mRNA_L-elsbetiae_contig20524.6188.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig20524.6188.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 119 bits (298), Expect = 1.420e-29 Identity = 54/77 (70.13%), Postives = 67/77 (87.01%), Query Frame = 1 Query: 4 GQYAFPSLKYVAQQTFGNQIAAAPVERDFSGFGVFMRPNRSRVDTYWAEMVMFIKANYSHIPKYADIPSIDPKDIRK 234 G+++FP+LK+VAQQTFG+Q +AAPVERDFSG G+F+ PNRSRV+ YW EMVMF+ AN+ IPKY +IPSID KDIRK Sbjct: 740 GRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRK 816
BLAST of mRNA_L-elsbetiae_contig20524.6188.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 117 bits (293), Expect = 3.360e-29 Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 1 Query: 4 GQYAFPSLKYVAQQTFGNQIAAAPVERDFSGFGVFMRPNRSRVDTYWAEMVMFIKANYSHIPKYADIPSIDPKDIRK 234 G++AFPSLK+VAQQTFGNQ +AAPVERDFSG G+FM PNRSRVD YW EMVMF+KAN++ + +IP IDPKDIRK Sbjct: 398 GKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNS-SRRINIPQIDPKDIRK 473
BLAST of mRNA_L-elsbetiae_contig20524.6188.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 107 bits (267), Expect = 2.010e-25 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 4 GQYAFPSLKYVAQQTFGNQIAAAPVERDFSGFGVFMRPNRSRVDTYWAEMVMFIKANYSHIPKYADIPSIDPKDIRK 234 G+ FPSLKYVAQQTFG+Q +AA +ERDFS G+F NRSR + YW EMVM +K NY IP Y DIPSID KDIRK Sbjct: 500 GKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRK 576
BLAST of mRNA_L-elsbetiae_contig20524.6188.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 2.050e-23 Identity = 46/75 (61.33%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 4 GQYAFPSLKYVAQQTFGNQIAAAPVERDFSGFGVFMRPNRSRVDTYWAEMVMFIKANYSHIPKYADIPSIDPKDI 228 G+ FP L VAQQ FGNQ AA VERDFSG + NRSR+DTYW EMVMF+ AN+ HIP + DIP I KDI Sbjct: 38 GRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDI 112
BLAST of mRNA_L-elsbetiae_contig20524.6188.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 5.920e-23 Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = 1 Query: 4 GQYAFPSLKYVAQQTFGNQIAAAPVERDFSGFGVFMRPNRSRVDTYWAEMVMFIKANYSHIPKYADIPSIDPKDIR 231 G+ FP L VAQQ FGNQ A + VERDFSG G+ + PNRSR+DTYW E+VMF+ AN++HIP IP + K+IR Sbjct: 200 GKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIR 275
BLAST of mRNA_L-elsbetiae_contig20524.6188.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.120e-21 Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 4 GQYAFPSLKYVAQQTFGNQIAAAPVERDFSGFGVFMRPNRSRVDTYWAEMVMFIKANYSHIPKYADIPSIDPKDIRK 234 G++AFP+L YVAQQ FG+Q AA +ERDFS G+ NR+R+D YW EMV+F+KAN+ IP Y DIP++D K IR+ Sbjct: 395 GRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRE 471
BLAST of mRNA_L-elsbetiae_contig20524.6188.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 2.640e-21 Identity = 43/72 (59.72%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 16 FPSLKYVAQQTFGNQIAAAPVERDFSGFGVFMRPNRSRVDTYWAEMVMFIKANYSHIPKYADIPSIDPKDIR 231 FP L VAQQ GNQ AA VERDFS + NRSR+DTYW EMVMF+ NY IP + DIP I KDIR Sbjct: 2 FPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 73
BLAST of mRNA_L-elsbetiae_contig20524.6188.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 1.080e-20 Identity = 44/76 (57.89%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 4 GQYAFPSLKYVAQQTFGNQIAAAPVERDFSGFGVFMRPNRSRVDTYWAEMVMFIKANYSHIPKYADIPSIDPKDIR 231 G+ FP L VAQQ GNQ AA VERDFS + NRSR+DTYW EMVMF+ NY IP + DIP I KDIR Sbjct: 113 GRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 188
BLAST of mRNA_L-elsbetiae_contig20524.6188.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 1.390e-19 Identity = 44/76 (57.89%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 4 GQYAFPSLKYVAQQTFGNQIAAAPVERDFSGFGVFMRPNRSRVDTYWAEMVMFIKANYSHIPKYADIPSIDPKDIR 231 G+ FP L VAQQ GNQ AA VERDFS + NRSR+DTYW EMVMF+ NY IP + DIP I KDIR Sbjct: 511 GRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 586
BLAST of mRNA_L-elsbetiae_contig20524.6188.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 2.180e-16 Identity = 39/72 (54.17%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 16 FPSLKYVAQQTFGNQIAAAPVERDFSGFGVFMRPNRSRVDTYWAEMVMFIKANYSHIPKYADIPSIDPKDIR 231 F +L A + GNQ AA VERDFS + NRSR+DTYW EMVMF+ NY IP + DIP I KDIR Sbjct: 218 FQALYMTAGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIR 289 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20524.6188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig20524.6188.1 >prot_L-elsbetiae_contig20524.6188.1 ID=prot_L-elsbetiae_contig20524.6188.1|Name=mRNA_L-elsbetiae_contig20524.6188.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp KGQYAFPSLKYVAQQTFGNQIAAAPVERDFSGFGVFMRPNRSRVDTYWAEback to top mRNA from alignment at L-elsbetiae_contig20524:1697..1930- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig20524.6188.1 ID=mRNA_L-elsbetiae_contig20524.6188.1|Name=mRNA_L-elsbetiae_contig20524.6188.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=234bp|location=Sequence derived from alignment at L-elsbetiae_contig20524:1697..1930- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig20524:1697..1930- >mRNA_L-elsbetiae_contig20524.6188.1 ID=mRNA_L-elsbetiae_contig20524.6188.1|Name=mRNA_L-elsbetiae_contig20524.6188.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=468bp|location=Sequence derived from alignment at L-elsbetiae_contig20524:1697..1930- (Laminarionema elsbetiae ELsaHSoW15)back to top |