prot_L-elsbetiae_contig1087.796.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1087.796.1
Unique Nameprot_L-elsbetiae_contig1087.796.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length530
Homology
BLAST of mRNA_L-elsbetiae_contig1087.796.1 vs. uniprot
Match: A0A6H5J9W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W9_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 6.720e-97
Identity = 287/617 (46.52%), Postives = 342/617 (55.43%), Query Frame = 0
Query:    1 VASVGGEYSEIVETSCGASVFAAGTTIYELSGYD-LEPRILEVWDLSA-DDCTIEDVPSTADCFSGVMDMSLGDGITMTLTNCFCVFTEGLSTFYRSKVSANVVGASTISIPSGEIEVCLDAGFISQLVTAEVEGETFLYNFDLVVPGMDSSADLSV-ASVSAAAQSFICGEVE----PTPSPV----------SPTPEXTTVAPVVXXXXXXXXXXXXXXXXXXXXXXXXXXVTPIPXXXXXXXXXXXXXXXXXXXATGAPEPALPETAPPXAAAVGSAXXVALPSP----------------------------------------------------------APSPLPGAGDTPAPEAIVATSEGASSSTVLAPGETLAPSAGAGVDGS--------ASPTAVATTLAPTERSRSAATVAPVDGEDVEGRECELPEEDSCTSVTAVVQ-INQGIGSFYDPACSPT----TEGGELPEGCEPNSPGSCRICLFNTPRWETKNPGGELPDWVDCPCCVLAVYQEDTATNADGPRCECERMNVHSAGRHQRSGEVITPAPTVGTPPPSTDGPVSDTDMAAGLFEDKPLRVSEGGLDLGLVALAVLGVLTFFPVCVK 529
            V SV G++SEI ETSCG SV A G+T+YELSG   L  R LE  ++S+ DDC+I  VPSTA+C++G   M+L   ++M LT C C + +G  T YRS+V A VVGAS +S+P  EIE+CL+AGFI QL TA VEGE + YNFDLVVPG DSS+DLSV A+    AQ+FICGE+E    PTPSPV           P PEX       XXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXX                       XXVA P+P                                                          AP  LP   +TPAP   V    G +SS         AP++  GVDG          +PT+VAT+    E            G ++EG+EC +PE   CTS  +     NQG+GSFYDP C+      +E GELPEGC+P+S  SCR CLFNTPRW+ KNPG +LPD VDCPCCVL +Y+EDTA N DG RCE                  +TPAP   T  PST  P++ T     LFEDKPL +  G LD G+VAL +L +LTFFPVCVK
Sbjct:  145 VVSVDGDHSEIAETSCGTSVMAVGSTVYELSGDGALGSRSLEAVEMSSSDDCSITGVPSTAECYTGDTAMALDGDVSMALTICLCYYMDGSRTVYRSQVFAEVVGASAVSVPGDEIEICLEAGFIMQLTTATVEGEDYHYNFDLVVPGRDSSSDLSVSAAPDEDAQAFICGELEELEEPTPSPVXXXXXXXEPTEPPPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXVAAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPV-LPLPVETPAPSPAV---RGLASS---------APTS-VGVDGGXXXXXXXXVAPTSVATSTGEGE------------GNNMEGQECMIPEGAPCTSTASTFSHTNQGVGSFYDPTCAAAAATASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCVLDIYKEDTAINEDGVRCEW-----------------MTPAPVASTSEPSTVVPLTITRTEL-LFEDKPLNLGGGSLDAGVVALGLLALLTFFPVCVK 702          
BLAST of mRNA_L-elsbetiae_contig1087.796.1 vs. uniprot
Match: D8LE44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE44_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 3.770e-61
Identity = 190/434 (43.78%), Postives = 231/434 (53.23%), Query Frame = 0
