prot_L-elsbetiae_contig20933.6334.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20933.6334.1
Unique Nameprot_L-elsbetiae_contig20933.6334.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length54
Homology
BLAST of mRNA_L-elsbetiae_contig20933.6334.1 vs. uniprot
Match: A0A6G0JS79_9STRA (V-type proton ATPase proteolipid subunit (Fragment) n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0JS79_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 4.140e-20
Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MAIGVVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTC 52
            MAIGVVGDAGVRA+GQQEKLFV MILILIFAEALGLYGLIVALILSQ    C
Sbjct:   62 MAIGVVGDAGVRAVGQQEKLFVNMILILIFAEALGLYGLIVALILSQKKSDC 113          
BLAST of mRNA_L-elsbetiae_contig20933.6334.1 vs. uniprot
Match: A0A7S2WSL7_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WSL7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 7.170e-20
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 0
Query:    2 AIGVVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTC 52
            AIG+VGD GVRA+G+QEKLFVGMILILIFAEALGLYGLIVALILSQ+ +TC
Sbjct:  123 AIGIVGDTGVRAVGRQEKLFVGMILILIFAEALGLYGLIVALILSQSGFTC 173          
BLAST of mRNA_L-elsbetiae_contig20933.6334.1 vs. uniprot
Match: A0A6V1NP00_HETAK (V-type proton ATPase proteolipid subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NP00_HETAK)

HSP 1 Score: 84.3 bits (207), Expect = 2.800e-19
Identity = 45/49 (91.84%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    5 VVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTCD 53
            VVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQN   C 
Sbjct:  116 VVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNVVECS 164          
BLAST of mRNA_L-elsbetiae_contig20933.6334.1 vs. uniprot
Match: A0A6A3GCT7_9STRA (ATP-synt_C domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GCT7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.670e-19
Identity = 45/52 (86.54%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MAIGVVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTC 52
            MAIGVVGDAGVRA+ QQEKLFV M LILIFAEALGLYGLIVALILSQ T  C
Sbjct:   52 MAIGVVGDAGVRAVNQQEKLFVKMTLILIFAEALGLYGLIVALILSQKTSDC 103          
BLAST of mRNA_L-elsbetiae_contig20933.6334.1 vs. uniprot
Match: A0A6G0RDJ1_9STRA (ATP-synt_C domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RDJ1_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.780e-19
Identity = 44/52 (84.62%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 MAIGVVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTC 52
            MAIGVVGDAGVRA+GQ EKLFV MILILIF EALGLYGLIVALILSQ    C
Sbjct:    1 MAIGVVGDAGVRAVGQHEKLFVNMILILIFTEALGLYGLIVALILSQKKSDC 52          
BLAST of mRNA_L-elsbetiae_contig20933.6334.1 vs. uniprot
Match: A0A7S0GWL4_9EUKA (V-type proton ATPase proteolipid subunit n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GWL4_9EUKA)

HSP 1 Score: 84.0 bits (206), Expect = 4.350e-19
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    1 MAIGVVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTC 52
            MAIG+VGDAGVRA  QQEKLFVGMILILIFAEALGLYGLIVALILSQ++  C
Sbjct:  112 MAIGIVGDAGVRANAQQEKLFVGMILILIFAEALGLYGLIVALILSQSSENC 163          
BLAST of mRNA_L-elsbetiae_contig20933.6334.1 vs. uniprot
Match: A0A6A3PKY2_9STRA (ATP-synt_C domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3PKY2_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 7.890e-19
Identity = 43/52 (82.69%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    1 MAIGVVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTC 52
            M IGVVGDAGVRA+GQ EKLFV MILILIFAEALGLYGLIV LILSQ    C
Sbjct:    1 MTIGVVGDAGVRAVGQHEKLFVNMILILIFAEALGLYGLIVGLILSQKKSDC 52          
