGGTCAACGGCAAGGGGTGCGGGCGCATGGACTGCATCAAGCAGC
CCTCGTACGGCGTGGCCGGGACCAAAAAACGCGAGTTCTGCGCCCAGCAC
GCGGAGGCGGGGATGGTCCACGTCGGCAGCAGGAAGTGCGGCCAGGCGGG
CTGCCCCAAGAGGCCCTCGTTCGCCGTGGCCGGCAGCAAGCGCGCCGAGT
TCTGTTCCCAGCACGCCCGCGAGGGGATGATGGACGTGTGCACCAAGCGC
TGCGGAGAGCCGGGCTGCATGAACGGCCCGTCTTTCGGCATGGCCGGTTC
GACCAAGCGGGAGTTCTGCGCTCAGCACGCCAGGGAAGGGATGACCAACA
CGAGGACCGGCCGGCTGTTCGCCCGGGGGAGGGCCAGGGCGGCGGCAGCG
GCAGTCCGGGGAGCCGTGGTGGTTAAGCCGAGGACTGCTGTCGAGAGGGT
CGTGGTTCCGCCGAGAACCTCCGGCGGCGGGAGTGCTGACGTCAAGGGTG
ACGGCAGTGGTGATTGCAATCTTGGCGGCAACAGCGGCTACAGCAAGGAG
GGTAACCGCGGTGCCAGCAATGGCGGCAGCGGTGACAACGACGCTTTTGA
CGGCAATGGCGACGGCGGTCGCGGCAACAATGGCGACGGCAATAGCGGCG
GCAGTGGTGACAGCCATGGTGTCAGTAATGATGGCAACAAGCTTGATACC
AGCCGCAGTGTCGACAGCAACGGTGACAACAATGGTGGCAGCACTGAGGA
CAACGGCGGTGGCAGCAGTGGTGGCAGCAAGGACGACAGCAATGGTGACA
CCAGCAACAATGGTGGCATCAATGATAGCAACAGCGGTGACAGCGACGCT
GGCGGCAAGGGCGACAGCAGTGGTGACAACAATGGTAGCGGCTGTAACGG
TCCTGATAGCACACGACAGGAGAGCAACAACACGCCTCCTCCGCCCGAGC
TGACTACCGGAGCTCCAACGTCTCTCTATTTATCTTCCTCTTCCTCTCCG
CTGGCTACTCAACCGGGGCCATGCAAGCGGGCTCGTAAAACCCCTCTGGC
CGACGTCAAGCCTGCTCCGGCTCCGGCTCCGGCGCCGTCCACATCTCCGT
CTCCGTCTCCGTCTCCGTCTACGCCTACGTCTACGTCTACGTCTCCAGGT
ACGGCTACGGCTCCGGCCGAGGCTCCGACTATGGCTACAGCTTCGGCTTT
GGCTACGGCTCTGACTCAGGCTCCGGCTCCGGCTCGAGCTATGGCTCCGG
CTATGGCTCAGGCTCCGGCTCAGGCTCCGGCTCAGGCTATTGCTATGGCT
CCGGCTATGGCTCCGGCTATGGCTGCGGCCCCGGCTACGGCTACGGCCCC
GGCCCCTGTCAGGACCGACACGAGGGGGCTCTCTGCGGGTTCTAGCACGC
GTCGCCTCTCTAACGGGGGTGTCGTGTTTGCTCGGGCGCCGTCGCCACCA
GCCAGGGATGGGATGAGCGGGTACTGGGTGGACAGGGTGTCCGATCAGCA
CGGCTATACTGACGTCGCGTGCAGGCTCTTGATGGCGTTACGAAGGCGTG
GGAGATGA back to top
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