mRNA_L-elsbetiae_contig1925.5697.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1925.5697.1 vs. uniprot
Match: A0A6H5JWN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN8_9PHAE) HSP 1 Score: 417 bits (1073), Expect = 1.020e-139 Identity = 220/251 (87.65%), Postives = 238/251 (94.82%), Query Frame = 1 Query: 1 MLFDYFKVPAEFQSRVLNWGIIGAVTMRAVMIVVGVAAIQRFRGVMLVFAGILVMSSIKLLMEGAEEEH-DSAALEGNMVLRFANWLMDSTDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLAISHDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYDISVGLSLAVVCGILSVGAIASVISNRRRDAAVA----SSVSGGGSSGLTFESLSAD 738 MLFDYFKVPAEFQSRVLNWGIIGAV+MRA+MIVVGVAAIQRFRGVMLVFAGILV+SS+KLLMEG EE+H DS+ALEGNMVLR ANW+MDSTDYYDGEKFFTLVDG KKATPLLLCLICIE+TDFVFAVDSIPAVLAIS DTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHY+I VG SL+VVCG+L++G IASVISN+RRDAA+A S+V+GGGSSGLTFES SA+ Sbjct: 188 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSLKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLSVVCGLLAIGVIASVISNKRRDAALAAADASAVTGGGSSGLTFESFSAE 438
BLAST of mRNA_L-elsbetiae_contig1925.5697.1 vs. uniprot
Match: D8LEA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA4_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 3.150e-138 Identity = 217/251 (86.45%), Postives = 232/251 (92.43%), Query Frame = 1 Query: 1 MLFDYFKVPAEFQSRVLNWGIIGAVTMRAVMIVVGVAAIQRFRGVMLVFAGILVMSSIKLLMEGAEEEH-DSAALEGNMVLRFANWLMDSTDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLAISHDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYDISVGLSLAVVCGILSVGAIASVISNRRRDAAVA----SSVSGGGSSGLTFESLSAD 738 MLFDYFKVPAEFQSRVLNWGIIGAV+MRA+MIVVGVAAIQRFRGVMLVFAGILV+SS KLLMEG EE+H DS+ALEGNMVLR ANW+MDSTDYYDGEKFFTLVDG KKATPLLLCLICIE+TDFVFAVDSIPAVLAIS DTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHY+I VG SL VVCG+L++GAIASVISN+RRDAA+A S+V SGLTFES SA+ Sbjct: 1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYEIGVGTSLTVVCGLLAIGAIASVISNKRRDAALAAADASAVXXXXXSGLTFESFSAE 251
BLAST of mRNA_L-elsbetiae_contig1925.5697.1 vs. uniprot
Match: A0A835ZA94_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA94_9STRA) HSP 1 Score: 299 bits (765), Expect = 2.680e-97 Identity = 158/222 (71.17%), Postives = 187/222 (84.23%), Query Frame = 1 Query: 1 MLFDYFKVPAEFQSRVLNWGIIGAVTMRAVMIVVGVAAIQRFRGVMLVFAGILVMSSIKLLMEGAEEEHDSAALEGNMVLRFANWLMDSTDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLAISHDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYDISVGLSLAVVCGILSVGAIASVISNRRR 666 MLF+YFKVPA +Q RVL WGIIGAV+MRAVMIVVGVAAIQRFRGV+L FA IL+ SS+KLL E +E+ D L N+VLR + + + STD Y+GEKFFT+VDG K ATPLLLCL+CIEL+DFVFAVDSIPAVL +S DTFIVY+SNVFAI A+RS+YTLVSHAI+DLPYLKP+VALVLGFVG KM AE+FHY+I +G+SL+VV +LS G AS+ NRRR Sbjct: 44 MLFEYFKVPAAYQGRVLTWGIIGAVSMRAVMIVVGVAAIQRFRGVILAFAAILLASSVKLLTEKEDEDGD---LSNNIVLRISKFFVRSTDKYEGEKFFTVVDGKKMATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDTFIVYSSNVFAILALRSLYTLVSHAITDLPYLKPSVALVLGFVGLKMCAEYFHYEIGIGVSLSVVAVLLSGGVGASIWDNRRR 262
BLAST of mRNA_L-elsbetiae_contig1925.5697.1 vs. uniprot
Match: A0A7S3XZU5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU5_HETAK) HSP 1 Score: 280 bits (716), Expect = 3.200e-88 Identity = 143/221 (64.71%), Postives = 180/221 (81.45%), Query Frame = 1 Query: 1 MLFDYFKVPAEFQSRVLNWGIIGAVTMRAVMIVVGVAAIQRFRGVMLVFAGILVMSSIKLLMEGAEEEHDSAALEGNMVLRFANWLMDSTDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLAISHDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYDISVGLSLAVVCGILSVGAIASVISNRR 663 MLFDYFKVP +FQSRVL WGIIGA++MR VMIV+GVAAIQ+FR V L+FAGIL+ S K++ E EEE LE N++++ +N ++ ST YDGEKFFT +DGVK ATPLL+CLICIEL+DFVFAVDSIPAV+ ++ D FIVY+SN+FAI A+RS+YTLV+ A+ DLPYLKPAVALVLGFVG KM AE+FHY++ +G+SL VV +L G +ASVI+ + Sbjct: 150 MLFDYFKVPMQFQSRVLTWGIIGAMSMRLVMIVLGVAAIQKFRSVTLLFAGILIFSGYKMINESEEEED----LEDNVIMKLSNKMVKSTTQYDGEKFFTKIDGVKYATPLLMCLICIELSDFVFAVDSIPAVIGVTKDPFIVYSSNLFAIAALRSLYTLVAKAVDDLPYLKPAVALVLGFVGCKMAAEYFHYEVGIGISLGVVGILLGGGIVASVIAKNK 366
