mRNA_L-elsbetiae_contig21262.6490.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21262.6490.1 vs. uniprot
Match: D8LRC0_ECTSI (W2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRC0_ECTSI) HSP 1 Score: 265 bits (678), Expect = 4.040e-84 Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 1 Query: 346 RYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEIVDMSHKLCTYIVNTA 732 RYKMPRVIGKVEGRGNGIKTVIFNV DLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKE+VDMSHKLCTYIVNTA Sbjct: 19 RYKMPRVIGKVEGRGNGIKTVIFNVMDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTA 147
BLAST of mRNA_L-elsbetiae_contig21262.6490.1 vs. uniprot
Match: B8BW00_THAPS (W2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW00_THAPS) HSP 1 Score: 201 bits (510), Expect = 5.240e-59 Identity = 91/126 (72.22%), Postives = 109/126 (86.51%), Query Frame = 1 Query: 346 RYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEIVDMSHKLCTYIV 723 RYKMP V GK+EG+GNGIKTVI N++D+ L+L RD GEV KFFG ELGAQT YN E +RA+VNGAHT+ LQQ+VHKY+ELFVLCPNCRLPE++YKIK+G I+HKC ACG K+ VDM+HKLCTYI+ Sbjct: 22 RYKMPTVYGKIEGKGNGIKTVIPNISDVGLSLHRDAGEVNKFFGCELGAQTTYNTETDRAVVNGAHTDQVLQQMVHKYIELFVLCPNCRLPETEYKIKSGMIYHKCAACGNKDAVDMTHKLCTYIL 147
BLAST of mRNA_L-elsbetiae_contig21262.6490.1 vs. uniprot
Match: A0A7S3DU57_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DU57_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.380e-58 Identity = 89/126 (70.63%), Postives = 107/126 (84.92%), Query Frame = 1 Query: 346 RYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEIVDMSHKLCTYIV 723 RYKMP V GK+EG GNGIKTV+ N+TD+ +L R PGEV KFFGTELGAQ+RY+ E +RAIVNGAHT+A LQ L++KYVE FVLCPNC LPE++YKIK+ I+HKC ACGAKE+VDMSH+LC YI+ Sbjct: 23 RYKMPAVYGKIEGSGNGIKTVVPNITDVGTSLHRAPGEVNKFFGTELGAQSRYSAETDRAIVNGAHTDAVLQDLINKYVEKFVLCPNCGLPETEYKIKSEVIYHKCAACGAKEMVDMSHRLCNYIL 148
BLAST of mRNA_L-elsbetiae_contig21262.6490.1 vs. uniprot
Match: B7G289_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G289_PHATC) HSP 1 Score: 199 bits (505), Expect = 3.650e-58 Identity = 91/126 (72.22%), Postives = 108/126 (85.71%), Query Frame = 1 Query: 346 RYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEIVDMSHKLCTYIV 723 RYKMP V GK+EG GNGIKTVI N+T+++L+L R PGEV KFFGTELGAQTRY+ E +RA+VNGAH +A LQ L+H+Y+E FVLCPNC LPE+ YKIKN AI+HKC ACGAKE+VDMSHKLC YI+ Sbjct: 23 RYKMPAVFGKIEGSGNGIKTVIPNITEVALSLHRQPGEVNKFFGTELGAQTRYSAETDRAVVNGAHMDAVLQDLMHRYIERFVLCPNCNLPETDYKIKNDAIWHKCAACGAKEMVDMSHKLCNYIL 148
BLAST of mRNA_L-elsbetiae_contig21262.6490.1 vs. uniprot
Match: A0A7S3V5E2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5E2_9STRA) HSP 1 Score: 198 bits (504), Expect = 4.430e-58 Identity = 90/126 (71.43%), Postives = 109/126 (86.51%), Query Frame = 1 Query: 346 RYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEIVDMSHKLCTYIV 723 RYKMP V+GK+EG+GNGIKTVI NV DL+L+L RDPGEV KFFG E+GAQT YNE D+RA+VNGAH++ LQ VHKYVE FVLCPNC LPE++YKIK G I+H+C ACG+K++VDM+HKLCTYI+ Sbjct: 19 RYKMPSVMGKIEGKGNGIKTVIVNVYDLALSLHRDPGEVNKFFGCEMGAQTTYNETDDRAVVNGAHSDGELQGCVHKYVEKFVLCPNCGLPETEYKIKQGCIWHRCKACGSKDMVDMNHKLCTYIL 144
BLAST of mRNA_L-elsbetiae_contig21262.6490.1 vs. uniprot
Match: A0A7S1D9Q5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q5_CYCTE) HSP 1 Score: 198 bits (504), Expect = 4.660e-58 Identity = 89/126 (70.63%), Postives = 109/126 (86.51%), Query Frame = 1 Query: 346 RYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEIVDMSHKLCTYIV 723 RYKMP V GK+EGRGNGIKTVI N++D+ L+L R+ GEV KFFGTELGAQT YN + +RA+VNGAHT+ TLQ L+H+Y+E FVLCPNC LPE++YKIKN I+HKC ACG+K++VDMSHKLCTYI+ Sbjct: 23 RYKMPAVYGKIEGRGNGIKTVIPNISDVGLSLHREAGEVTKFFGTELGAQTTYNPDTDRAVVNGAHTDDTLQDLMHRYIEKFVLCPNCSLPETEYKIKNDCIYHKCAACGSKDMVDMSHKLCTYIL 148
