mRNA_L-elsbetiae_contig10770.718.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10770.718.1 vs. uniprot
Match: D7FN41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN41_ECTSI) HSP 1 Score: 216 bits (549), Expect = 2.340e-66 Identity = 106/110 (96.36%), Postives = 108/110 (98.18%), Query Frame = 1 Query: 1 TAESRKEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRACNDIPVNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALQN 330 TAESRKEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRAC+DIPVNKKIFVRGLPWET DQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFK MDGAHAAL+N Sbjct: 114 TAESRKEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRACDDIPVNKKIFVRGLPWETNDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKSMDGAHAALEN 223
BLAST of mRNA_L-elsbetiae_contig10770.718.1 vs. uniprot
Match: A0A6H5KMW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW4_9PHAE) HSP 1 Score: 163 bits (413), Expect = 4.410e-47 Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 1 Query: 85 GSVNPGAFDEIHRACNDIPVNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALQN 330 GSVNPGAFDEIHRAC+DIPVNKKIFVRGLPWET DQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFK MDGAHAAL+N Sbjct: 42 GSVNPGAFDEIHRACDDIPVNKKIFVRGLPWETNDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKSMDGAHAALEN 123
BLAST of mRNA_L-elsbetiae_contig10770.718.1 vs. uniprot
Match: A0A0C9QX59_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_1845_1572 transcribed RNA sequence n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0C9QX59_9SPER) HSP 1 Score: 116 bits (291), Expect = 5.950e-29 Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 16 KEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRACNDIPVNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALQ 327 K++L+ L+PL EQL+ ++L+IGS+NP +EI + P ++K+FVRGL WET+ Q+L A FEQYGEI E V+MDK T KS+G+GFVTFK MD A AL+ Sbjct: 32 KDELQGLLEPLTKEQLISIMLNIGSLNPAIAEEIRDVASKDPAHRKLFVRGLAWETSSQTLCAAFEQYGEIEEGAVIMDKNTGKSRGFGFVTFKHMDSAQRALK 135
BLAST of mRNA_L-elsbetiae_contig10770.718.1 vs. uniprot
Match: A0A2K1L9M1_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L9M1_PHYPA) HSP 1 Score: 114 bits (285), Expect = 4.620e-28 Identity = 53/109 (48.62%), Postives = 79/109 (72.48%), Query Frame = 1 Query: 1 TAESRKEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRACNDIPVNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALQ 327 T + +++L++ L+PL+ +QL+ LL++ GS+ P D+I + PV++K+FVRGL WET+ +LR FEQYGE+ EA V+ DK T KS+G+GF+TFK MD AH AL+ Sbjct: 45 TVQLTRDELKSLLEPLNKDQLIALLIEAGSLFPAVADDIRDIASKDPVHRKLFVRGLAWETSSMALREAFEQYGEVEEACVITDKGTGKSRGFGFITFKHMDSAHRALK 153
BLAST of mRNA_L-elsbetiae_contig10770.718.1 vs. uniprot
Match: A0A2K1JG53_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JG53_PHYPA) HSP 1 Score: 113 bits (282), Expect = 1.240e-27 Identity = 56/109 (51.38%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 1 TAESRKEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRACNDIPVNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALQ 327 T + +E+L+ L+PL +QLV LL+D GS+ P D+I + + PV++K+FVRGL WET+ +LR FEQYGE+ EA V+ DK T KS+G+GFVTFK MD A AL+ Sbjct: 45 TVKLSREELKKLLEPLSKDQLVALLIDAGSLFPAVADDIRDSASKDPVHRKLFVRGLAWETSSVALREAFEQYGEVEEACVITDKGTGKSRGFGFVTFKHMDSAQRALK 153
BLAST of mRNA_L-elsbetiae_contig10770.718.1 vs. uniprot
Match: D8QPR6_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QPR6_SELML) HSP 1 Score: 110 bits (275), Expect = 9.030e-27 Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 16 KEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRACNDIPVNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALQ 327 K+ L+ L+PL EQLV LL+D GS P D+I + P ++K+FVRGL WETT Q+LR F+ YGEI E V+ DK T KS+G+GF+TFK MD A AL+ Sbjct: 27 KDDLKRLLEPLSKEQLVALLIDAGSQYPAVADDIRDVASKDPAHRKLFVRGLAWETTSQALRDAFQHYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALK 130
