mRNA_L-elsbetiae_contig1084.776.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1084.776.1 vs. uniprot
Match: D8LLJ1_ECTSI (Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ1_ECTSI) HSP 1 Score: 456 bits (1172), Expect = 1.220e-153 Identity = 229/375 (61.07%), Postives = 278/375 (74.13%), Query Frame = 1 Query: 1 SKQAWTAPVARGLHGSGAALQPADIVGDSKNV----------WKTPTQMLNSVTSRSYNSSPVGSAMGVQVSDDVEELAGEEAP--KAHTCSDPNCSHASHNHL------------------EVDSDNASEDVGATFGAGTRQMSTAGGL-SGPPASHPVWNKPSLSHLIENNKKWVAGVKSEDPDYFKRLASIHTPEHLFIGCSDARLSVQSMLGLSPGEIFIHRNVANMVMHNDLSMLTVLTYAVDYLKVKNVIVCGHYECGGVRASMANNDHGLIENWIMGVKEVARTHSEELLALKDDELIHRRLVELNVQEQCLKLYNTPVLQKAHAEKGGPHVHGMVFDVGEGLVKELDVDFKSLVNKNSAIFSMYDFS 1032 SKQAWT P++R LHG+GAALQP I+G NV W +P ML ++SR Y GSA+GVQVS DVEELAGEE P K C+ PNC + D+D+A ++VGATFG+G RQMS+ + +GPP H +W KPSL +++ NKKWVA VK+EDPD+FKRLASIHTPEH FIGCSD+RLSV++MLG PGE+FIHRN+AN MHND+S+L L YAVDYL VKN+I+CGHYECGGVRA+MANNDHGL+ENW+MGVKEVAR H +EL+AL DDELIHRRLVELNVQEQC+KL+NTP+LQKAHAE+GGPHVH ++FD+ EGL+KELDVD ++LV + S SMYDFS Sbjct: 18 SKQAWTTPLSRSLHGAGAALQPVTIIGQPSNVVSDTTMIKKVWNSPGAMLQDISSRKY-----GSALGVQVSTDVEELAGEEPPSKKGKVCTGPNCCXXXXXXXXXXXXXXXXXXXXXXXEEDSDADSAVQEVGATFGSGRRQMSSKATVQAGPPDGHAMWQKPSLDKVMDANKKWVANVKAEDPDFFKRLASIHTPEHFFIGCSDSRLSVEAMLGCGPGEVFIHRNIANQFMHNDVSILASLHYAVDYLGVKNIILCGHYECGGVRAAMANNDHGLVENWVMGVKEVARMHQDELMALGDDELIHRRLVELNVQEQCVKLFNTPILQKAHAERGGPHVHAVIFDMAEGLIKELDVDLQALVKRTSHFQSMYDFS 387
BLAST of mRNA_L-elsbetiae_contig1084.776.1 vs. uniprot
Match: A0A835YJA7_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJA7_9STRA) HSP 1 Score: 298 bits (762), Expect = 2.430e-94 Identity = 130/206 (63.11%), Postives = 175/206 (84.95%), Query Frame = 1 Query: 412 LIENNKKWVAGVKSEDPDYFKRLASIHTPEHLFIGCSDARLSVQSMLGLSPGEIFIHRNVANMVMHNDLSMLTVLTYAVDYLKVKNVIVCGHYECGGVRASMANNDHGLIENWIMGVKEVARTHSEELLALKDDELIHRRLVELNVQEQCLKLYNTPVLQKAHAEKGGPHVHGMVFDVGEGLVKELDVDFKSLVNKNSAIFSMYDF 1029 L++NN++WV +EDPD+FK S+H PE+LFIGCSDARLSVQ+MLGL G++F+HRNVAN V++ DL+ +T LTYAV+YLKV+N+I+CGHY+CGGV+A+M N+DHG+IE WIMG+++VAR H +EL A+KD +L+HRR+VELNVQEQ LKLY PV+Q++ A+ G PH+H +VFDVGEGL+KELDVDFK ++ K S ++SMY+F Sbjct: 2 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 207
