prot_L-elsbetiae_contig10801.751.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10801.751.1
Unique Nameprot_L-elsbetiae_contig10801.751.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length66
Homology
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BLAST of mRNA_L-elsbetiae_contig10801.751.1 vs. uniprot
Match: A0A7J4KB49_9ARCH (HNH endonuclease n=2 Tax=Archaea TaxID=2157 RepID=A0A7J4KB49_9ARCH)

HSP 1 Score: 49.7 bits (117), Expect = 7.750e-6
Identity = 24/61 (39.34%), Postives = 34/61 (55.74%), Query Frame = 0 
Query:    2 RESLFLEQEGQCAFCKTGLRTDPADFDCDHIIPVRCGGPTCMTNLHLLCIRCHREKSARER 62
            R+ L   Q  +C  C   L  D  D+D  HIIP   GG T + N   +C++CHREK+ +E+
Sbjct:   60 RKELKSTQNNKCKICGIELSDDNIDYD--HIIPWEDGGKTIVANGQAICLKCHREKTRKEK 118
[Close]
BLAST of mRNA_L-elsbetiae_contig10801.751.1 vs. uniprot
Match: UPI001F4E2095 (HNH endonuclease n=1 Tax=Gordonia alkanivorans TaxID=84096 RepID=UPI001F4E2095)

HSP 1 Score: 48.9 bits (115), Expect = 8.860e-6
Identity = 22/61 (36.07%), Postives = 32/61 (52.46%), Query Frame = 0 
Query:    1 MRESLFLEQEGQCAFCKTGLRTDPADFDCDHIIPVRCGGPTCMTNLHLLCIRCHREKSARE 61
            +R  + +    +CA C  G   D    +CDH+  V+ GG   + N  LLC+ CHR K+A E
Sbjct:   22 LRAQVIIRDGNRCANC--GANGDTTRLECDHVTNVKRGGDDSLANTQLLCVDCHRTKTAAE 80
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10801.751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7J4KB49_9ARCH7.750e-639.34HNH endonuclease n=2 Tax=Archaea TaxID=2157 RepID=... [more]
UPI001F4E20958.860e-636.07HNH endonuclease n=1 Tax=Gordonia alkanivorans Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003615HNH nucleaseSMARTSM00507HNH_5coord: 1..55
e-value: 1.3E-4
score: 31.3
IPR002711HNH endonucleasePFAMPF01844HNHcoord: 13..60
e-value: 8.4E-8
score: 32.3
NoneNo IPR availableGENE3D3.30.40.60coord: 2..65
e-value: 3.2E-11
score: 44.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10801contigL-elsbetiae_contig10801:1549..1746 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10801.751.1mRNA_L-elsbetiae_contig10801.751.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10801 1549..1749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10801.751.1 ID=prot_L-elsbetiae_contig10801.751.1|Name=mRNA_L-elsbetiae_contig10801.751.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=66bp
MRESLFLEQEGQCAFCKTGLRTDPADFDCDHIIPVRCGGPTCMTNLHLLC
IRCHREKSARERSRPN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003615HNH_nuc
IPR002711HNH