Query:   22 AAGTTIYELSGYD-LEPRILEVWDLSA-DDCTIEDVPSTADCFSGVMDMSLGDGITMTLTNCFCVFTEGLSTFYRSKVSANVVGASTISIPSGEIEVCLDAGFISQLVTAEVEGETFLYNFDLVVPGMDSSADLSVASVSAAAQSFICGEVEPTPSPVSPTPEXTTVAPVVXXXXXXXXXXXXXXXXXXXXXXXXXXVTPIPXXXXXXXXXXXXXXXXXXXATGAPEPALPETAPPXAAAVGSAXXVALPSPAPSPLPGAGDTPAPEAIVATSEGASSSTVLAPGETLAPSAGAGVDGSASPTAVATTLAPTERSRSAATVAPVDGEDVEGRECELPEEDSCTSVTAVV-QINQGIGSFYDPACSPT----TEGGELPEGCEPNSPGSCRICLFNTPRWETKNPGGELPDWVDCPCCVLAVYQEDTATNADGPR 448
            A G+T+YELSG   L  R LE  ++S+ DDC+I  VPSTA+C++G   M+L   ++MTLT C C + +G  T +RS+V A VVGAST+S+P  EIE+CL+AGFI QL TA VE E + YNFDLVVPG DSS+DLSV++                 +P      X       XXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXX                                                                                                        G ++EG+EC +PEE  CTS  A +   NQG+GS+YDP C+      +E GELPEGC+P+S  SCR CLFNTPRW+ KNPG +LPD VDCPCCV+ VY+EDTA + DG R
Sbjct:    2 AVGSTVYELSGDGALGSRSLEAVEMSSSDDCSITGVPSTAECYTGDTAMTLDGDVSMTLTICLCYYMDGSKTIFRSQVFAEVVGASTVSVPDDEIEICLEAGFIMQLTTATVEDEDYYYNFDLVVPGRDSSSDLSVSA-----------------APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------GNNMEGQECMIPEEAPCTSTAATIAHTNQGVGSYYDPTCAAAAATASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCVVDVYKEDTAISEDGVR 317          
BLAST of mRNA_L-elsbetiae_contig1087.796.1 vs. uniprot
Match: A0A6H5J9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X3_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 1.230e-55
Identity = 217/542 (40.04%), Postives = 285/542 (52.58%), Query Frame = 0
Query:    1 VASVGGEYSEIVETSCGASVFAAGTTIYELSGY-DLEPRILEVWDLS-ADDCTIEDVPSTADCFSG-VMDMSLGDGITMTLTNCFCVFTEGLSTFYRSKVSANVVGASTISIPSGEIE-VCLDAGFISQLVTAEVEGETFLYNFDLVVPGMDSSADLSVA-SVSAAAQSFICGEVEP--TPSPVSPTPEXTTVAPVVXXXXXXXXXXXXXXXXXXXXXXXXXXVTPIPXXXXXXXXXXXXXXXXXXXATGAPEPALPETAPPXAAAVGSAXXVALPSPAPSPLPGAGDTPAPEAIVATSEGASSSTVLAPGETLAPSAGAGVDGSASPTAVATTLAPTERSRSAATVAPVDGEDVEGRECELPEEDSCTSVTAVVQINQGIGSFYDPACSPTTEGGELPEGCEPNSPGSCRICLFNTPRWETKNPGGELPDWVDCPCCVLAVYQEDTATNADGPRCECERMNVHSAGRHQRSGEVITPAPTVGTPPPSTDGPVSDTDMAAGLFEDKPLRVSEGGLDLG------LVALAVLGVLTFFPVCVK 529
            + SV G+YSEI++TSCG S  A G+T+YELSG  DL+ R+LEV D++ +  C   D P TADC+S     ++L D + + LT    ++TE  STFY+S  +  V G + +     E E  C +  F+SQ+    V G T+ YNF+  +PG  +S+DLSV+ + S++A++FICGE  P  TPSPV+P+          XXXXXXXXXXXXXXXXXXXXXXXXXX T I           XXXXXXXXX T AP+ A   TA P        XX A  + A   LP  G+                        T  P  G G D +A+P+     L    ++ S       D ED EG  C LPE   CT  T+    N+GIG +YDPAC    EG E   GC  ++   CR+C FNTP +  K+P  +LPD+ DCPCCVL +Y++D A N DG RC                    +PAP+    P  T+ PV +       F+D  L   +GG ++       L AL +L  LTFFP C K
Sbjct:  101 IVSVDGDYSEILDTSCGTSAVAVGSTVYELSGAGDLDSRVLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTEDGSTFYKSFTNTKVFGTTVVEY---EFESFCYENEFLSQVFLVTVLGTTYKYNFEFALPGEPTSSDLSVSGAASSSAEAFICGEDLPATTPSPVTPS--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAI-------AAAAXXXXXXXXXXTEAPQAAAAATAAPVXXXXXXXXXPANTTTAAPTLPAVGNV----------------------MTETPVGGGGDDLAATPSPTVLVLVNNTQAPS------FDYED-EGA-CILPESKPCTEATSFSNTNEGIGDYYDPACE-LVEGEEQLGGCNADASSLCRMCFFNTPLYVAKHPDEDLPDYPDCPCCVLDIYEQD-AFNLDGQRCVS-----------------ASPAPSS---PALTEIPVGEITPRG--FDD--LSFDDGGWEMNAGEVAALSALGLLAALTFFPFCSK 568          
