mRNA_L-elsbetiae_contig10847.780.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: D8LH72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH72_ECTSI) HSP 1 Score: 421 bits (1082), Expect = 3.610e-142 Identity = 207/231 (89.61%), Postives = 218/231 (94.37%), Query Frame = 2 Query: 209 LPGHRQVPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVTAAAVAIDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIERRT 901 L G VPDDDRAQEIGYAASFM+LVGSDFSWEG+GQVMHYDTTIPT IGAVTAAAV IDVWKR+GCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDM+++FL+GNG+HRILVWLLAGVAGEGLVHRQMIASDPRQA+AFLQM RNR+ G LDPEDD ERVQWAFNEARALLKDNE AFEALR+RLE GGATVGDCVSIIERRT Sbjct: 145 LRGLVPVPDDDRAQEIGYAASFMVLVGSDFSWEGIGQVMHYDTTIPTVIGAVTAAAVGIDVWKRSGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMKETFLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAFAFLQMVRNREDGFELDPEDDSERVQWAFNEARALLKDNEGAFEALRRRLEGGGATVGDCVSIIERRT 375
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A835Z355_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z355_9STRA) HSP 1 Score: 247 bits (631), Expect = 2.260e-74 Identity = 124/230 (53.91%), Postives = 165/230 (71.74%), Query Frame = 2 Query: 230 PDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVTAAAVAIDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAAD-PDMEDSFLSGN--GIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDI-----GCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIER 895 P DDR ++ +A +F+ +VG DF+ +G+ V+ +D T+P + TA AVA+D+++ S+ VL G++RLF +DV RESRAEAGAFL Y+TGLPCFAF+P+ +EALRM P+++++F SG G HR LVWLL+ VAGE L HRQ+I SDPRQA FL +AR R + D EDD V+WAFNEAR LL+DNE FEALR+RLE+GGATVG+CVS+I+R Sbjct: 139 PSDDRGGDLMHAGAFLGVVGFDFAGDGLAPVLDFDATVPAILSLATAGAVALDIFQGGAERSRRVLAGLSRLFTRDVSRESRAEAGAFLAGYLTGLPCFAFKPNVLEALRMVEGMPELKEAFQSGGAGGAHRTLVWLLSAVAGEHLTHRQLIVSDPRQATTFLLLARERGLLPSCGDAAADAEDDEMAVRWAFNEARELLRDNEGMFEALRQRLETGGATVGECVSLIDR 368
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A0G4G463_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G463_VITBC) HSP 1 Score: 187 bits (476), Expect = 6.670e-51 Identity = 96/225 (42.67%), Postives = 144/225 (64.00%), Query Frame = 2 Query: 227 VPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMH--YDTTIPTAIGAVTAAAVAIDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIER 895 +P+D R++++ A++FM VG+ E +G ++ +D PT AAA D+ K G SK V+ G+ RL + D ER+ R E+ AFL AY+ GLPCF F+P+ +EAL+MA DP + L+ GI ++LVWLLAGVA E L H + I +DPRQ+ AF+++ R++D +D E RV+WAF++A LL+ + + LR+R+ES ATVGDCV+ +E+ Sbjct: 195 MPEDSRSKDVVVASAFMGYVGTGVGAETLGDYIYGDFDEIYPTVALLALAAAGVYDIVKGGGVVSKSVVAGLKRLLVDDKERQCRVESAAFLVAYLLGLPCFCFRPNVLEALKMAEDPRIRMDLLTPAGIDKLLVWLLAGVAAENLQHPECIVADPRQSDAFVKLMRDKDYLKGVDDETASLRVKWAFHKATNLLRKHRRVHDELRRRMESKAATVGDCVTFLEK 419
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A4D9D6H3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6H3_9STRA) HSP 1 Score: 171 bits (432), Expect = 4.820e-45 Identity = 93/226 (41.15%), Postives = 137/226 (60.62%), Query Frame = 2 Query: 227 VPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVTAAAVAIDVW---KRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAAD-PDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIE 892 VP D R E+ + + +VG S E VG ++H DTT A V A + VW +R G + L G+NRLFL+D ER++ +A FL+AY+ GLPCF F P+ +EA+RM A P ++ S G++R+LV+LLA VA E + Q++ASD RQA A LQ+ R + ++ + WA+ EA+ LL+ + + E L++R+ESGGATVGDCV+++E Sbjct: 148 VPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTT---AASVVLGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAFAETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVYMGRGEARGQEGREEEVLLPWAYEEAKRLLRSHSALLERLKQRMESGGATVGDCVALLE 370
