mRNA_L-elsbetiae_contig211.6405.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig211.6405.1 vs. uniprot
Match: B5LWK4_9PHYC (Putative transcription regulator n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWK4_9PHYC) HSP 1 Score: 434 bits (1117), Expect = 3.230e-146 Identity = 238/472 (50.42%), Postives = 323/472 (68.43%), Query Frame = 1 Query: 13 YLCDAVNEWQRKRIQMLQDNNVPYADMAWKVEG--VVLPDCKQVYTCSSFMTTLFQTTMTSGGGRETVDLVGIGEPFKDCRKVVFYPLEEKTHVLNMIRVFCHTGLIVFSRGESILRTIERYAAFHYYGIEEGKHVLKRLILNNLTPSNAIMAFEYAVHRHEKDLLADIHTYISNYAFLVFRQKSFLNLKRESMANLVDLCKNDSLNILEIDLLRNLYRLCDKKIGDKEYAGFKSAFDILKHK-FGSDAQSLWDIVRLTSISMEEFMLFVQKNPCAMTNDDIVNTMQTIYSGSISSTTSTPNRKRKKFQMVSSYPRNLNFRAAQNPQADVSHWERGKVQAFFIFDFGKKETVALPPIAYGDRRVSCTVTPSEKTIGLSGQ-ITHQTSMTEYVQFSASIVNFRHDRWKKTSVSVKLSNSNTNPYNFNIANILSCNAIEGSSGNSTGYVFDVNKYPDYCESGTWLMMSFSIEGV 1416 YLC+AV+ WQR RI L+++ + Y DM WK++ L DC+ YTCSSFM TLF+TT VG GE +D +V Y L EK+H+ MIRVFCHTGL+ F + ++ILRTIERYAAF +YGIE G LKRL+L++L PSN+++AFEYAVHR ++ LL DI YI NYAFLVFRQKSFL ++RES+A LV LC +DSLN+ EIDLL +L RLC+KK+ +KE+ F S F IL H+ +G+ +SL+D +RL+S+SMEEFM K+P AM ND IV M+ I+ SS +KRKKFQ+VS+YPRNL F ++PQ +VS+ +R KV A ++F F K+ V+LP + +G ++ TV +K +G+SGQ I+ + ++ +AS+VNFRHDRWKK++ ++ S F I NILSCNAIEGSSG Y+FDV +YPD+ + G+ LM+S + E + Sbjct: 9 YLCEAVDGWQRNRIVELENDALQYTDMVWKLDDGETYLRDCRSAYTCSSFMRTLFETT------------VGKGEKSRD--EVPMYRLSEKSHIFAMIRVFCHTGLVRFGKSDTILRTIERYAAFQFYGIEIGSATLKRLVLDSLGPSNSMVAFEYAVHRQDRGLLQDIVAYIRNYAFLVFRQKSFLGIRRESLAELVHLCDSDSLNVPEIDLLSHLIRLCEKKLDEKEFTEFDSPFAILTHREWGTSGKSLFDALRLSSLSMEEFMSLALKHPGAMNNDQIVQVMRAIHRPEGSS------KKRKKFQIVSAYPRNLTFHPVESPQMEVSYCQRDKVLAHYVFQFLPKKDVSLPTLNFGSYQIRITVVYRDKVLGISGQAISPKQESRADLRITASMVNFRHDRWKKSTTALSGSV-------FQIPNILSCNAIEGSSG----YLFDVAEYPDFSDGGSCLMLSLACESL 449
BLAST of mRNA_L-elsbetiae_contig211.6405.1 vs. uniprot
Match: Q6XM46_9PHYC (FirrV-1-A41 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM46_9PHYC) HSP 1 Score: 407 bits (1046), Expect = 6.230e-135 Identity = 234/498 (46.99%), Postives = 311/498 (62.45%), Query Frame = 1 Query: 10 