BLAST of mRNA_L-elsbetiae_contig10770.718.1 vs. uniprot
Match: A9NUP9_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NUP9_PICSI) HSP 1 Score: 108 bits (271), Expect = 3.750e-26 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 16 KEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRACNDIPVNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALQ 327 K+ L + L+PL EQL+ LL+D GS P +EI + P ++K+FVRGL WET+ Q+L FEQYGEI E V+MDK + KS+G+GFVTFK MD A AL+ Sbjct: 25 KDHLHSLLEPLSKEQLISLLVDAGSSYPAIAEEIKDVASKDPAHRKLFVRGLAWETSSQTLCDAFEQYGEIEEGAVIMDKASGKSRGFGFVTFKHMDSAQKALK 128
BLAST of mRNA_L-elsbetiae_contig10770.718.1 vs. uniprot
Match: D8RYI0_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RYI0_SELML) HSP 1 Score: 107 bits (268), Expect = 7.440e-26 Identity = 53/101 (52.48%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 25 LETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRACNDIPVNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALQ 327 L+ L+PL EQLV LL D GS D+I + P ++K+FVRGL WETT Q LR FEQ+GEI E V++DK T KS+G+GF+TFK MD A AL+ Sbjct: 39 LKRLLEPLSKEQLVALLTDAGSQYSAVADDIREVASKDPAHRKLFVRGLAWETTSQDLRDAFEQFGEIEEGAVIIDKATGKSRGFGFITFKHMDSAQRALK 139
BLAST of mRNA_L-elsbetiae_contig10770.718.1 vs. uniprot
Match: A0A2R6X2I3_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X2I3_MARPO) HSP 1 Score: 107 bits (267), Expect = 1.450e-25 Identity = 53/101 (52.48%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 25 LETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRACNDIPVNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALQ 327 L+ L+PL EQL+ LL D GS D+I + P ++K+FVRGL WETT Q+LR FEQYGEI E V+ DK T KS+G+GF+TFK MD A AL+ Sbjct: 40 LKKLLEPLSKEQLITLLADAGSQFSAVADDIRDVASKDPAHRKLFVRGLAWETTSQALRDAFEQYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALK 140
BLAST of mRNA_L-elsbetiae_contig10770.718.1 vs. uniprot
Match: A0A0C9S8C9_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_11558_1868 transcribed RNA sequence n=3 Tax=Araucariaceae TaxID=25664 RepID=A0A0C9S8C9_9SPER) HSP 1 Score: 107 bits (267), Expect = 3.480e-25 Identity = 51/107 (47.66%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 7 ESRKEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRACNDIPVNKKIFVRGLPWETTDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKGMDGAHAALQ 327 E KE+++ L+P + +QL+++L D + + I + + P ++KIFVRGL W+T+ ++L++VF QYGE+ E TV+MDK T KSKGYGFVTFK MDGA AL+ Sbjct: 51 EEDKEEVQKLLEPFNKDQLIEILRDAAMKDSHLMENIRKIADKDPAHRKIFVRGLGWDTSSEALKSVFSQYGELEECTVIMDKGTGKSKGYGFVTFKHMDGAKRALK 157 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10770.718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10770.718.1 >prot_L-elsbetiae_contig10770.718.1 ID=prot_L-elsbetiae_contig10770.718.1|Name=mRNA_L-elsbetiae_contig10770.718.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=110bp TAESRKEKLETWLKPLDNEQLVKLLLDIGSVNPGAFDEIHRACNDIPVNKback to top mRNA from alignment at L-elsbetiae_contig10770:574..2344- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10770.718.1 ID=mRNA_L-elsbetiae_contig10770.718.1|Name=mRNA_L-elsbetiae_contig10770.718.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1771bp|location=Sequence derived from alignment at L-elsbetiae_contig10770:574..2344- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10770:574..2344- >mRNA_L-elsbetiae_contig10770.718.1 ID=mRNA_L-elsbetiae_contig10770.718.1|Name=mRNA_L-elsbetiae_contig10770.718.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=660bp|location=Sequence derived from alignment at L-elsbetiae_contig10770:574..2344- (Laminarionema elsbetiae ELsaHSoW15)back to top |