mRNA_L-elsbetiae_contig10058.103.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10058.103.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 145 bits (367), Expect = 4.680e-36 Identity = 97/227 (42.73%), Postives = 127/227 (55.95%), Query Frame = 3 Query: 534 NQQVEIMGMLTSAGVVDTG--VALVAAACGRESSAVKFLLQQWGQKASSDGAGYLETTNDTGATPLVCSIEACLPCSPRIARLLVDAGANITTAVRLTDPAGRFFFNGTALAFLDQVRCVRMLPGKDAAESQLHSLEATRRLLLRVEAVHAVSWLWARDVLSVTRTASEGTGGATSTTSTPLISVLPVLRRRAGRPRVLLAALFRHSGKPD*PGPLRALCASSHFGV 1208 NQ ++IM +LT AGV D V L A GRE+S V+FLL+Q +++ Y +++ +G TPL CSIE C +PRI RLLVDAGA+ T+ VR+T+ G +N T LA + +++ GK A E QLH L+A RRLLLRV+AVHAVSWLW D S+ G PL LP+L+RRA V +A L R S G RA + G Sbjct: 2 NQHMDIMAILTGAGVRDAMGYVLLGTAGLGREAS-VQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPR--RPPLSLTLPILKRRAKTCHVFVATLLRSSPISSGRGSRRADLSKEKAGT 225
BLAST of mRNA_L-elsbetiae_contig10058.103.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 137 bits (345), Expect = 3.280e-31 Identity = 93/212 (43.87%), Postives = 128/212 (60.38%), Query Frame = 3 Query: 537 QQVEIMGMLTSAGVVDTGVALVAAACGRESSAVKFLLQQWGQKASSDGAGYLETTNDTGATPLVCSIEACLPCSPRIARLLVDAGANITTAVRLTDPAGRFFFNGTALAFL-----DQVRCVRMLPGKDAAESQLHSLEATRRLLLRVEAVHAVSWLWARDVLSVTRTASEGTGGATSTTSTPLISVLPVLRRRAGRPRVLLAALFRHSGKP 1157 + + IM +LT+AGVVDTG+ALV AA + +KFLL+Q + + D A Y+ T + G TPL+ I+ PR+ RLLV+AGA+ T+ V + + G + T L D+V+ V P A+ QLH LEA RRLLLRVEAVHAVSWLW D+ ++TR A+ GT T+ ++ + +L RR GR +V LAAL R+S KP Sbjct: 231 KNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHY---RPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGP---ASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGR-KVPLAALLRYSSKP 435
BLAST of mRNA_L-elsbetiae_contig10058.103.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 131 bits (329), Expect = 5.370e-29 Identity = 93/210 (44.29%), Postives = 127/210 (60.48%), Query Frame = 3 Query: 540 QVEIMGMLTSAGVVDTGVALVAAACGRESSAVKFLLQQWGQKASSDGAGYLETTNDTGATPLVCSIEACLPCSPRIARLLVDAGANITTAVRLTDPAGRFFFNGTALAFLDQVRCVRMLPGKDAAE---SQLHSLEATRRLLLRVEAVHAVSWLWARDVLSVTRTASEGTGG--ATSTTSTPLISVLPVLRRRAGRPRVLLAALFRHSGK 1154 +++IM +LT AGVVDTG+ALV AA + +KFLL+Q + S+D A Y+ T N G T L+ I+ C PR+ +LLV+AGA+ T+ V + + G F+ T L C +L G+ A + + LE RRLLLR EAVHAVSWLW D ++T ++GTG ATST +TP I +L + RR GR + LLAAL R+S K Sbjct: 232 RLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRC---RPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGL---TMC--LLGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFI-MLMIGRRTRGR-KGLLAALLRYSSK 431
BLAST of mRNA_L-elsbetiae_contig10058.103.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 128 bits (321), Expect = 5.220e-28 Identity = 101/265 (38.11%), Postives = 135/265 (50.94%), Query Frame = 3 Query: 396 QHYRLHTAS----IGCTIWALGDYGSTDRGRGQAQHACVGRFDIAAHGGDNQQVEIMGMLTSAGVVDTGVALVAAACGRESSAVKFLLQQWGQKASSDGAGYLETTNDTGATPLVCSIEACL--PCSPRIARLLVDAGANITTAVRLTDPAGRFFFNGTALAFLDQVRCVRMLPGKDAAESQLHSLEATRRLLLRVEAVHAVSWLWARDVLSVTRTASEGTGG----ATSTTSTPLISVLPVLRRRAGRPRVLLAALFRHSGKPD 1160 QH L TA+ +G + L +G G G + + H +++M LT+AGVVDTG+ALV A VKFLLQQ S A + G TPL+C+I+ L CSP++ RLLVDAGA+ T+ VR T G T L+ + +++ K + L LE RRLLLRVEAVHA SWLW V V A GT ++STT+ L +VLP+LRRRA + A+L R++ K D Sbjct: 183 QHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPH------MDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAG-GTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVKLD 440