GYLCDAVNEWQRKRIQMLQDNNVPYADMAWKVEGV--VLPDCKQVYTCSSFMTTLFQTTMTSGGGRETVDLVGIGEPFKDCRKVVFYPLEEKTHVLNMIRVFCHTGLIVFSRGESILRTIERYAAFHYYGIEEGKHVLKRLILNNLTPSNAIMAFEYAVHRHEKDLLADIHTYISNYAFLVFRQKSFLNLKRESMANLVDLCKNDSLNILEIDLLRNLYRLCDKKIGDKEYAGFKSAFDILKHKFGSDAQSLWDIVRLTSISMEEFMLFVQKNPCAMTNDDIVNTMQTIYSGSISSTTSTPNRKRKKFQMVSSYPRNLNFRAAQ-NPQADVSHWERGKVQAFFIFDF--GK-KETVALPPIAYGDRRVSCTVTPSEKTIGLSGQITHQTSMTEY---------------VQFSASIVNFRHDRWKKTSVSVKLSNSNTNPYNFNIANILSCNAIEGSSGNSTGYVFDVNKYPDYCES-GTWLMMSFSIEGVDESTQND 1437 +LC AV EWQ+ RI+ L DN + Y DMAWK+ G + DC+ Y CS+F+T FQT++ G + D G P Y L EK + +MIR+FCHTGL+ F + +SIL T+ERYAAF +YGIE G LKR +L +LTPSN+++AFEYAVHRH+ LLA+I Y+S+YAF+VFRQKSFL + +ES LV LC +D+LN+ EIDL L+RLC+KK +K +A F SAF I+ H +SL+D +RL SI+MEE M FV K+P A+ ND IV M+ I+ KRKKFQ VSSYPR LNF A NPQ DVSH + GK+ A F+F F G+ K VALPPIA+G +V + +++TIG++GQI H T T ++ I+NFRH+RWKK+SV + +SN+ +F I NILSCNAIE S G TGY+FDV YP+Y E L++S E + + ++ Sbjct: 5 SFLCGAVEEWQQHRIRDLLDNTLQYPDMAWKLNGEDDSIRDCRVFYECSTFLTNYFQTSV--GTAKTNAD----GLPL--------YTLSEKPAIFSMIRIFCHTGLMCFDKTDSILTTMERYAAFQFYGIEMGSATLKRHVLESLTPSNSVLAFEYAVHRHDDSLLAEIKAYMSHYAFIVFRQKSFLGIGKESFHQLVSLCDSDNLNMKEIDLFSCLFRLCEKKNSEKGFAEFDSAFSIMTHTRSQGEKSLYDTLRLHSITMEEVMSFVHKHPAALNNDQIVQIMREIHQPG-------DRPKRKKFQAVSSYPRYLNFNAVVGNPQVDVSHRQTGKMMAHFVFPFTPGRTKSDVALPPIAFGAYQVHANMVYTDRTIGITGQI-HATEGTGINSSSXXXXXXXXNTKIRVVCYIINFRHERWKKSSVCLDVSNTLYQYLDFRIPNILSCNAIERSCGTPTGYLFDVTCYPEYSEQDAASLLLSMECEEIHQDAASE 480
BLAST of mRNA_L-elsbetiae_contig211.6405.1 vs. uniprot
Match: Q8QNM4_ESV1K (EsV-1-40 n=2 Tax=root TaxID=1 RepID=Q8QNM4_ESV1K) HSP 1 Score: 336 bits (862), Expect = 2.920e-107 Identity = 186/495 (37.58%), Postives = 292/495 (58.99%), Query Frame = 1 Query: 16 LCDAVNEWQRKRIQMLQDNNVPYADMAWKVEGVVLPDCKQVYTC-SSFMTTLFQTTMTSGGGRETVDLVGIGEPFKDCRKVVFYPLEEKTHVLNMIRVFCHTGLIVFSRGESILRTIERYAAFHYYGIEEGKHVLKRLILNNLTPSNAIMAFEYAVHR----------HEKDLLADIHTYISNYAFLVFRQKSFLNLKRESMANLVDLCKNDSLNILEIDLLRNLYRLCDKKIG-DKEYAGFKSAFDILKHKFGSDAQSLWDIVRLTSISMEEFMLFVQKNPCAMTNDDIVNTMQTIYSGSISSTTSTP---------------NRKRKKFQMVSSYPRNLNFRAAQNPQADVSHWERGKVQAFFIFDFGKKETVALPPIAYGDRRVSCTVTPSEKTIGLSGQITHQTSMTE---YVQFSASIVNFRHDRWKKTSVSVKLSNSNTNPYNFNIANILSCNAIEGSSGNSTGYVFDVNKYPDYCESGTWLMMSFSIE 1410 L V+ WQ + I+ LQ NN + DMAW +GV DCKQ+Y+ S + LF ++M G T + G+ V +P+ K H+ +M+RVFCHTG++ +GE IL+T+ERY+AFHYY ++ G +V+++L+++ + P+NAI A EYA+ LL+DI YIS YAF+VF+ KSF L+ +S+ + +C D LNI EIDLL+ +Y+LC+KK+ D + G SA+ ++ SLW +RL+SISM EF+ F+++N ++D+ + + +YS + ++ TP ++KRK FQ +S YPRNL F +PQ D+S+W+ K++ F FDF KE + LPP+ + + CTV +++++ +SG I +T+ ++ + +AS+VNFRHDRW+K +V LS+ F I ILS N I ++ ++ GY+FD+ +YP+Y GTW++MS IE Sbjct: 9 LLGYVSRWQLETIEALQANNADFFDMAWLFDGVYYRDCKQLYSSRSDYFKCLFSSSMRKG----TEEFEGV------TAYSVSHPMS-KRHIFDMMRVFCHTGMVQVDKGEPILKTMERYSAFHYYSLQGGMNVIRQLVMDVINPTNAIQALEYAMSSAVCSGDGDGDSNAGLLSDIQDYISIYAFVVFKHKSFYALRADSIPGVSQICARDDLNIKEIDLLQCVYKLCEKKVSADNKPGGLGSAWALMTDDAAERGSSLWSKIRLSSISMREFVKFIKENKQCFSSDNALKIITFLYSCADAAAADTPPSSASANDEVVGVHLSKKRKTFQPISFYPRNLEFHGLASPQTDISYWDDSKIKLFVAFDFSSKEAMTLPPVHFHSVFIHCTVYHADRSLNVSGNIHGKTNKSDPSVNITVTASVVNFRHDRWRKKNVLASLSSGTA----FKIPTILSSNTI--ANNDTHGYLFDIERYPEYSPKGTWILMSLCIE 486
BLAST of mRNA_L-elsbetiae_contig211.6405.1 vs. uniprot
Match: A0A6H5KJD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD3_9PHAE) HSP 1 Score: 159 bits (403), Expect = 6.740e-39 Identity = 90/237 (37.97%), Postives = 140/237 (59.07%), Query Frame = 1 Query: 52 IQMLQDNNVPYADMAWKVEGVVLPDCKQVYTCSSFMTTLFQTTMTSGGGR-ETVDLVGIGEPFKDCRKVVFYPLEEKTHVLNMIRVFCHTGLIVFSRGESILRTIERYAAFHYYGIEEGKHVLKRLILNNLTPSNAIMAFEYAVHR--------HEKDLLADIHTYISNYAFLVFRQKSFLNLKRESMANLVDLCKNDSLNILEIDLLRNLYRLCDKKI-GDKEYAGFKSAFDILKH 732 I+ L+ NN DMAW +GV DC+ + S + LF M G + E V + +P K H+ +M+RVFC+TG++ +GE IL+T+ERY+AFHYY + G V+++L+++ + PSNAI A EYA++ ++ LL+DI YI+ YA +VF+ KSF L ES+ + +C D LNI EIDLL+ +++LC+K+I DK+ G +SA++++ H Sbjct: 418 IETLKCNNSDSFDMAWMFQGVFYNDCRHS-SRSDYFKCLFLNDMRKGTEKFEGVKANKVSDPIS------------KRHIFDMMRVFCYTGIVQVDKGEPILKTMERYSAFHYYSLRGGMDVIRQLVMDVINPSNAIQALEYAMNSVVCSGEDGSDRGLLSDISDYIAIYALVVFKHKSFYALGFESIPGISQICARDDLNIREIDLLQCVFKLCEKRIHADKDGHGLRSAWELILH 641
BLAST of mRNA_L-elsbetiae_contig211.6405.1 vs. uniprot
Match: A0A836CH79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH79_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.720e-25 Identity = 117/488 (23.98%), Postives = 208/488 (42.62%), Query Frame = 1 Query: 34 