BLAST of mRNA_L-elsbetiae_contig1087.796.1 vs. uniprot
Match: A0A6H5JBT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT9_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 5.720e-40
Identity = 192/598 (32.11%), Postives = 246/598 (41.14%), Query Frame = 0
Query:    1 VASVGGEYSEIVETSCGASVFAAGTTIYELSGYDLEPRILEVWDLSADDCT----IEDVPSTADCFSGVMDMSLGDGITMTLTNCFCVFTEGLSTF-YRSKVSANVVGASTISIPSGEIEVCLDAGFISQLVTAEVEGETFLYNFDLVVPGMDSSADLSVAS-VSAAAQSFICGEVEP-------------------TPSPVSPTPEX--TTVAPVVXXXXXXXXXXXXXXXXXXXXXXXXXXVTPIPXXXXXXXXXXXXXXXXXXXATGAPEPALPETAPPXAAAVGSAXXVALPSPAPSPLPGAGDTPAPEAIVATSEGASSSTVLAPGETLAPSAGAGVDGSASPTAV-----------------------------------------ATTLAPTERSRSAATVAPVDGEDVEGRECELPEEDSCTSVTAVVQINQGIGSFYDPACSPTTEGGELPEGCEPNSPGSCRICLFNTPRWETKNPGG-ELPDWVDCPCCVLAVYQEDTATNADGPRCECERMNVHSAGRHQRSGEVITPAPTVGTPPPSTDGPVSDTDMAAGLFEDKPLRVSEGGLDLGLVALAVLGVLTFFPVCVK 529
            VA V GEYSE+VETSCG+S    G+T+YELSG D   R L V DLSADDC     I   PS ADC+SG   + +       LT C C + EG +   Y + V A+V     IS+P   + +C D G  SQLVT   +  +F Y FDL VPG +S+ DL V+S  S+ AQ+  C   E                    TPSP +   E   TT APV XXXXXXXXXXXXXXX                                                 P ++  G     +  + AP  +    DTPAP             T  + G      + A VD   +PT                                           A T  PT    S  T+AP+  E++E   C  P +  CT+ T    IN+G+G++YDP CS          GC     G CR C FN    E  N    ++PD+ +CPCCV+  Y      +AD  RC                    TP+P  GT    T+       +    FEDKPL +S GG    + ALA+ G+LTF P+C K
Sbjct:  113 VAKVEGEYSEVVETSCGSSAILVGSTVYELSGVDFGGRSLGVADLSADDCAGDGVIPTAPSDADCYSGESPIDVEGSTGAELTFCHCKWNEGENVAKYATNVRASVKDYVDISVPDSGLVMCQDQGVFSQLVTVLADDSSFYYLFDLDVPGYESAEDLVVSSGPSSDAQALACSVDEEGXXXXXXXXXXXXXXXXXETPSPTTAVEEEPQTTPAPVTXXXXXXXXXXXXXXXSLQ----------------------------------------------PDSSTAGQGATSSSTTAAPVEV----DTPAP-------------TPASRGLGTPXXSSAAVDAPPAPTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVTPGPTVVLYSE-TLAPLTEEELEQVACTWPLDGPCTTETLFSDINRGLGAYYDPGCSGA--------GCGVGDSGLCRTCYFNLTMGEEGNDDDVDMPDYPECPCCVMDEYDR----SAD--RCV-----------------GATPSPAQGT---GTEA------LETYSFEDKPLDMS-GGEGFAVAALALFGLLTFLPLCTK 605          
BLAST of mRNA_L-elsbetiae_contig1087.796.1 vs. uniprot
Match: D8LE46_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE46_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 3.370e-19
Identity = 58/145 (40.00%), Postives = 85/145 (58.62%), Query Frame = 0
Query:    1 VASVGGEYSEIVETSCGASVFAAGTTIYELSGY-DLEPRILEVWDLS-ADDCTIEDVPSTADCFSG-VMDMSLGDGITMTLTNCFCVFTEGLSTFYRSKVSANVVGASTISIPSGEIE-VCLDAGFISQLVTAEVEGETFLYNFD 141