BLAST of mRNA_L-elsbetiae_contig1084.776.1 vs. uniprot
Match: A0A6S9IM72_HETAK (Carbonic anhydrase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IM72_HETAK) HSP 1 Score: 266 bits (680), Expect = 7.970e-82 Identity = 115/215 (53.49%), Postives = 167/215 (77.67%), Query Frame = 1 Query: 385 VWNKPSLSHLIENNKKWVAGVKSEDPDYFKRLASIHTPEHLFIGCSDARLSVQSMLGLSPGEIFIHRNVANMVMHNDLSMLTVLTYAVDYLKVKNVIVCGHYECGGVRASMANNDHGLIENWIMGVKEVARTHSEELLALKDDELIHRRLVELNVQEQCLKLYNTPVLQKAHAEKGGPHVHGMVFDVGEGLVKELDVDFKSLVNKNSAIFSMYDF 1029 +++KPS L ENN+KWVA K DPDYFK LA +P++LFIGC+D+R+ Q +LGL GE+F+HRNVAN+V++ D+++L VL Y+V+ LKV+++IVCGHYECGG++A+ AN+DHGL+E+W+ ++++ R H+EEL A++ +E HRRLVELNVQEQC+ LY P++QKA P +HG V+D+ EGLVKEL +DFK+ ++K +S+Y+F Sbjct: 33 IFDKPSFEQLFENNRKWVAEQKKNDPDYFKNLAKGQSPKYLFIGCADSRIPAQEVLGLKCGELFVHRNVANLVVNGDMNLLAVLQYSVEVLKVEDIIVCGHYECGGIKAACANHDHGLVEHWLRNIRDINRLHAEELEAIECEEARHRRLVELNVQEQCINLYANPIVQKAQLATSLPRIHGFVYDIAEGLVKELPIDFKAEISKIKQHYSLYNF 247
BLAST of mRNA_L-elsbetiae_contig1084.776.1 vs. uniprot
Match: A0A7S2XTK6_9STRA (Carbonic anhydrase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTK6_9STRA) HSP 1 Score: 257 bits (656), Expect = 4.080e-78 Identity = 114/229 (49.78%), Postives = 163/229 (71.18%), Query Frame = 1 Query: 358 LSGPPASHPVWNKPSLSHLIENNKKWVAGVKSEDPDYFKRLASIHTPEHLFIGCSDARLSVQSMLGLSPGEIFIHRNVANMVMHNDLSMLTVLTYAVDYLKVKNVIVCGHYECGGVRA-SMANNDHGLIENWIMGVKEVARTHSEELLALKDDELIHRRLVELNVQEQCLKLYNTPVLQKAHAEKGGPHVHGMVFDVGEGLVKELDVDFKSLVNKNSAIFSMYDFSKTP 1041 L G H +W+K + ENNKKWV EDPDYFK+L P +LFIGCSD+R+ ++GLS G++F+HRNVAN+V++ D+++L+VL Y+V+ LKV++VIVCGHY CGGV+A S DHGL+E+W+ +K+V R H +EL ++D+E H RLVEL+VQEQC+ L+ P++Q++ G P +HG V+D+G G ++EL++DFK V+K I+S YDFSK P Sbjct: 27 LPGKELYHSIWDKSDFQQIFENNKKWVHKHLEEDPDYFKKLKMGQKPRYLFIGCSDSRVPANEIMGLSAGDVFVHRNVANLVVNGDMNLLSVLQYSVEVLKVRDVIVCGHYGCGGVKAASTIGTDHGLLEHWLRNIKDVIRVHQDELNTIEDEEKRHERLVELSVQEQCINLFANPIVQRSQVTHGYPRIHGFVYDIGNGYLRELEIDFKKEVSKLKDIYSHYDFSKIP 255
BLAST of mRNA_L-elsbetiae_contig1084.776.1 vs. uniprot