BLAST of mRNA_L-elsbetiae_contig20933.6334.1 vs. uniprot
Match: A0A6A4AY99_9STRA (V-type proton ATPase proteolipid subunit (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4AY99_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.480e-18
Identity = 45/52 (86.54%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MAIGVVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTC 52
            MAIGVVGDAGVRA+ QQEKLFV M LILIFAEALGLYGLIVALILSQ T  C
Sbjct:  107 MAIGVVGDAGVRAVSQQEKLFVKMTLILIFAEALGLYGLIVALILSQKTSDC 158          
BLAST of mRNA_L-elsbetiae_contig20933.6334.1 vs. uniprot
Match: A0A6A3X4R3_9STRA (V-type proton ATPase proteolipid subunit n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3X4R3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.830e-18
Identity = 44/52 (84.62%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 MAIGVVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTC 52
            MAIGVVGDAGVRA+GQ EKLFV MILILIF EALGLYGLIVALILSQ    C
Sbjct:   87 MAIGVVGDAGVRAVGQHEKLFVNMILILIFTEALGLYGLIVALILSQKKSDC 138          
BLAST of mRNA_L-elsbetiae_contig20933.6334.1 vs. uniprot
Match: A0A835YJ26_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ26_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.460e-18
Identity = 41/49 (83.67%), Postives = 46/49 (93.88%), Query Frame = 0
Query:    5 VVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTYTCD 53
            +VGDAGVRA+GQQE+LFVGMILILIFAEAL LYGLIVALILSQ +Y+C 
Sbjct:  119 IVGDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSCS 167          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20933.6334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0JS79_9STRA4.140e-2088.46V-type proton ATPase proteolipid subunit (Fragment... [more]
A0A7S2WSL7_9STRA7.170e-2086.27V-type proton ATPase proteolipid subunit n=1 Tax=E... [more]
A0A6V1NP00_HETAK2.800e-1991.84V-type proton ATPase proteolipid subunit n=1 Tax=H... [more]
A0A6A3GCT7_9STRA3.670e-1986.54ATP-synt_C domain-containing protein n=2 Tax=Phyto... [more]
A0A6G0RDJ1_9STRA3.780e-1984.62ATP-synt_C domain-containing protein n=1 Tax=Phyto... [more]
A0A7S0GWL4_9EUKA4.350e-1986.54V-type proton ATPase proteolipid subunit n=1 Tax=A... [more]
A0A6A3PKY2_9STRA7.890e-1982.69ATP-synt_C domain-containing protein n=3 Tax=Phyto... [more]
A0A6A4AY99_9STRA1.480e-1886.54V-type proton ATPase proteolipid subunit (Fragment... [more]
A0A6A3X4R3_9STRA1.830e-1884.62V-type proton ATPase proteolipid subunit n=2 Tax=P... [more]
A0A835YJ26_9STRA2.460e-1883.67V-type proton ATPase proteolipid subunit n=1 Tax=T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.610coord: 1..51
e-value: 1.9E-17
score: 65.2
NoneNo IPR availablePANTHERPTHR10263:SF5V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNITcoord: 1..49
NoneNo IPR availablePANTHERPTHR10263V-TYPE PROTON ATPASE PROTEOLIPID SUBUNITcoord: 1..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..45
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR002379V-ATPase proteolipid subunit C-like domainPFAMPF00137ATP-synt_Ccoord: 2..45
e-value: 2.4E-16
score: 59.8
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 2..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20933contigL-elsbetiae_contig20933:2115..2276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20933.6334.1mRNA_L-elsbetiae_contig20933.6334.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20933 2115..2294 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20933.6334.1 ID=prot_L-elsbetiae_contig20933.6334.1|Name=mRNA_L-elsbetiae_contig20933.6334.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=54bp
MAIGVVGDAGVRAIGQQEKLFVGMILILIFAEALGLYGLIVALILSQNTY
TCD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002379ATPase_proteolipid_c-like_dom
IPR035921F/V-ATP_Csub_sf