            + SV G+YSEI++TSCG S  A G+T+YELSG  DL+ R LE+ D++ +  C   D P TADC+S     ++L D + + LT    ++TE  STFY+S  +  V G + +     E E  C +  F+SQ+    V   T+ YNF+
Sbjct:    3 IVSVDGDYSEILDTSCGTSAVAVGSTVYELSGVGDLDSRGLELLDMTPSSTCVTADTPDTADCYSASTTTVTLTDDVYVELTFNIGIWTEDGSTFYKSFTNTKVFGTTVVEY---EFESFCYENAFLSQVFFVTVLDTTYKYNFE 144          
BLAST of mRNA_L-elsbetiae_contig1087.796.1 vs. uniprot
Match: D8LE45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE45_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 2.100e-8
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 0
Query:  405 ICLFNTPRWETKNPGGELPDWVDCPCCVLAVYQEDTATNADGPRCECERMNVHSAGRHQRSGEVITP 471
            +C FNTP +  K+P  +LPD+ DCPCCVL +Y++D A + DG R     M + +    QR   V TP
Sbjct:    1 MCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQD-AFSLDGQRFP---MLLLARAHRQRPCSVTTP 63          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1087.796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5J9W9_9PHAE6.720e-9746.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE44_ECTSI3.770e-6143.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9X3_9PHAE1.230e-5540.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBT9_9PHAE5.720e-4032.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE46_ECTSI3.370e-1940.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LE45_ECTSI2.100e-843.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 192..208
score: 42.35
coord: 227..248
score: 45.45
coord: 173..185
score: 44.62
coord: 212..224
score: 52.31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..509
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 529..529
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 510..528
NoneNo IPR availableTMHMMTMhelixcoord: 506..528

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1087contigL-elsbetiae_contig1087:15995..24734 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1087.796.1mRNA_L-elsbetiae_contig1087.796.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1087 15995..24734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1087.796.1 ID=prot_L-elsbetiae_contig1087.796.1|Name=mRNA_L-elsbetiae_contig1087.796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=530bp
VASVGGEYSEIVETSCGASVFAAGTTIYELSGYDLEPRILEVWDLSADDC
TIEDVPSTADCFSGVMDMSLGDGITMTLTNCFCVFTEGLSTFYRSKVSAN
VVGASTISIPSGEIEVCLDAGFISQLVTAEVEGETFLYNFDLVVPGMDSS
ADLSVASVSAAAQSFICGEVEPTPSPVSPTPEPTTVAPVVLPTAPPTPEP
TPEPTPEPTPEPTPAPVTPIPPTPIPIAPVPPTPIPVAPVATGAPEPALP
ETAPPTAAAVGSAAPVALPSPAPSPLPGAGDTPAPEAIVATSEGASSSTV
LAPGETLAPSAGAGVDGSASPTAVATTLAPTERSRSAATVAPVDGEDVEG
RECELPEEDSCTSVTAVVQINQGIGSFYDPACSPTTEGGELPEGCEPNSP
GSCRICLFNTPRWETKNPGGELPDWVDCPCCVLAVYQEDTATNADGPRCE
CERMNVHSAGRHQRSGEVITPAPTVGTPPPSTDGPVSDTDMAAGLFEDKP
LRVSEGGLDLGLVALAVLGVLTFFPVCVK*
back to top