prot_L-elsbetiae_contig2057.6200.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2057.6200.1
Unique Nameprot_L-elsbetiae_contig2057.6200.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length290
Homology
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BLAST of mRNA_L-elsbetiae_contig2057.6200.1 vs. uniprot
Match: D8LFH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH0_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 5.710e-94
Identity = 185/251 (73.71%), Postives = 205/251 (81.67%), Query Frame = 0 
Query:   40 SPPLMMLDDPPLGEGWDENGNDLSKAANDAVRQAYCGTWMAKLRQEAAAIRAGDHPSVMRRSKLTMKASKQRMDMTERNAKRQRDIAAKLYQNEVERINEAHDTAIEQTRERLLAEANEEIRRSKNQMEGCKEDMNRMNTRHTRGNAKEGSVQDFWSASITGSKTNGS-KRPLYAISIVLDDDVLSEDIDLLRYSDRESSNRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGAENGRTRRAPGWRRDE 289
            S P  +L+DPPLGEGWDE+GNDLSKAAND VR+ +C  W+AKLRQEAAAIRAGDHP+VMRRSKLTM ASK+R +MTER+AKRQR IAA LYQ EV+RI+ A++TAIEQTRERLL EANEEIRRSKN MEG KED+NRMNTRHTRGNAK   V D W  S T SKTNG+ KRPL AIS+VL+DD LSEDID LRYSDR+    GGXXXXXXXXXXXXXXXXXXXX           +ENGR RR PGWRRDE
Sbjct:   69 SSPSSVLEDPPLGEGWDEHGNDLSKAANDDVRKVHCEAWIAKLRQEAAAIRAGDHPAVMRRSKLTMNASKRRAEMTERSAKRQRKIAATLYQQEVDRIHAAYETAIEQTRERLLTEANEEIRRSKNVMEGFKEDVNRMNTRHTRGNAKGNIVDDPWLTSSTASKTNGNGKRPLCAISLVLEDDALSEDIDFLRYSDRD----GGXXXXXXXXXXXXXXXXXXXXSGYTSY-----SENGRARRPPGWRRDE 310
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BLAST of mRNA_L-elsbetiae_contig2057.6200.1 vs. uniprot
Match: A0A6H5KFI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI1_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 5.510e-37
Identity = 134/252 (53.17%), Postives = 142/252 (56.35%), Query Frame = 0 
Query:   40 SPPLMMLDDPPLGEGWDENGNDLSKAANDAVRQAYCGTWMAKLRQEAAAIRAGDHPSVMRRSKLTMKASKQRMDMTERNAKRQRDIAAKLYQNEVERINEAHDTAIEQTRERLLAEANEEIRRSKNQMEGCKEDMNRMNTRHTRGNAKEGSVQDFWSASITGSKTNGS-KRPLYAISIVLDDDVLSEDIDLLRYSDRESSNRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGG-AENGRTRRAPGWRRDE 289
            S P  +L+DPPLGEGWDE+GNDLSKAAND                                                                               TRERLL EANEEIRRSKN MEG KED+NRMNTRHTRGNAK   V D W  S T SK NG+ KRPL AIS+VL+DD LSEDID LRYSDRE   RGGXXXXXXXXXXXXXXXXXXXXXXXXXX      +ENGR RR PGWRRDE
Sbjct:  363 SSPSSVLEDPPLGEGWDEHGNDLSKAAND-------------------------------------------------------------------------------TRERLLTEANEEIRRSKNLMEGFKEDVNRMNTRHTRGNAKGNIVDDPWLTSSTSSKANGNGKRPLCAISLVLEDDALSEDIDFLRYSDRE---RGGXXXXXXXXXXXXXXXXXXXXXXXXXXSGYTSYSENGRARRPPGWRRDE 532
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2057.6200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFH0_ECTSI5.710e-9473.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFI1_9PHAE5.510e-3753.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..180
IPR013907Sds3-likePFAMPF08598Sds3coord: 77..186
e-value: 7.2E-6
score: 26.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2057contigL-elsbetiae_contig2057:3519..7553 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2057.6200.1mRNA_L-elsbetiae_contig2057.6200.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2057 2402..7571 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2057.6200.1 ID=prot_L-elsbetiae_contig2057.6200.1|Name=mRNA_L-elsbetiae_contig2057.6200.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=290bp
MDMDMDDGEAATTVGEAGSPQEESRSEAAARARAAQHLSSPPLMMLDDPP
LGEGWDENGNDLSKAANDAVRQAYCGTWMAKLRQEAAAIRAGDHPSVMRR
SKLTMKASKQRMDMTERNAKRQRDIAAKLYQNEVERINEAHDTAIEQTRE
RLLAEANEEIRRSKNQMEGCKEDMNRMNTRHTRGNAKEGSVQDFWSASIT
GSKTNGSKRPLYAISIVLDDDVLSEDIDLLRYSDRESSNRGGGGGGGGGG
SGGGAGAGAAGAGAGSGYAYGGGAENGRTRRAPGWRRDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013907Sds3