mRNA_L-elsbetiae_contig21073.6389.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21073.6389.1 vs. uniprot
Match: D7G5Y1_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y1_ECTSI) HSP 1 Score: 238 bits (608), Expect = 1.430e-70 Identity = 133/176 (75.57%), Postives = 145/176 (82.39%), Query Frame = 1 Query: 7 SRALFRAKNVVRAVHSVTRRRLRPGEAVFRQGEPGLSLFTVDKGELDVIKEHAGVRHTVARLSPGGFFGEMALMTSQPRSASVVCAXXXXXXXXXXXXVVEEISGDDFARLLMARRTGFRRDVIRMLRARQFRHVVYKLLTELGSEASFSDQARRGGVFVRVATTKSGTLTLPELK 534 SRALFRAKNVVRAVHSVT+R L PGEAVFRQG+ G SLFTV++GEL+V+KEH+GV TVARLSPG FGEMALMT+QPRSASVVCA VEEISGDDFARLLMARRTGFRRDV+RMLRARQFRH VYKLLTELGSEA+FSD+ R VF R T KSGTL+L ELK Sbjct: 694 SRALFRAKNVVRAVHSVTKRLLGPGEAVFRQGDRGSSLFTVEEGELNVVKEHSGVHRTVARLSPGSLFGEMALMTAQPRSASVVCAAEGGC-------AVEEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATFSDEELRQ-VFDRADTAKSGTLSLDELK 861
BLAST of mRNA_L-elsbetiae_contig21073.6389.1 vs. uniprot
Match: A0A6H5JE67_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE67_9PHAE) HSP 1 Score: 234 bits (596), Expect = 3.600e-68 Identity = 130/176 (73.86%), Postives = 144/176 (81.82%), Query Frame = 1 Query: 7 SRALFRAKNVVRAVHSVTRRRLRPGEAVFRQGEPGLSLFTVDKGELDVIKEHAGVRHTVARLSPGGFFGEMALMTSQPRSASVVCAXXXXXXXXXXXXVVEEISGDDFARLLMARRTGFRRDVIRMLRARQFRHVVYKLLTELGSEASFSDQARRGGVFVRVATTKSGTLTLPELK 534 SRALFRAKNVVRAVHSVT+R L PGEAVFRQG+ G SLFTV++GEL+V+KEH+GV TVARL PG FGEMALMT+QPRSASVVCA V+EISGDDFARLLMARRTGFRRDV+RMLRARQFRH VYKLLTELGSEA+F+D+ R VF R T KSGTL+L ELK Sbjct: 926 SRALFRAKNVVRAVHSVTKRLLGPGEAVFRQGDRGSSLFTVEEGELNVVKEHSGVHRTVARLPPGSLFGEMALMTAQPRSASVVCAAEGGC-------AVDEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATFTDEELRQ-VFDRADTAKSGTLSLGELK 1093
BLAST of mRNA_L-elsbetiae_contig21073.6389.1 vs. uniprot
Match: A0A836CF38_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF38_9STRA) HSP 1 Score: 131 bits (330), Expect = 2.880e-32 Identity = 82/183 (44.81%), Postives = 113/183 (61.75%), Query Frame = 1 Query: 7 SRALFRAKNVVRAVHSVTRRRLRPGEAVFRQGEPGLSLFTVDKGELDVIKEHAGVR-HTVARLSPGGFFGEMALMTSQPRSASVVCAXXXXXXXXXXXXVVEEISGDDFARLLMARRTGFRRDVIRMLRARQFRHVVYKLLT-------ELGSEASFSDQARRGGVFVRVATTKSGTLTLPEL 531 SR + R K ++RA+++V R ++R GE V RQGE G S++T+ G LDVIKE + TVA L PG +FGEMA++ QPR+A+V C+ V++E+SG +F +LLM+R + FRRDV +++RARQFRH VYKLL L S +FS + R VF V SG + L EL Sbjct: 528 SRQMVRTKALLRALNTVRRLKVRGGEVVVRQGEVGKSMYTIVDGNLDVIKESPPLAPRTVAVLKPGSYFGEMAVLLKQPRNATVACSRGCEWC------VIDEVSGAEFLKLLMSRPSSFRRDVQQLMRARQFRHGVYKLLAAQEVAVPSLDSRTTFSTEELRA-VFDAVDVDDSGEIELSEL 703
BLAST of mRNA_L-elsbetiae_contig21073.6389.1 vs. uniprot
Match: D8LCM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM7_ECTSI) HSP 1 Score: 102 bits (255), Expect = 4.710e-24 Identity = 51/65 (78.46%), Postives = 58/65 (89.23%), Query Frame = 1 Query: 7 SRALFRAKNVVRAVHSVTRRRLRPGEAVFRQGEPGLSLFTVDKGELDVIKEHAGVRHTVARLSPG 201 SRALFRAKNVVRAVHSVT+R L PGEAVFRQG+ G SLFTV++GEL+V+KEH+GV TV RLSPG Sbjct: 58 SRALFRAKNVVRAVHSVTKRLLGPGEAVFRQGDRGSSLFTVEEGELNVVKEHSGVHRTVVRLSPG 122
BLAST of mRNA_L-elsbetiae_contig21073.6389.1 vs. uniprot
Match: D7FSY6_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY6_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 1.080e-18 Identity = 75/191 (39.27%), Postives = 102/191 (53.40%), Query Frame = 1 Query: 10 RALFRAKNVVRAVHSVTRRRLRPGEAVFRQGEPGLSLFTVDKGELDVIKE--------HAGVRH--TVARLSPGGFFGEMALMTSQPRSASVVCAXXXXXXXXXXXX-------VVEEISGDDFARLLMARRTGFRRDVIRMLRARQFRHVVYKLLTELGSEASFSDQARRGGVFVRVATTKSGTLTLPEL 531 R + RAK ++RAV S+T+RRL G AV +QG+ G S++TV +G+LDV + AG + VA LS G FGEMALM QPRSA+VVC+ VV EI G+DF R+L + F + + ++R R FR + LLT G+E ++ R F V T KSG L E+ Sbjct: 456 RDISRAKTLLRAVGSITQRRLPAGSAVVQQGDLGDSMYTVVEGKLDVRAKGREGEGNGRAGHPYGDKVASLSAGDVFGEMALMLKQPRSATVVCSSPTLPGEGGGTDRVPGGFCVVNEIKGEDFVRMLK-QSDSFLKSMKVIMRTRLFRRAML-LLTAAGTETLSKEKMR--AAFEMVDTDKSGYLDANEV 642
