Homology
BLAST of mRNA_L-elsbetiae_contig19358.5732.1 vs. uniprot
Match:
D7FR19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR19_ECTSI)
HSP 1 Score: 84.7 bits (208), Expect = 1.140e-18
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1
Query: 100 MLTDMPCEKGLNFRFFDQRTNKQWFKGYWALARIIR 207
MLTDMPCEKGLNFRFFDQRTNKQWFKGYWALARIIR
Sbjct: 1 MLTDMPCEKGLNFRFFDQRTNKQWFKGYWALARIIR 36
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19358.5732.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 1.14e-18 / Id = 100.00 Sequence D7FR19_ECTSI
Match Name E-value Identity Description
D7FR19_ECTSI 1.140e-18 100.00 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 85.1
Seed ortholog evalue 1.4e-14
Seed eggNOG ortholog 2880.D7FR19
Hectar predicted targeting category other localisation
EggNOG OGs 2CBPC@1,2S5NA@2759
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
Ec32 ortholog description Acyl-CoA N-acyltransferase
Ec32 ortholog Ec-09_002870.1
Exons 1
Model size 207
Cds size 207
Stop 0
Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815802.8303816-CDS-L-elsbetiae_contig19358:87..294 1622815802.8303816-CDS-L-elsbetiae_contig19358:87..294 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig19358 88..294 +
1691683112.524565-CDS-L-elsbetiae_contig19358:87..294 1691683112.524565-CDS-L-elsbetiae_contig19358:87..294 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig19358 88..294 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19358.5732.1
>prot_L-elsbetiae_contig19358.5732.1 ID=prot_L-elsbetiae_contig19358.5732.1|Name=mRNA_L-elsbetiae_contig19358.5732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=69bp
PPPPQPPSPPHPPREQGEKCQVCGHKGKGKIYQMLTDMPCEKGLNFRFFD QRTNKQWFKGYWALARIIR back to top mRNA from alignment at L-elsbetiae_contig19358:88..294+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig19358.5732.1 ID=mRNA_L-elsbetiae_contig19358.5732.1|Name=mRNA_L-elsbetiae_contig19358.5732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=207bp|location=Sequence derived from alignment at L-elsbetiae_contig19358:88..294+ (Laminarionema elsbetiae ELsaHSoW15)CCCCCCCCCCCCCAACCTCCATCTCCACCTCACCCCCCGCGGGAGCAGGG
AGAGAAGTGCCAGGTGTGCGGGCACAAGGGCAAGGGCAAGATCTACCAGA
TGCTGACGGACATGCCCTGTGAGAAGGGGCTAAACTTCCGGTTTTTCGAC
CAGCGCACCAACAAGCAGTGGTTCAAGGGCTACTGGGCTCTCGCGCGCAT
CATCCGA back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19358:88..294+
>mRNA_L-elsbetiae_contig19358.5732.1 ID=mRNA_L-elsbetiae_contig19358.5732.1|Name=mRNA_L-elsbetiae_contig19358.5732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=414bp|location=Sequence derived from alignment at L-elsbetiae_contig19358:88..294+ (Laminarionema elsbetiae ELsaHSoW15) CCCCCCCCCCCCCAACCTCCATCTCCACCTCACCCCCCGCGGGAGCAGGG AGAGAAGTGCCAGGTGTGCGGGCACAAGGGCAAGGGCAAGATCTACCAGA TGCTGACGGACATGCCCTGTGAGAAGGGGCTAAACTTCCGGTTTTTCGAC CAGCGCACCAACAAGCAGTGGTTCAAGGGCTACTGGGCTCTCGCGCGCAT CATCCGACCCCCCCCCCCCCAACCTCCATCTCCACCTCACCCCCCGCGGG AGCAGGGAGAGAAGTGCCAGGTGTGCGGGCACAAGGGCAAGGGCAAGATC TACCAGATGCTGACGGACATGCCCTGTGAGAAGGGGCTAAACTTCCGGTT TTTCGACCAGCGCACCAACAAGCAGTGGTTCAAGGGCTACTGGGCTCTCG CGCGCATCATCCGA back to top