prot_L-elsbetiae_contig20725.6250.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20725.6250.1
Unique Nameprot_L-elsbetiae_contig20725.6250.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length257
Homology
BLAST of mRNA_L-elsbetiae_contig20725.6250.1 vs. uniprot
Match: A0A6H5JWT3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT3_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 7.120e-37
Identity = 71/125 (56.80%), Postives = 91/125 (72.80%), Query Frame = 0
Query:   18 GSALVARITKPHMSALVCYSEQNMPRPAGSQHWYADSGSSATITNDCHLMYNVRRLPPNDQYIQIGDANLISVVAVGTIDLKFHQLGTNGKQEDFSVSV-EAHYVPGCGFNLFSVWKVSHKHEVI 141
            G  +VAR+T+          + +MP P  S+ W ADSG+SA ITN    MYNVR L P++++IQIGD+ LI V AVG++DL+FHQ+G +GKQED  V+V E  +VPGCGFNLFSVWKVSHKHEV+
Sbjct:  407 GKVVVARLTRRPTVEKAFLCQPSMPNPICSEQWQADSGASAMITNKVDAMYNVRHLGPDERFIQIGDSALIKVAAVGSLDLRFHQIGADGKQEDLDVTVPEVLFVPGCGFNLFSVWKVSHKHEVM 531          
BLAST of mRNA_L-elsbetiae_contig20725.6250.1 vs. uniprot
Match: A0A6H5K0P8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P8_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 5.160e-36
Identity = 70/128 (54.69%), Postives = 91/128 (71.09%), Query Frame = 0
Query:   18 GSALVARITKPHMSALVCYSEQNMPRPAGSQHWYADSGSSATITNDCHLMYNVRRLPPNDQYIQIGDANLISVVAVGTIDLKFHQLGTNGKQEDFSVSV-EAHYVPGCGFNLFSVWKVSHKHEVIINP 144
            G  +VAR+T+          + +MP P GS+ W ADSG+SA I+N    MYNVR   P++++I+IGD+ LI V AVG++DL+FHQ+G +GKQED   +V E  +VPGCGFNLFSVWKVSHKHEV  NP
Sbjct:   74 GKVVVARLTRRPTVEKAFLCQPSMPNPIGSEQWQADSGASAMISNKVDAMYNVRHSGPDERFIRIGDSALIKVAAVGSLDLRFHQVGADGKQEDLDGTVPEVLFVPGCGFNLFSVWKVSHKHEVRTNP 201          
BLAST of mRNA_L-elsbetiae_contig20725.6250.1 vs. uniprot
Match: A0A6H5JXD4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXD4_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 7.000e-34
Identity = 71/133 (53.38%), Postives = 92/133 (69.17%), Query Frame = 0
Query:   18 GSALVARITKPHMSALVCYSEQNMPRPAGSQHWYADSGSSATITNDCHLMYNVRRLPPNDQYIQIGDANLISVVAVGTIDLKFHQLGTNGKQE--DFSVSVEAHYVPGCGFNLFSVWKVSHKHEVIINPQGTH 148
            G  +VAR+T+          + +MP P GS+ W ADSG+SA ITN    MYNVR   P++++IQIGD+ LI V AVG++DL+FHQ+G +GKQE  DF+V  E  +VPGCG NLFSV KVSHK+EV INP   +
Sbjct:  702 GKVVVARLTRRPTVEKAFLCQPSMPNPIGSEQWQADSGASAMITNKVDAMYNVRHSGPDERFIQIGDSALIKVAAVGSLDLRFHQIGADGKQEGLDFTVP-EILFVPGCGLNLFSVSKVSHKYEVRINPNAAY 833          
BLAST of mRNA_L-elsbetiae_contig20725.6250.1 vs. uniprot
Match: A0A6H5KQJ6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQJ6_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 3.490e-33
Identity = 66/108 (61.11%), Postives = 82/108 (75.93%), Query Frame = 0
Query:   42 PRPAGSQHWYADSGSSATITNDCHLMYNVRRLPPNDQYIQIGDANLISVVAVGTIDLKFHQLGTNGKQEDFSVSV-EAHYVPGCGFNLFSVWKVSHKHEVIINPQGTH 148