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: W7U4H7_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4H7_9STRA) HSP 1 Score: 171 bits (432), Expect = 6.980e-44 Identity = 93/226 (41.15%), Postives = 137/226 (60.62%), Query Frame = 2 Query: 227 VPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVTAAAVAIDVW---KRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAAD-PDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIE 892 VP D R E+ + + +VG S E VG ++H DTT A V A + VW +R G + L G+NRLFL+D ER++ +A FL+AY+ GLPCF F P+ +EA+RM A P ++ S G++R+LV+LLA VA E + Q++ASD RQA A LQ+ R + ++ + WA+ EA+ LL+ + + E L++R+ESGGATVGDCV+++E Sbjct: 279 VPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTT---AASVVLGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAFAETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVFMGRGEARGQEGREEEVLLPWAYEEAKRLLRSHSALLERLKQRMESGGATVGDCVALLE 501
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A7S1XSQ6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSQ6_9STRA) HSP 1 Score: 165 bits (418), Expect = 7.570e-44 Identity = 92/238 (38.66%), Postives = 143/238 (60.08%), Query Frame = 2 Query: 209 LPGHRQVPDDDRAQEIGYAASFMMLVGSDFSWEGV------GQVMHYDTTIPTAIGAVTAAAVAIDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRM--AADPDMEDSF-LSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDI-GCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIE 892 L G +P DDR +E+ + +FM G E ++H +P A+ A++AAA ID+W R G T + +G++RLF KD ER++R E+ + + Y+ GLPCFAF+PS EAL + A D M+++ + ++R+LVWLLA VAGE + Q++ASDPRQA AFL + R R + G P++ + V+WA+ EAR L++ NE + + +R+E+ +VGDC +I + Sbjct: 60 LEGLAPLPSDDRLKELWLSLAFMGYCGVGVGLEAAIPFTDDPNLLH-SGLLPDAMLALSAAAAGIDIWGRQGKTLLELRSGLSRLFYKDSERDARCESASLVVGYLLGLPCFAFRPSVQEALALLDAEDAAMQEALPRNAATVNRLLVWLLAPVAGEDTKYSQLLASDPRQAAAFLSLVRARGVDGAAYSPDEAGDMVKWAYGEARKLVRTNEVLIDRISERMETMQGSVGDCAAICD 296
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A7S2H157_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H157_9STRA) HSP 1 Score: 166 bits (421), Expect = 5.320e-43 Identity = 90/245 (36.73%), Postives = 142/245 (57.96%), Query Frame = 2 Query: 224 QVPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVTAAAVAIDVWKR------------------AGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNR--DIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIERR 898 +VP D R E+ +A SF+ + + W + ++H + +PT V + D + G ++++L G+NRLF +D+ RE R EA +FL AY+ GLP F+ P+ +EA+++ +++S ++ GI+RILVWLLA VA E HRQ+I SDPR A A L++ R R D+G + EDD RV+ A ++A LL + + +ALR+R+ESG ATVG+CV ++E++ Sbjct: 182 EVPIDSRELEVTFALSFVAFISASVGWGSIAPILHQEPLVPTWATFVAVLLLLADNFNALVSISKDGNFQLATLPQIGGDGTRVLLAGLNRLFTRDLTRECRCEAASFLVAYVLGLPSFSLNPTTLEAIKLTDVEPIKESLMTDAGINRILVWLLASVAVENAQHRQLIVSDPRNAPALLRLLRERGVDVG---EEEDDALRVRHALSQADLLLTRHGATLDALRERMESGAATVGNCVGLLEKQ 423
