mRNA_L-elsbetiae_contig10761.705.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10761.705.1
Unique NamemRNA_L-elsbetiae_contig10761.705.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10761.705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10761contigL-elsbetiae_contig10761:534..1250 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size717
Cds size717
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815293.5776932-CDS-L-elsbetiae_contig10761:533..12501622815293.5776932-CDS-L-elsbetiae_contig10761:533..1250Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10761 534..1250 +
1691682822.2923543-CDS-L-elsbetiae_contig10761:533..12501691682822.2923543-CDS-L-elsbetiae_contig10761:533..1250Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10761 534..1250 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10761.705.1prot_L-elsbetiae_contig10761.705.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10761 534..1250 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10761.705.1

>prot_L-elsbetiae_contig10761.705.1 ID=prot_L-elsbetiae_contig10761.705.1|Name=mRNA_L-elsbetiae_contig10761.705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
AAFTSAADGHGGGGGGLASSCGFGPGGGGGSSDAGSSSASGAVLAGMSSG
GEVPRFPVAPTAAATAAGAGAGTVFGSTGGAMAMQQHNSLRQNFTGAPPT
AVGSSNGNNGGGGHGLHYGGAVLQQQRQQQRQRQQQQQLQQQQKRQQQRQ
FLFQEQSQRQQTFDSGPPSFPPPTTPPGGDADHHASDTTVPSATAMQTDP
SELDVGGGSDKQGATAAASDDGGMITEAAPKYSVVGKRA
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mRNA from alignment at L-elsbetiae_contig10761:534..1250+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10761.705.1 ID=mRNA_L-elsbetiae_contig10761.705.1|Name=mRNA_L-elsbetiae_contig10761.705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=717bp|location=Sequence derived from alignment at L-elsbetiae_contig10761:534..1250+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGCTTTCACTTCTGCGGCCGATGGCCATGGTGGTGGCGGCGGCGGTCT
GGCGTCCTCCTGCGGGTTCGGTCCCGGCGGCGGCGGTGGCAGCAGTGATG
CCGGGTCTTCTTCTGCTAGCGGTGCTGTCCTGGCCGGGATGAGCTCCGGT
GGAGAAGTGCCCAGGTTCCCAGTGGCCCCTACCGCTGCCGCTACCGCTGC
CGGCGCTGGCGCCGGCACCGTGTTCGGCTCGACCGGCGGCGCGATGGCCA
TGCAGCAGCACAACAGCCTCCGGCAGAATTTCACGGGAGCACCGCCAACA
GCAGTGGGCTCCAGCAACGGCAACAACGGTGGCGGAGGCCACGGCCTTCA
TTACGGCGGCGCCGTGCTGCAGCAGCAGCGGCAGCAGCAGCGGCAGCGGC
AGCAGCAGCAGCAACTGCAGCAGCAGCAGAAGAGGCAGCAGCAGAGGCAG
TTCCTCTTCCAGGAGCAAAGCCAGCGCCAGCAAACCTTCGACAGCGGCCC
GCCGTCGTTCCCTCCGCCCACCACCCCTCCGGGGGGAGACGCGGATCATC
ACGCTTCAGACACGACCGTCCCCAGTGCCACCGCAATGCAAACCGATCCG
AGCGAGCTCGACGTGGGCGGCGGCTCGGACAAACAGGGAGCCACCGCGGC
CGCGTCCGACGACGGCGGGATGATCACAGAGGCCGCGCCGAAGTACTCCG
TGGTAGGCAAACGAGCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10761:534..1250+

>mRNA_L-elsbetiae_contig10761.705.1 ID=mRNA_L-elsbetiae_contig10761.705.1|Name=mRNA_L-elsbetiae_contig10761.705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1434bp|location=Sequence derived from alignment at L-elsbetiae_contig10761:534..1250+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGCTTTCACTTCTGCGGCCGATGGCCATGGTGGTGGCGGCGGCGGTCT
GGCGTCCTCCTGCGGGTTCGGTCCCGGCGGCGGCGGTGGCAGCAGTGATG
CCGGGTCTTCTTCTGCTAGCGGTGCTGTCCTGGCCGGGATGAGCTCCGGT
GGAGAAGTGCCCAGGTTCCCAGTGGCCCCTACCGCTGCCGCTACCGCTGC
CGGCGCTGGCGCCGGCACCGTGTTCGGCTCGACCGGCGGCGCGATGGCCA
TGCAGCAGCACAACAGCCTCCGGCAGAATTTCACGGGAGCACCGCCAACA
GCAGTGGGCTCCAGCAACGGCAACAACGGTGGCGGAGGCCACGGCCTTCA
TTACGGCGGCGCCGTGCTGCAGCAGCAGCGGCAGCAGCAGCGGCAGCGGC
AGCAGCAGCAGCAACTGCAGCAGCAGCAGAAGAGGCAGCAGCAGAGGCAG
TTCCTCTTCCAGGAGCAAAGCCAGCGCCAGCAAACCTTCGACAGCGGCCC
GCCGTCGTTCCCTCCGCCCACCACCCCTCCGGGGGGAGACGCGGATCATC
ACGCTTCAGACACGACCGTCCCCAGTGCCACCGCAATGCAAACCGATCCG
AGCGAGCTCGACGTGGGCGGCGGCTCGGACAAACAGGGAGCCACCGCGGC
CGCGTCCGACGACGGCGGGATGATCACAGAGGCCGCGCCGAAGTACTCCG
TGGTAGGCAAACGAGCGGCGGCTTTCACTTCTGCGGCCGATGGCCATGGT
GGTGGCGGCGGCGGTCTGGCGTCCTCCTGCGGGTTCGGTCCCGGCGGCGG
CGGTGGCAGCAGTGATGCCGGGTCTTCTTCTGCTAGCGGTGCTGTCCTGG
CCGGGATGAGCTCCGGTGGAGAAGTGCCCAGGTTCCCAGTGGCCCCTACC
GCTGCCGCTACCGCTGCCGGCGCTGGCGCCGGCACCGTGTTCGGCTCGAC
CGGCGGCGCGATGGCCATGCAGCAGCACAACAGCCTCCGGCAGAATTTCA
CGGGAGCACCGCCAACAGCAGTGGGCTCCAGCAACGGCAACAACGGTGGC
GGAGGCCACGGCCTTCATTACGGCGGCGCCGTGCTGCAGCAGCAGCGGCA
GCAGCAGCGGCAGCGGCAGCAGCAGCAGCAACTGCAGCAGCAGCAGAAGA
GGCAGCAGCAGAGGCAGTTCCTCTTCCAGGAGCAAAGCCAGCGCCAGCAA
ACCTTCGACAGCGGCCCGCCGTCGTTCCCTCCGCCCACCACCCCTCCGGG
GGGAGACGCGGATCATCACGCTTCAGACACGACCGTCCCCAGTGCCACCG
CAATGCAAACCGATCCGAGCGAGCTCGACGTGGGCGGCGGCTCGGACAAA
CAGGGAGCCACCGCGGCCGCGTCCGACGACGGCGGGATGATCACAGAGGC
CGCGCCGAAGTACTCCGTGGTAGGCAAACGAGCG
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