prot_L-elsbetiae_contig211.6399.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig211.6399.1
Unique Nameprot_L-elsbetiae_contig211.6399.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length197
Homology
BLAST of mRNA_L-elsbetiae_contig211.6399.1 vs. uniprot
Match: Q6XM50_9PHYC (FirrV-1-A37 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM50_9PHYC)

HSP 1 Score: 151 bits (382), Expect = 4.590e-43
Identity = 87/188 (46.28%), Postives = 119/188 (63.30%), Query Frame = 0
Query:    1 MSAYNADSIRDAFGKMDDLQFRMIKDDHDEEKNLIPKSNEREKPCCLLESWLKKCSLRSHAHSSASVMCRRMFNFISIPKILCGGFAVALSFWATSDVNGTSHEVRVAVAILSATSTFLDSLVRLLRFSEKEFEHRMASGMYSQLCRKIEVNVFSPSPETSMKNINSLLAEVSVQFSNIITFSPHITI 188
            MS Y+  ++ +   KM +L    I+DD    +    + N  ++   LL++WL KCS+R+  H+  S+    +   +SIPK+  GG A ALSFWATSD+NG+SH VRV VA LSA ST L SL + LR+ E  F H+MASGMYSQLCRKIE+ VFS   + S    N  +AE++ +F+NI TFSP I +
Sbjct:   13 MSVYDTSAMDETLKKMGEL----IQDD----EYADVEQNNNKRSLMLLKTWLTKCSIRARTHAKLSMRAGVLDVMLSIPKLFFGGAATALSFWATSDINGSSHGVRVLVATLSAVSTILASLGQFLRYDEARFRHQMASGMYSQLCRKIEMLVFS---DFSDSTGNRDVAEIAARFANIATFSPQIQV 189          
BLAST of mRNA_L-elsbetiae_contig211.6399.1 vs. uniprot
Match: B5LWK1_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWK1_9PHYC)

HSP 1 Score: 150 bits (380), Expect = 4.750e-43
Identity = 76/142 (53.52%), Postives = 101/142 (71.13%), Query Frame = 0
Query:   47 LLESWLKKCSLRSHAHSSASVMCRRMFNFISIPKILCGGFAVALSFWATSDVNGTSHEVRVAVAILSATSTFLDSLVRLLRFSEKEFEHRMASGMYSQLCRKIEVNVFSPSPETSMKNINSLLAEVSVQFSNIITFSPHITI 188
            L+ESWLKKCS R+H HS  S+        +S+PK+  GG A ALSFWATSD+NG+SH VRV VA+LSA ST L SL + LR+ E ++ H+MA+GMY+QLCR+IE++ FS   E      +++LAE++  FSN+ TFSP I I
Sbjct:   29 LMESWLKKCSARAHEHSRESLRSGFANRMLSVPKLFFGGAATALSFWATSDLNGSSHRVRVLVAVLSAISTVLASLSQFLRYDESQYRHQMAAGMYTQLCRRIELSFFS---EDEGGVNDAVLAEIAAGFSNVATFSPQINI 167          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig211.6399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q6XM50_9PHYC4.590e-4346.28FirrV-1-A37 n=1 Tax=Feldmannia irregularis virus a... [more]
B5LWK1_9PHYC4.750e-4353.52Uncharacterized protein n=1 Tax=Feldmannia species... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..71
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..126
NoneNo IPR availableTMHMMTMhelixcoord: 73..95
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig211contigL-elsbetiae_contig211:5767..6357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig211.6399.1mRNA_L-elsbetiae_contig211.6399.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig211 5767..6357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig211.6399.1 ID=prot_L-elsbetiae_contig211.6399.1|Name=mRNA_L-elsbetiae_contig211.6399.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp
MSAYNADSIRDAFGKMDDLQFRMIKDDHDEEKNLIPKSNEREKPCCLLES
WLKKCSLRSHAHSSASVMCRRMFNFISIPKILCGGFAVALSFWATSDVNG
TSHEVRVAVAILSATSTFLDSLVRLLRFSEKEFEHRMASGMYSQLCRKIE
VNVFSPSPETSMKNINSLLAEVSVQFSNIITFSPHITIKSTSRNNK*
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