BLAST of mRNA_L-elsbetiae_contig10058.103.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 127 bits (320), Expect = 5.340e-28 Identity = 96/227 (42.29%), Postives = 125/227 (55.07%), Query Frame = 3 Query: 528 GDNQQVEIMGMLTSAGVVDTGVAL-VAAACGRESSAVKFLLQQWGQKASSDGAG-YLETTNDTGATPLVCSIEAC----LPCSPRIARLLVDAGANITTAVRLTDPAGRFFFNGTALAFLDQVRCVRMLPGKDAAESQLHSLEATRRLLLRVEAVHAVSWLWARDVLSVTRTASEGTGG-----------ATSTTSTPLISVLPVLRRRAGRPRVLLAALFRHSGKP 1157 G+ ++V M +LT AGVVDTG AL ++A GRE+S VK+LLQ A G G Y+ + G TPL+ SI C PR+ARLLV+AGA+ TT +R T+ G F+ T L + + + G ++ +L LE RRLLL+VEAVHA SWLW +S G GG AT+ + L VLP+LRRRA RP V+ AL RH KP Sbjct: 211 GEGRRVAAMALLTHAGVVDTGQALTISAGLGREAS-VKYLLQN---HAKHYGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWP---------SSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424
BLAST of mRNA_L-elsbetiae_contig10058.103.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 128 bits (321), Expect = 1.420e-27 Identity = 95/219 (43.38%), Postives = 123/219 (56.16%), Query Frame = 3 Query: 519 AHGGDNQQVEIMGMLTSAGVVDTGVAL-VAAACGRESSAVKFLLQQWGQKASSDGAG-YLETTNDTGATPLVCSIEACLPCSPRIARLLVDAGANITTAVRLTDPAGRFFFNGTALAFLD-QVRCVRMLPGKDAAESQLHSLEATRRLLLRVEAVHAVSWLWARDVLSVTRTASEGTGGATSTTSTP----LISVLPVLRRRAGRPRVLLAALFRHSGK 1154 A NQ ++IM +LT AGVVDTG AL +AA G E+S VKFLL+ ++ G YL + G TPLV + C +PRI R+LVDAGA+ T+ V++ + G FN T LAF ++R + GK A + L LEA RLLLRV+AVHAVSWLW + G AT T P L +LP+L+RR R L+A L R+S K Sbjct: 317 AFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEAS-VKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFI--------GRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_L-elsbetiae_contig10058.103.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 125 bits (313), Expect = 5.430e-27 Identity = 86/204 (42.16%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 537 QQVEIMGMLTSAGVVDTGVALVAAACGRESSAVKFLLQQWGQKASSDGAGYLETTNDT-GATPLVCSIEACLPCSPRIARLLVDAGANITTAVRLTDPAGRFFFNGTALAFLDQVRCVRMLPGKDAAESQLHSLEATRRLLLRVEAVHAVSWLWARDVLSVTRTASEGTGGATSTTSTPLISVLP-VLRRRAGRPRVLLAALFR 1142 Q V+IMG+LT GVVDTG ALV AA +VKFLLQ + G Y+ T D G TPLVC+IEAC SPRIAR L+D GA+ + V +T T L F + + GK+A E QL SL+A RLL ++EAVHAVSWLW + + TT+ P + + VLR G+ V+L A++R Sbjct: 225 QYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQH----QAGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYR 424