            P P  ++   ADSG+SA I+N    MYNVR L P++Q+IQIGD+ LI V AVG++DL+FHQ+G +GKQED  V+V E  +VPGCGFNLFSVWKVSHKHEV INP   +
Sbjct:  334 PYPPENRGRQADSGASAMISNKVDAMYNVRHLGPDEQFIQIGDSALIKVAAVGSLDLRFHQIGADGKQEDLDVTVPEVLFVPGCGFNLFSVWKVSHKHEVRINPNAEY 441          
BLAST of mRNA_L-elsbetiae_contig20725.6250.1 vs. uniprot
Match: A0A6H5KZJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ6_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.220e-31
Identity = 63/98 (64.29%), Postives = 77/98 (78.57%), Query Frame = 0
Query:   52 ADSGSSATITNDCHLMYNVRRLPPNDQYIQIGDANLISVVAVGTIDLKFHQLGTNGKQEDFSVSV-EAHYVPGCGFNLFSVWKVSHKHEVIINPQGTH 148
            ADSG+SA ITN    MYNVR L P++++IQIGD+ LI V AVG++DL+FHQ+G +GKQED  V+V E  +VPGC FNLFSVWKVSHKHEV INP   +
Sbjct:  460 ADSGASAMITNKVDAMYNVRHLGPDERFIQIGDSALIKVAAVGSLDLRFHQIGADGKQEDLDVTVPEVLFVPGCSFNLFSVWKVSHKHEVRINPNAEY 557          
BLAST of mRNA_L-elsbetiae_contig20725.6250.1 vs. uniprot
Match: A0A6H5JMH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH6_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.560e-31
Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 0
Query:   52 ADSGSSATITNDCHLMYNVRRLPPNDQYIQIGDANLISVVAVGTIDLKFHQLGTNGKQEDFSVSV-EAHYVPGCGFNLFSVWKVSHKHEVIINP 144
            ADSG+SA ITN    MYNVR L P++++IQIGD+ LI V AVG++DL+FHQ+G +GKQED  V+V E  +VPGCGFNLFSVWKVSHKH V INP
Sbjct:  320 ADSGASAMITNKVDAMYNVRHLGPDERFIQIGDSALIKVAAVGSLDLRFHQIGADGKQEDLDVTVPEVLFVPGCGFNLFSVWKVSHKHAVRINP 413          
BLAST of mRNA_L-elsbetiae_contig20725.6250.1 vs. uniprot
Match: A0A6H5K592_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K592_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 3.680e-30
Identity = 61/98 (62.24%), Postives = 76/98 (77.55%), Query Frame = 0
Query:   52 ADSGSSATITNDCHLMYNVRRLPPNDQYIQIGDANLISVVAVGTIDLKFHQLGTNGKQEDFSVSV-EAHYVPGCGFNLFSVWKVSHKHEVIINPQGTH 148
            ADSG+SA I+N    MYNVR L P++++IQIGD+ LI V AVG++DL+FHQ+G +GKQED  V+V E  +VP CGFNLFSVW VSHKHEV INP   +
Sbjct:  359 ADSGASAMISNKMDAMYNVRHLGPDERFIQIGDSALIKVAAVGSVDLRFHQIGADGKQEDLDVTVPEILFVPRCGFNLFSVWNVSHKHEVRINPDAEY 456          
BLAST of mRNA_L-elsbetiae_contig20725.6250.1 vs. uniprot
Match: A0A6H5KH18_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH18_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 6.680e-29
Identity = 58/94 (61.70%), Postives = 74/94 (78.72%), Query Frame = 0
Query:   52 ADSGSSATITNDCHLMYNVRRLPPNDQYIQIGDANLISVVAVGTIDLKFHQLGTNGKQEDFSVSV-EAHYVPGCGFNLFSVWKVSHKHEVIINP 144
            ADSG++A ITN    MYNVR L P+++++QIGD+  I + AVG++DL FHQ+G +GKQED  V+V E  +VPGCGFNLFSVWKV HKH+V INP
Sbjct:  302 ADSGANAMITNKVDAMYNVRHLGPDERFVQIGDSAPIKIAAVGSLDLGFHQIGADGKQEDLDVTVPEVLFVPGCGFNLFSVWKVFHKHKVRINP 395          
BLAST of mRNA_L-elsbetiae_contig20725.6250.1 vs. uniprot