Match: A0A835ZBM8_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM8_9STRA) HSP 1 Score: 246 bits (629), Expect = 8.300e-74 Identity = 109/228 (47.81%), Postives = 164/228 (71.93%), Query Frame = 1 Query: 385 VWNKP-SLSHLIENNKKWVAGVKSEDPDYFKRLASIHTPEHLFIGCSDARLSVQSMLGLSPGEIFIHRNVANMVMHNDLSMLTVLTYAVDYLKVKNVIVCGHYECGGVRASMANNDHGLIENWIMGVKEVARTHSEELLALKDDELIHRRLVELNVQEQCLKLYNTPVLQKAHAEKGGPHVHGMVFDVGEGLVKELDVDFKSLVNKNSAIFSMYDFSKTP*SGEKARI 1065 +W+ +L ++ ++NK+WV EDP+ F RL P++L+IGCSD+R+ Q+MLGL+ GE+F+HRNVAN+ ++ D S+L+VLTYAV+ L+V ++IVCGHY CGGVRA+M N DHGL+E+W+M ++ V R H EL + ++E H+RLVELNVQE C+ L+ PV+QK A P +HG V+D+G GL+K+L +DF++ + K I+S+Y+F K+ +G A + Sbjct: 13 IWDTAENLDYIFDSNKRWVQDCLEEDPEIFTRLKYAQAPKYLYIGCSDSRVPAQNMLGLTTGELFVHRNVANLCVNTDYSLLSVLTYAVEVLEVTDIIVCGHYGCGGVRAAMENKDHGLLEHWLMHIRNVQRLHQAELAEIPNEEERHQRLVELNVQEACMNLFANPVVQKKQATDAQPRIHGWVYDIGSGLLKDLKIDFRTEIRKYKNIYSLYEFPKSTIAGASAPV 240
BLAST of mRNA_L-elsbetiae_contig1084.776.1 vs. uniprot
Match: A0A7S1N9X7_9EUGL (Carbonic anhydrase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N9X7_9EUGL) HSP 1 Score: 244 bits (624), Expect = 6.110e-72 Identity = 108/211 (51.18%), Postives = 157/211 (74.41%), Query Frame = 1 Query: 400 SLSHLIENNKKWVAGVKSEDPDYFKRLASIHTPEHLFIGCSDARLSVQSMLGLSPGEIFIHRNVANMVMHNDLSMLTVLTYAVDYLKVKNVIVCGHYECGGVRASMANNDHGLIENWIMGVKEVARTHSEELLALKDDELIHRRLVELNVQEQCLKLYNTPVLQKAHAEKGGPHVHGMVFDVGEGLVKELDVDFKSLVNKNSAIFSMYDFS 1032 +L + ENN+KW ++ DP++FKRL P++LFIGC+D+R+ Q ++G+ GE+F+HRNVAN+V++NDL++L+V+ YAV+ L VK++IVCGHYECGGVRA+ +N DHGL+E+WI +++V R H EL L E+ HRRLVELNVQEQC+ L+ P++Q+ A G P +HGMV+DVGEGL+++LD+DFK + + I+ FS Sbjct: 133 NLETIFENNRKWAEQMRKTDPNFFKRLKQGQEPKYLFIGCADSRIPAQELMGMKAGEMFVHRNVANLVVNNDLNLLSVIAYAVEVLHVKDIIVCGHYECGGVRAAESNKDHGLVEHWIRNIRDVVRLHRNELAVLTG-EMRHRRLVELNVQEQCINLFANPIIQRRQAAHGLPRIHGMVYDVGEGLLRKLDLDFKHSIREMRHIYDTGHFS 342
BLAST of mRNA_L-elsbetiae_contig1084.776.1 vs. uniprot
Match: A0A6H5KCQ9_9PHAE (Carbonic anhydrase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCQ9_9PHAE) HSP 1 Score: 242 bits (618), Expect = 8.950e-72 Identity = 139/276 (50.36%), Postives = 169/276 (61.23%), Query Frame = 1 Query: 1 SKQAWTAPVARGLHGSGAALQPADIVGDSKNV----------WKTPTQMLNSVTSRSYNSSPVGSAMGVQVSDDVEELAGEEAP--KAHTCSDPNCSHASHNHL------------------EVDSDNASEDVGATFGAGTRQMSTAG------GL------------------SGPPASHPVWNKPSLSHLIENNKKWVAGVKSEDPDYFKRLASIHTPEHLFIGCSDARLSVQSMLGLSPGEIFIHRNVANMVMHNDLSMLTVLTYAVDYLKVK 666 +KQAWT P+ R LHG+GAALQP I+G NV W +P ML ++SR Y GSA+GVQVS DVEELAGEE P KA C+ PNC A + D+D+A ++VGATFG+G RQMST G GL +GP H +W KPSL +++ NKKWVA VK+EDPD+FKRLASIHTPEH FIGCSD+RLSV++MLG PGE+FIHRN+AN MHND+S+L L YAVDYL V+ Sbjct: 34 TKQAWTTPLVRSLHGTGAALQPVTIIGQPSNVVSDTTMIKKVWNSPGAMLQDISSRKY-----GSALGVQVSTDVEELAGEEPPSKKAKVCTGPNCCDAPXXXXXXXXXXXXXXXXXXXXEEDSDADSAVQEVGATFGSGRRQMSTKGAYVYGIGLYFYFSHNFRAIQVSATIQAGPSDDHAMWKKPSLDKVMDANKKWVARVKAEDPDFFKRLASIHTPEHFFIGCSDSRLSVEAMLGCGPGEVFIHRNIANQFMHNDVSILASLHYAVDYLGVR 304
BLAST of mRNA_L-elsbetiae_contig1084.776.1 vs. uniprot
Match: A0A1W6IYH0_SACJA (Carbonic anhydrase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A1W6IYH0_SACJA) HSP 1 Score: 242 bits (617), Expect = 1.300e-71 Identity = 106/212 (50.00%), Postives = 156/212 (73.58%), Query Frame = 1 Query: 400 SLSHLIENNKKWVAGVKSEDPDYFKRLASIHTPEHLFIGCSDARLSVQSMLGLSPGEIFIHRNVANMVMHNDLSMLTVLTYAVDYLKVKNVIVCGHYECGGVRASMANNDHGLIENWIMGVKEVARTHSEELLALKDDELIHRRLVELNVQEQCLKLYNTPVLQKAHAEKGGPHVHGMVFDVGEGLVKELDVDFKSLVNKNSAIFSMYDFSK 1035 S+ ++ +NN+ WV G SEDPD FKRLA+ P++L+IGCSD+R+ Q+M+GL+ GE+F+ RNVAN+ ++ D S+L LTYAV+ L+V ++IVCGHY CGGVRA+M N DHGL+E+W++ ++ V R H +EL + D + H+RLVELNVQE C+ L+ P++QK A P +HG V+DV GL+K+LD+DFKS + K ++ +Y+F + Sbjct: 82 SMDYIFQNNRDWVEGTISEDPDTFKRLATSQQPKYLYIGCSDSRVPAQNMMGLTTGELFVVRNVANLCVNTDHSLLAALTYAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNIRNVQRLHLDELKTIPDVDERHKRLVELNVQESCINLFANPIVQKKQATSSQPKIHGWVYDVATGLLKKLDIDFKSEIRKYQDVYRLYEFPR 293
BLAST of mRNA_L-elsbetiae_contig1084.776.1 vs. uniprot
Match: A0A662WWC2_9STRA (Carbonic anhydrase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWC2_9STRA) HSP 1 Score: 234 bits (597), Expect = 1.110e-68 Identity = 98/210 (46.67%), Postives = 154/210 (73.33%), Query Frame = 1 Query: 400 SLSHLIENNKKWVAGVKSEDPDYFKRLASIHTPEHLFIGCSDARLSVQSMLGLSPGEIFIHRNVANMVMHNDLSMLTVLTYAVDYLKVKNVIVCGHYECGGVRASMANNDHGLIENWIMGVKEVARTHSEELLALKDDELIHRRLVELNVQEQCLKLYNTPVLQKAHAEKGGPHVHGMVFDVGEGLVKELDVDFKSLVNKNSAIFSMYDF 1029 S+ HL +NNKKW + DP +F+R+A TP +L+IGCSD+R+ + + GL+PGE+F+HRNVAN+V+ ND++ L+V+ +AV+ LKVK++IVCGHY CGGV+A+M N GL++NW+ +++V R H +EL+AL E +RRLVELN+QEQCL ++ ++Q+ G PH+HG+V+D+ G +KEL+VD++ + K+ ++ ++ F Sbjct: 15 SIQHLFDNNKKWRETMVQRDPTFFERMAVGQTPRYLWIGCSDSRVPAEEVSGLNPGEVFVHRNVANLVVSNDINALSVVQFAVEKLKVKDIIVCGHYGCGGVKAAMKNKQIGLLDNWLRNIRDVCRLHKDELVALPTQEARYRRLVELNIQEQCLNIFKINMVQRRQGRYGHPHIHGLVYDINTGALKELEVDYREYIAKHIGVYRLHTF 224
