prot_L-elsbetiae_contig10864.793.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10864.793.1
Unique Nameprot_L-elsbetiae_contig10864.793.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length306
Homology
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BLAST of mRNA_L-elsbetiae_contig10864.793.1 vs. uniprot
Match: D8LQT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT9_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.130e-22
Identity = 84/166 (50.60%), Postives = 96/166 (57.83%), Query Frame = 0 
Query:   10 EGEEETSLDLIGVEAARANASRWRGSAVARLRDLDMSKTSGRPPSLFGIPERHHRGSSVPSAPAIGGQTKTAAAAAAFSDDELRDDRLMEGQRLQLHVAVDPPSQLSASSARAAQFSVRRTGAGVVRFAAPYSSSCTSPTRSSPMAQRGGIKGRRLQTTTATGVSA 175
            EGE    LDL+GVEAARA  SRWRGSA     D+DMSK   RP SLFGIPERH R +    AP+ G       AAAAF+DDELRDDRLMEGQRLQLHV        S S+A      V+      VRF A  SS   +PT  SP+     + GRR  T+  T  +A
Sbjct: 1855 EGEGSPRLDLVGVEAARAKLSRWRGSAAVPPLDVDMSKIQSRPSSLFGIPERHVRHA----APSGG-------AAAAFTDDELRDDRLMEGQRLQLHVG-------SGSTATPRPRLVQG-----VRFGAARSS--RTPTLLSPLLLAMPLPGRRANTSAVTPTAA 1995
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10864.793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQT9_ECTSI1.130e-2250.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10864contigL-elsbetiae_contig10864:2173..5757 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10864.793.1mRNA_L-elsbetiae_contig10864.793.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10864 2139..5881 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10864.793.1 ID=prot_L-elsbetiae_contig10864.793.1|Name=mRNA_L-elsbetiae_contig10864.793.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=306bp
MRGAASEEAEGEEETSLDLIGVEAARANASRWRGSAVARLRDLDMSKTSG
RPPSLFGIPERHHRGSSVPSAPAIGGQTKTAAAAAAFSDDELRDDRLMEG
QRLQLHVAVDPPSQLSASSARAAQFSVRRTGAGVVRFAAPYSSSCTSPTR
SSPMAQRGGIKGRRLQTTTATGVSAQAATTQQQEEVEANNRSGDEPRAIS
RAPTGLSASRTQNGELGGCGVGADRHGKKKNRLAAVVLLLGGVTRGRNCS
RRQTFAGEHLPSAAAAAAAEAAAAQAQAGGGGEEEFLNGTRMKDDDVIAR
RTLGR*
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