Match: A0A6H5JY94_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY94_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 8.710e-28
Identity = 59/97 (60.82%), Postives = 73/97 (75.26%), Query Frame = 0
Query:   52 ADSGSSATITNDCHLMYNVRRLPPNDQYIQIGDANLISVVAVGTIDLKFHQLGTNGKQEDFSVSV-EAHYVPGCGFNLFSVWKVSHKHEVIINPQGT 147
            ADSG+SA I+N    +YNVR L P++Q+IQIGD   I V AVG++DL+FHQ+G +GKQED   +V E  +V GCGFNLFSVWKVSHKHE +I   GT
Sbjct:  671 ADSGASAMISNKVDAIYNVRHLGPDEQFIQIGDLAFIKVAAVGSLDLRFHQIGADGKQEDLDYTVPEFLFVLGCGFNLFSVWKVSHKHEHVITLTGT 767          
BLAST of mRNA_L-elsbetiae_contig20725.6250.1 vs. uniprot
Match: A0A6H5LPH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPH8_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 6.040e-24
Identity = 47/73 (64.38%), Postives = 59/73 (80.82%), Query Frame = 0
Query:   67 MYNVRRLPPNDQYIQIGDANLISVVAVGTIDLKFHQLGTNGKQEDFSVSV-EAHYVPGCGFNLFSVWKVSHKH 138
            MYNVR L P++++IQIGD+ LI V AVG++DL+FHQ+G + KQED  V+V E  +V GCG NLFSVWKVSHKH
Sbjct:    1 MYNVRHLGPDERFIQIGDSALIKVAAVGSVDLRFHQIGADVKQEDLDVTVPEVLFVRGCGLNLFSVWKVSHKH 73          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20725.6250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5JWT3_9PHAE7.120e-3756.80Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K0P8_9PHAE5.160e-3654.69Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JXD4_9PHAE7.000e-3453.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQJ6_9PHAE3.490e-3361.11Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZJ6_9PHAE1.220e-3164.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMH6_9PHAE1.560e-3167.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K592_9PHAE3.680e-3062.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KH18_9PHAE6.680e-2961.70Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JY94_9PHAE8.710e-2860.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5LPH8_9PHAE6.040e-2464.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20725contigL-elsbetiae_contig20725:556..1326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20725.6250.1mRNA_L-elsbetiae_contig20725.6250.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20725 556..1326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20725.6250.1 ID=prot_L-elsbetiae_contig20725.6250.1|Name=mRNA_L-elsbetiae_contig20725.6250.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp
MSEPTRVYELPCVRVPHGSALVARITKPHMSALVCYSEQNMPRPAGSQHW
YADSGSSATITNDCHLMYNVRRLPPNDQYIQIGDANLISVVAVGTIDLKF
HQLGTNGKQEDFSVSVEAHYVPGCGFNLFSVWKVSHKHEVIINPQGTHLL
NRRLRFIRGSSNDSLYATRISRLPKVHIGREDALVASQTNKWPGPQITPT
ECALAGTLLESMERLRPAGLGMKNELDLLLGNTTAIDVLLESSVCIPPRV
SVEHAEQ
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