BLAST of mRNA_L-elsbetiae_contig1084.776.1 vs. uniprot
Match: G4ZL70_PHYSP (Carbonic anhydrase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZL70_PHYSP) HSP 1 Score: 234 bits (597), Expect = 1.290e-68 Identity = 101/210 (48.10%), Postives = 153/210 (72.86%), Query Frame = 1 Query: 400 SLSHLIENNKKWVAGVKSEDPDYFKRLASIHTPEHLFIGCSDARLSVQSMLGLSPGEIFIHRNVANMVMHNDLSMLTVLTYAVDYLKVKNVIVCGHYECGGVRASMANNDHGLIENWIMGVKEVARTHSEELLALKDDELIHRRLVELNVQEQCLKLYNTPVLQKAHAEKGGPHVHGMVFDVGEGLVKELDVDFKSLVNKNSAIFSMYDF 1029 SLSHL+ENN+KW V DP +F+R A +P +L+IGCSD+R+ + + GL+PGE+F+HRNVAN+V+ ND++ L+V+ ++V+ LKV ++IVCGHY CGGV A++ N GL++NW+ +++V RTH EEL K DE RRLVELN+QEQCL ++ ++Q+ G P +HGMV+D+ G++KEL+VD+ + + KN +F +++F Sbjct: 22 SLSHLLENNRKWRDNVLQRDPTFFERTAKAQSPRYLWIGCSDSRVPAEEITGLNPGEMFVHRNVANLVVSNDINSLSVVQFSVEKLKVSDIIVCGHYGCGGVTAALKNAQIGLLDNWLRNIRDVCRTHKEELSQYKTDEERERRLVELNIQEQCLNIFKINMVQRRMGLYGAPRIHGMVYDIRSGVLKELEVDYHAFIAKNMGVFRLHNF 231 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1084.776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1084.776.1 >prot_L-elsbetiae_contig1084.776.1 ID=prot_L-elsbetiae_contig1084.776.1|Name=mRNA_L-elsbetiae_contig1084.776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=310bp MLNSVTSRSYNSSPVGSAMGVQVSDDVEELAGEEAPKAHTCSDPNCSHASback to top mRNA from alignment at L-elsbetiae_contig1084:7968..11893+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1084.776.1 ID=mRNA_L-elsbetiae_contig1084.776.1|Name=mRNA_L-elsbetiae_contig1084.776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3926bp|location=Sequence derived from alignment at L-elsbetiae_contig1084:7968..11893+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1084:7968..11893+ >mRNA_L-elsbetiae_contig1084.776.1 ID=mRNA_L-elsbetiae_contig1084.776.1|Name=mRNA_L-elsbetiae_contig1084.776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1860bp|location=Sequence derived from alignment at L-elsbetiae_contig1084:7968..11893+ (Laminarionema elsbetiae ELsaHSoW15)back to top |