BLAST of mRNA_L-elsbetiae_contig21262.6490.1 vs. uniprot
Match: A0A7S2KDW7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KDW7_9STRA) HSP 1 Score: 197 bits (501), Expect = 8.530e-58 Identity = 91/126 (72.22%), Postives = 108/126 (85.71%), Query Frame = 1 Query: 346 RYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEIVDMSHKLCTYIV 723 RYKMP+V+GK+EGRGNG KTVI N+++L+L+L RDPGEV KFFGTELGAQT Y++E RA+VNG HT+A LQQ VHKYVE FV+CPNC LPE+ YKIK+G I HKC ACGAKE+VDMSHKL YI+ Sbjct: 21 RYKMPKVVGKLEGRGNGSKTVIVNISELALSLHRDPGEVNKFFGTELGAQTTYSDETNRAVVNGHHTDAVLQQAVHKYVEAFVICPNCGLPETDYKIKSGVITHKCAACGAKEMVDMSHKLTNYIL 146
BLAST of mRNA_L-elsbetiae_contig21262.6490.1 vs. uniprot
Match: A0A1Z5JLW0_FISSO (Translation initiation factor 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLW0_FISSO) HSP 1 Score: 196 bits (499), Expect = 2.020e-57 Identity = 88/128 (68.75%), Postives = 110/128 (85.94%), Query Frame = 1 Query: 340 ACRYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEIVDMSHKLCTYIV 723 A RYKMP V GK+EG GNGIKTV+ NV D++ +L R+PGEV KFFGTE+GAQ+RY+ + +RAIVNGAHT+ATLQ+L+H+Y+E FVLCP CRLPE+KYKIK+ I+H C ACGAK++VDMSHKLC YI+ Sbjct: 21 AYRYKMPAVFGKIEGSGNGIKTVLVNVLDVANSLHREPGEVSKFFGTEMGAQSRYSADTDRAIVNGAHTDATLQELMHRYIEKFVLCPTCRLPETKYKIKSDTIYHSCAACGAKDMVDMSHKLCNYIL 148
BLAST of mRNA_L-elsbetiae_contig21262.6490.1 vs. uniprot
Match: A0A6T5QBS0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QBS0_HETAK) HSP 1 Score: 195 bits (495), Expect = 1.100e-56 Identity = 89/128 (69.53%), Postives = 110/128 (85.94%), Query Frame = 1 Query: 340 ACRYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEIVDMSHKLCTYIV 723 A RYKMP++IGKVEGRGNGIKT I N+T+L+ +L RDPGEVCKFFG ELGAQT++ EE+E+A+VNGAH++ LQQ+V +Y + FVLCPNCRLPE+ YKIK+ I+HKC ACGAKE+VDM HKL TYI+ Sbjct: 16 AYRYKMPKIIGKVEGRGNGIKTRIVNITELATSLHRDPGEVCKFFGCELGAQTKWVEEEEKALVNGAHSDNDLQQMVFRYCQAFVLCPNCRLPETDYKIKSETIWHKCMACGAKEMVDMQHKLTTYIL 143
BLAST of mRNA_L-elsbetiae_contig21262.6490.1 vs. uniprot
Match: A0A7S3LEE8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEE8_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.470e-56 Identity = 87/126 (69.05%), Postives = 107/126 (84.92%), Query Frame = 1 Query: 346 RYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEIVDMSHKLCTYIV 723 RYKMP V GK+EG GNGIKTVI N+TD+ +L R P EV KFFGTELGAQTRY+ E +RAI+NGAHT+ATLQ+L+ +Y++ FVLCPNC LPE++YKIK+ +FHKC ACGAKE+VDMSHKLC +I+ Sbjct: 23 RYKMPAVFGKIEGSGNGIKTVIPNITDVGTSLHRSPAEVNKFFGTELGAQTRYSAETDRAIINGAHTDATLQELIKRYIDKFVLCPNCNLPETEYKIKSDTVFHKCMACGAKEMVDMSHKLCNFIL 148 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21262.6490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21262.6490.1 >prot_L-elsbetiae_contig21262.6490.1 ID=prot_L-elsbetiae_contig21262.6490.1|Name=mRNA_L-elsbetiae_contig21262.6490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp MQVQDASRDREGGGPRQRHQDGDIQRHRPVPRPQARPRRGVQVLRDGARRback to top mRNA from alignment at L-elsbetiae_contig21262:360..2329+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21262.6490.1 ID=mRNA_L-elsbetiae_contig21262.6490.1|Name=mRNA_L-elsbetiae_contig21262.6490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1970bp|location=Sequence derived from alignment at L-elsbetiae_contig21262:360..2329+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21262:360..2329+ >mRNA_L-elsbetiae_contig21262.6490.1 ID=mRNA_L-elsbetiae_contig21262.6490.1|Name=mRNA_L-elsbetiae_contig21262.6490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig21262:360..2329+ (Laminarionema elsbetiae ELsaHSoW15)back to top |