BLAST of mRNA_L-elsbetiae_contig21073.6389.1 vs. uniprot
Match: A0A661M7S1_9DELT (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661M7S1_9DELT) HSP 1 Score: 70.5 bits (171), Expect = 1.020e-11 Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 67 RLRPGEAVFRQGEPGLSLFTVDKGELDVIKEHAGVRHTVARLSPGGFFGEMALMTSQPRSAS 252 RL+ G VFRQG+PG S++ + G++ V+KE G + V L PG FFGEMA++T QPRSA+ Sbjct: 13 RLKEGTTVFRQGDPGGSMYVIRAGKVRVLKESHGRKRVVTTLGPGDFFGEMAVVTGQPRSAT 74
BLAST of mRNA_L-elsbetiae_contig21073.6389.1 vs. uniprot
Match: A0A2U1VB55_9PROT (Small-conductance mechanosensitive channel n=1 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VB55_9PROT) HSP 1 Score: 71.6 bits (174), Expect = 2.170e-11 Identity = 37/82 (45.12%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 13 ALFRAKNVVRAVHSVTRRRLRPGEAVFRQGEPGLSLFTVDKGELDVIKEHAGVRHTVARLSPGGFFGEMALMTSQPRSASVV 258 A F + ++ +RR+ G A RQGEPG SLF + +G DV + V + RLSPG FGEM+L+T QPRSASV+ Sbjct: 316 AAFDEAEIAELALALRKRRIPAGTAAVRQGEPGQSLFVIAEGVFDVQLDQGAVPVRLNRLSPGDLFGEMSLLTGQPRSASVI 397
BLAST of mRNA_L-elsbetiae_contig21073.6389.1 vs. uniprot
Match: A0A537QG91_9PROT (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QG91_9PROT) HSP 1 Score: 67.8 bits (164), Expect = 2.310e-11 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 55 VTRRRLRPGEAVFRQGEPGLSLFTVDKGELDVIKEHAGVRHTVARLSPGGFFGEMALMTSQPRSASVV 258 +TRR+ PGE + R+GE G LF + +GE++V +E VARL PG FFGE+ALM+ PR+A+V+ Sbjct: 31 MTRRQYMPGEIIIREGEVGEELFLISEGEVEVDREG----REVARLGPGDFFGELALMSGNPRNANVI 94
BLAST of mRNA_L-elsbetiae_contig21073.6389.1 vs. uniprot
Match: A0A0S8C1R4_9DELT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Myxococcales bacterium SG8_38 TaxID=1703407 RepID=A0A0S8C1R4_9DELT) HSP 1 Score: 68.9 bits (167), Expect = 3.820e-11 Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 70 LRPGEAVFRQGEPGLSLFTVDKGELDVIKEHAGVRHTVARLSPGGFFGEMALMTSQPRSASV 255 L G VFRQG+PG S++ + G++ V+KE G R V+ L PG FFGEMA +T +PRSA+V Sbjct: 14 LSAGTTVFRQGDPGGSIYVIRAGQVRVVKESHGRRRIVSTLGPGDFFGEMAAVTGRPRSATV 75
BLAST of mRNA_L-elsbetiae_contig21073.6389.1 vs. uniprot
Match: A0A661MMS9_9DELT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661MMS9_9DELT) HSP 1 Score: 68.6 bits (166), Expect = 5.320e-11 Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 67 RLRPGEAVFRQGEPGLSLFTVDKGELDVIKEHAGVRHTVARLSPGGFFGEMALMTSQPRSAS 252 RL G VFRQG+PG S++ + G++ V+KE G + V L PG FFGEMA++T QPRSA+ Sbjct: 13 RLSGGTTVFRQGDPGGSMYVIRAGKVRVLKESHGRQRVVTTLGPGDFFGEMAVVTGQPRSAT 74 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21073.6389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21073.6389.1 >prot_L-elsbetiae_contig21073.6389.1 ID=prot_L-elsbetiae_contig21073.6389.1|Name=mRNA_L-elsbetiae_contig21073.6389.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp APSRALFRAKNVVRAVHSVTRRRLRPGEAVFRQGEPGLSLFTVDKGELDVback to top mRNA from alignment at L-elsbetiae_contig21073:211..2372+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21073.6389.1 ID=mRNA_L-elsbetiae_contig21073.6389.1|Name=mRNA_L-elsbetiae_contig21073.6389.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2162bp|location=Sequence derived from alignment at L-elsbetiae_contig21073:211..2372+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21073:211..2372+ >mRNA_L-elsbetiae_contig21073.6389.1 ID=mRNA_L-elsbetiae_contig21073.6389.1|Name=mRNA_L-elsbetiae_contig21073.6389.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1068bp|location=Sequence derived from alignment at L-elsbetiae_contig21073:211..2372+ (Laminarionema elsbetiae ELsaHSoW15)back to top |