prot_L-elsbetiae_contig2112.6431.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2112.6431.1
Unique Nameprot_L-elsbetiae_contig2112.6431.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length92
Homology
BLAST of mRNA_L-elsbetiae_contig2112.6431.1 vs. uniprot
Match: A0A6H5JG92_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG92_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 4.720e-19
Identity = 47/83 (56.63%), Postives = 56/83 (67.47%), Query Frame = 0
Query:    5 RCTLEGARQLLAEGRVHCVVGP-SAAVHGASAPAXXXXXXXXXXXXXXXDAGTLTGTLEWAAQCMAHGRLLLPSAETCPWFPV 86
            RCT + A QLL EGRV+CV+G  S AV  ++A +               +AGTLTG+LEWA QCMAHGRLLLPSA TCPWFP+
Sbjct:  947 RCTHDAALQLLQEGRVYCVIGSESTAVRYSAARSEIQKAAV--------EAGTLTGSLEWALQCMAHGRLLLPSAATCPWFPL 1021          
BLAST of mRNA_L-elsbetiae_contig2112.6431.1 vs. uniprot
Match: D7FH86_ECTSI (BRCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH86_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.050e-17
Identity = 45/82 (54.88%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    6 CTLEGARQLLAEGRVHCVVGP-SAAVHGASAPAXXXXXXXXXXXXXXXDAGTLTGTLEWAAQCMAHGRLLLPSAETCPWFPV 86
            CT + A QLL EGRV+CV+G  S AV  ++A +               +AGTL G+LEWA QCMAHGRLLLPSA TCPWFP+
Sbjct:  771 CTHDAALQLLQEGRVYCVIGSESTAVRVSTARSAIEKAAV--------EAGTLAGSLEWALQCMAHGRLLLPSAATCPWFPL 844          
BLAST of mRNA_L-elsbetiae_contig2112.6431.1 vs. uniprot
Match: D7FW83_ECTSI (BRCT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW83_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 6.940e-17
Identity = 42/83 (50.60%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    5 RCTLEGARQLLAEGRVHCVVGPSAAVHGASAPAXXXXXXXXXXXXXXXDAGTLTGTLEWAAQCMAHGRLLLPSAETCPWFPVG 87
            +CTLEGA +L+ +G+V CV+GP +A  G SA A                 GT  G+LEWA QC+ HGRLLLP+A TCPWFP+G
Sbjct: 1484 QCTLEGALKLVKDGQVFCVIGPKSA-DGGSASASTAAVEEAAEVM-----GTPAGSLEWATQCIIHGRLLLPNAGTCPWFPLG 1560          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2112.6431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JG92_9PHAE4.720e-1956.63BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FH86_ECTSI1.050e-1754.88BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FW83_ECTSI6.940e-1750.60BRCT domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2112contigL-elsbetiae_contig2112:7131..7406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2112.6431.1mRNA_L-elsbetiae_contig2112.6431.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2112 7131..7407 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2112.6431.1 ID=prot_L-elsbetiae_contig2112.6431.1|Name=mRNA_L-elsbetiae_contig2112.6431.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
KGDHRCTLEGARQLLAEGRVHCVVGPSAAVHGASAPAAAAAAAASAVMKA
AVDAGTLTGTLEWAAQCMAHGRLLLPSAETCPWFPVGVAAAG
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