EWQRKRIQMLQDNNV--PYADMAWKV-EGVVLPDCKQVYTCSSFMTTLFQTTMTSGGGRETVDLVGIGEPFKDCRKVVFYPLEEKTHVLNMIRVFCHTGLIVFSRGESILRTIERYAAFHYYGIEEGKHVLKRLILNNLTPSNAIMAFEYAVHRHEKD--LLADIHTYISNYAFLVFRQKSFLNLKRESMANLVDLCKNDSLNILEIDLLRNLYRLCDKKIGDKEYAGFKSAFDILKHKFGSDAQSLWDIVRLTSISMEEFMLFVQKNPCAMTNDDIVNTMQTIYSGSISSTTSTPNRKR------------KKFQMVSSYPRNLNFRAAQNPQADVSHWERGKVQAFFI-FDFGKKETVALPPIAYGDRRVSCTVTPSEKTIGLSG----QITHQTSMTEYVQFSASIVNFRHDRWKKTSVSVKLSNSNTNPYNFNIANILSCNAIEGSSGNSTGYVFDVNKYPDYCESGTWLMMSFSIEGVDESTQ 1431 EW + ++ L+D+ Y DM W++ +G ++PD + VY F + S G E V KV Y + + +MIRV+CHTG I++ + ES ++RY H+Y I K + ++LI++ L +A+ FE + D LL ++ Y+ + F + + + ++ ++ ++ + NI E L+ LY +C K S + G S W VR+ +S+E+ + F + P A + ++ ++ I SGS + P + +K + +S YPRNL + WE + + + + V LPP G + T + + ++G ++ + S + + +VNFRH RW K SV V+ N + F + +++ NA+E GY FD KYPD+ G ++M + D + Sbjct: 11 EWSKNTLKCLEDHASMREYCDMFWELNDGTLVPDVRGVYM-------RFSEPLASSTGTERVV------------KVSGYMAAPE--LFHMIRVYCHTGQIMYGKAESPRALLKRYECVHFYNIPCSKRLFQKLIVDRLDVYSAMQLFEILATKDYNDDALLKEVCMYVKMH-FGEAGKTALHQVSGIALPHICNMMSQEDANISEGKLMGQLYAVCSK-------VNSSSPTQLFVSPQGDRTNSPWQCVRILGLSVEDILSFRKNWPNAFQDTFYMSLIEVIKSGSAA-----PEQMHQLGLSEQSFLSPRKMRPISCYPRNLPIGTGTTVH---TMWEDENLSITYASIAYQRGLHVELPPFTSGGAVLQLTAHFQGEHLNIAGGMNMNLSREASQCQQRTLTLYLVNFRHGRWNKRSVVVE-----GNLF-FRVDKLITLNALENE-----GYRFDSTKYPDFAP-GNMILMKVVVATSDTQVE 449 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig211.6405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig211.6405.1 >prot_L-elsbetiae_contig211.6405.1 ID=prot_L-elsbetiae_contig211.6405.1|Name=mRNA_L-elsbetiae_contig211.6405.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=480bp MEVGYLCDAVNEWQRKRIQMLQDNNVPYADMAWKVEGVVLPDCKQVYTCSback to top mRNA from alignment at L-elsbetiae_contig211:15250..16689- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig211.6405.1 ID=mRNA_L-elsbetiae_contig211.6405.1|Name=mRNA_L-elsbetiae_contig211.6405.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1440bp|location=Sequence derived from alignment at L-elsbetiae_contig211:15250..16689- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig211:15250..16689- >mRNA_L-elsbetiae_contig211.6405.1 ID=mRNA_L-elsbetiae_contig211.6405.1|Name=mRNA_L-elsbetiae_contig211.6405.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2880bp|location=Sequence derived from alignment at L-elsbetiae_contig211:15250..16689- (Laminarionema elsbetiae ELsaHSoW15)back to top |