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A8J2WW41_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WW41_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.720e-31 Identity = 85/225 (37.78%), Postives = 114/225 (50.67%), Query Frame = 2 Query: 224 QVPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVT-AAAVAIDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIER 895 ++P DDRA E A + + VG E + D P V AAA D + G +K G++RL +D RE+ EA +F Y GLPCFAF P+AVEA A + D + N + +LVWL A VA E HR+++ASDPRQA AFL + R R G D + + +WA +A LL+ + E L ESG AT GD V+ +ER Sbjct: 144 ELPTDDRATETAAALAALACVGFPALAEVAASITGGDAPGPATFTLVADAAAFGADAYLLGGEIAKKAGAGVDRLLARDARREAECEAASFDLGYRLGLPCFAFSPTAVEAANAA----VVDGSVDENRVRALLVWLCAPVACERRKHRKLLASDPRQAVAFLTLLRGR--GQFTDVNSNEDNARWALGDAARLLESRTRSVEELADFFESGVATAGDVVARLER 362
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A7S2KXP3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXP3_9STRA) HSP 1 Score: 126 bits (317), Expect = 7.650e-29 Identity = 91/296 (30.74%), Postives = 144/296 (48.65%), Query Frame = 2 Query: 158 RREMSEFVKHFVAVHACLPGHRQVPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPT---AIGAVTAAAVAIDVWKRAGCTSKMV-------------------------LNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAA---------DPDME---------DSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNR----DIGCTLDPEDDPERVQWAFNEARALLK-DNESAFEALRKRLESGGATVGDCVSIIE 892 +R+++++ + L ++P DDRA EI A S + + + F + + ++ P + A+ + V + + T+ +V + G NRLF +D ER AEA AFL AY GLPCFAFQP+A+EA +A DP++ D LS G+ ++L+WL A VA E H Q++ SDPR+A +FL RN+ +IG ++ ++ + ++WA+ EA L + DN +AL + L SG +T+GD V IIE Sbjct: 65 QRDLTQYPTNQPKKQQRLSNVPKIPTDDRASEISSALSVLSVAAACFLADPLAKLFGGTDAGPLPNLVLFAIISVGVLDNFYDVLSGTANLVDKAPKMPEKGNLPLGLGNGQLTSNFVAGFNRLFTEDTERACEAEAAAFLAAYSLGLPCFAFQPNALEAAILAIESSQQPATDDPNINYLPPNSTNLDPLLSNEGVIKLLIWLYAPVAYENSKHPQLLYSDPREAASFLDRIRNKLSSSNIGHSVAIDEADDLMKWAYAEADMLQRQDNGQKLQALSEGLASGASTLGDIVGIIE 360
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: B7GB00_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GB00_PHATC) HSP 1 Score: 125 bits (314), Expect = 1.320e-27 Identity = 70/177 (39.55%), Postives = 100/177 (56.50%), Query Frame = 2 Query: 401 AGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDME----DSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARN---------RDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIE 892 +G + V+ G RL D ERES EA A LTAY TGLPCFA++P+A+EA + + DS LS GI R+LVWLLA VA E I S+PR+A +FL +I T + ++ + ++WA+ EA LL++N + + +RL G ATVGDC++++E Sbjct: 320 SGQLTGSVVRGFARLLTTDAERESLCEASALLTAYCTGLPCFAYRPNALEASVLVVESTKNSNGMDSLLSSAGIMRVLVWLLAPVAAESAKFPVCIVSNPREAESFLDRLEEFAAKDPSLADEIFWTGNKQERKDLLKWAYTEADLLLRENRKILQEVTERLTGGAATVGDCIAVLE 496 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10847.780.1 >prot_L-elsbetiae_contig10847.780.1 ID=prot_L-elsbetiae_contig10847.780.1|Name=mRNA_L-elsbetiae_contig10847.780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp MSEFVKHFVAVHACLPGHRQVPDDDRAQEIGYAASFMMLVGSDFSWEGVGback to top mRNA from alignment at L-elsbetiae_contig10847:5..2562- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10847.780.1 ID=mRNA_L-elsbetiae_contig10847.780.1|Name=mRNA_L-elsbetiae_contig10847.780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2558bp|location=Sequence derived from alignment at L-elsbetiae_contig10847:5..2562- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10847:5..2562- >mRNA_L-elsbetiae_contig10847.780.1 ID=mRNA_L-elsbetiae_contig10847.780.1|Name=mRNA_L-elsbetiae_contig10847.780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig10847:5..2562- (Laminarionema elsbetiae ELsaHSoW15)back to top |