BLAST of mRNA_L-elsbetiae_contig10058.103.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 124 bits (311), Expect = 9.470e-27 Identity = 94/225 (41.78%), Postives = 127/225 (56.44%), Query Frame = 3 Query: 501 GRFDIAAHGGDNQQVEIMGMLTSAG-VVDTGVALVAAACGRESSAVKFLLQQWGQKASSDGAGYLETTNDT-GATPLVCSIE--ACLPCSPRIARLLVDAGANITTAVRLTDPAGRFFFNG-TALAFLDQVRCVRMLPGKDAAESQLHSLEATRRLLLRVEAVHAVSWLWARDVLSVTRTASEGTGGATSTTS--TPLISVLPVLRRRAGRPRVLLAALFRHSGK 1154 G + D + +E M +L AG VVDTG AL+ AA + AVKFLL+ + +D Y+ T D G TP++C+++ A CSP+I RLLVDAGAN T AV +T R+ T LAF ++ + G+ A + QL L+ TR LL R EAVHAVSWLWA A+ T T++T+ TPL ++ P+LRR+ G VLL LFR+S K Sbjct: 215 GGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLR----RRQADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435
BLAST of mRNA_L-elsbetiae_contig10058.103.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 123 bits (309), Expect = 1.110e-26 Identity = 91/208 (43.75%), Postives = 117/208 (56.25%), Query Frame = 3 Query: 540 QVEIMGMLTSAGVVD-TGVALVAAACGRESSAVKFLLQQWGQKASSDGAGYLETTNDTGATPLVCSIEACL--PCSPRIARLLVDAGANITTAVRLTDPAGRFFFNGTALAFLDQVRCVRMLPGKDAAESQLHSLEATRRLLLRVEAVHAVSWLWARDVLSVTRTASEGTGGATSTTSTPLISVLPVLRRRAGRPRVLLAALFRHSGK 1154 QV+IM ML AGVVD G+AL+AA + +AV FLL+Q ++ + +D G T L+ S PC+PRI R LVDAGA+ T+AV+L R N T L +++ A + QL LEATRR+LLRV AVHAVSW+W D + R A+ S T L +VLPVLRRRAGR +L LFR+S K Sbjct: 202 QVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTSYVNIAR--DDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQ--LTTVLPVLRRRAGRRALLWDTLFRYSKK 405
BLAST of mRNA_L-elsbetiae_contig10058.103.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 121 bits (303), Expect = 7.700e-26 Identity = 95/209 (45.45%), Postives = 117/209 (55.98%), Query Frame = 3 Query: 537 QQVEIMGMLTSAGVVDTGVALVAAACGRESSAVKFLLQQWGQKASSDGAGYLETTNDT-GATPLVCSIEACLPCSPRIARLLVDAGANITTAVRLTDPAGRFFFNGTALAFLDQVRCVRMLPGKDAAESQLHSLEATRRLLLRVEAVHAVSWLWARDVLSVTRTASEGTGGATS----TTSTPLISVLP-VLRRRAG-RPRVLLAALFR 1142 Q V+IMG+LT GVVDTG ALV AA +VKFLLQ + GA Y+ T D G TPLVC+IEAC SPRIAR L+DA A+ + V +T T L F + K+A E QL SL+A RLL +V+AVHAVSWLW S TR S G A+S T + PL+ +P VLR G R V+L A++R Sbjct: 215 QDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQH----QAGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRS---SDTRN-SYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10058.103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10058.103.1 >prot_L-elsbetiae_contig10058.103.1 ID=prot_L-elsbetiae_contig10058.103.1|Name=mRNA_L-elsbetiae_contig10058.103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp MGMLTSAGVVDTGVALVAAACGRESSAVKFLLQQWGQKASSDGAGYLETTback to top mRNA from alignment at L-elsbetiae_contig10058:178..3160- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10058.103.1 ID=mRNA_L-elsbetiae_contig10058.103.1|Name=mRNA_L-elsbetiae_contig10058.103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2983bp|location=Sequence derived from alignment at L-elsbetiae_contig10058:178..3160- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10058:178..3160- >mRNA_L-elsbetiae_contig10058.103.1 ID=mRNA_L-elsbetiae_contig10058.103.1|Name=mRNA_L-elsbetiae_contig10058.103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1224bp|location=Sequence derived from alignment at L-elsbetiae_contig10058:178..3160- (Laminarionema elsbetiae ELsaHSoW15)back to top |