BLAST of mRNA_L-elsbetiae_contig1925.5697.1 vs. uniprot
Match: A0A7S1UHU3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHU3_9STRA) HSP 1 Score: 269 bits (688), Expect = 6.210e-85 Identity = 133/217 (61.29%), Postives = 173/217 (79.72%), Query Frame = 1 Query: 1 MLFDYFKVPAEFQSRVLNWGIIGAVTMRAVMIVVGVAAIQRFRGVMLVFAGILVMSSIKLLMEGAEEEHDSAALEGNMVLRFANWLMDSTDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLAISHDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYDISVGLSLAVVCGILSVGAIASVI 651 +LFDYFKVPA FQSRVLNWGIIGA+ MR VMIV+GVAAIQRFR VML+FAG+L++++ +L+ E E + L N ++ + ++++ DYYD EKFFT+ +G+++ATPLLLCL+CIEL+DFVFAVDSIPAVL +S D FIVY SN+FAI A+RS+Y LV+ AI D+PYLKPAV LVLGFVG KM E++HY++S +SLAV+ GIL + S+I Sbjct: 84 LLFDYFKVPAAFQSRVLNWGIIGAIAMRGVMIVLGVAAIQRFRVVMLLFAGLLLVAAGRLVKESFAVEEEEEDLSSNWIMNVSRKMVNAVDYYDDEKFFTMSNGIQRATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDPFIVYTSNIFAIAALRSLYVLVAKAIDDMPYLKPAVGLVLGFVGCKMLGEYYHYEVSTAVSLAVIMGILGGSIVLSLI 300
BLAST of mRNA_L-elsbetiae_contig1925.5697.1 vs. uniprot
Match: A0A7S2Y1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S8_9STRA) HSP 1 Score: 268 bits (685), Expect = 6.080e-84 Identity = 140/226 (61.95%), Postives = 179/226 (79.20%), Query Frame = 1 Query: 1 MLFDYFKVPAEFQSRVLNWGIIGAVTMRAVMIVVGVAAIQRFRGVMLVFAGILVMSSIKLLMEGAEEEHDSAALEGNMVLRFANWLMDSTDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLAISHDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYDISVGLSLAVVCGILSVGAIASVISNRRRDAAV 678 MLFDYFKVP +Q+R L WGIIGA++MR VMI++GVAAIQ+FR V+L+FAGIL+ SS KL E EE D L N++L+ +N + S D+YDGEKFFT V+GV+ ATPLL+CL+CIEL+DFVFAVDSIPAV+ ++ D FIVY+SN+FAI A+RS+Y LV+ A++DLPYL+PAVALVL FVG KM AEFFHY++S +SLAVV +L G SV+ N+ + AAV Sbjct: 136 MLFDYFKVPLAYQNRCLTWGIIGAMSMRLVMILLGVAAIQKFRVVILLFAGILLASSWKLFFE---EEGDED-LSDNVILKISNKMFKSVDHYDGEKFFTKVNGVRHATPLLMCLVCIELSDFVFAVDSIPAVIGVTKDPFIVYSSNMFAIMALRSLYVLVAQAVTDLPYLRPAVALVLAFVGAKMIAEFFHYELSTAISLAVVAAVLGGGIALSVVHNKAKAAAV 357
BLAST of mRNA_L-elsbetiae_contig1925.5697.1 vs. uniprot
Match: A0A7S2SRH4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRH4_9STRA) HSP 1 Score: 261 bits (668), Expect = 2.550e-82 Identity = 138/221 (62.44%), Postives = 171/221 (77.38%), Query Frame = 1 Query: 1 MLFDYFKVPAEFQSRVLNWGIIGAVTMRAVMIVVGVAAIQRFRGVMLVFAGILVMSSIKLLMEGAEEEHDSAALEGNMVLRFANWLMDSTDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLAISHDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYDISVGLSLAVVCGILSVGAIASVISNRR 663 +LFDYFKVP Q + L WGIIGAV MRA+MIV GVAAI+ FR V+LVFAGIL+ S++KL E EE L N V+R A L S DY+DG FFT+V+GV++ATPLLLC++CIEL+DFVFAVDSIPAVL+IS D IV +SN+FAI A+RS+YTLV+ A++DLPYL+PAVAL+LGFVG KM E+FH +IS GLSL+VV +LS G S+IS +R Sbjct: 71 LLFDYFKVPLALQPKALQWGIIGAVVMRAIMIVFGVAAIKHFRPVILVFAGILMASAVKLFFENEAEED----LSENAVMRIAKSLCPSVDYFDGSNFFTMVNGVRRATPLLLCVVCIELSDFVFAVDSIPAVLSISKDQLIVLSSNIFAIMALRSLYTLVARAVNDLPYLRPAVALILGFVGTKMALEYFHVEISTGLSLSVVAALLSGGIGLSLISQKR 287
BLAST of mRNA_L-elsbetiae_contig1925.5697.1 vs. uniprot
Match: A0A7S2RH37_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH37_9STRA) HSP 1 Score: 257 bits (656), Expect = 3.960e-80 Identity = 129/222 (58.11%), Postives = 171/222 (77.03%), Query Frame = 1 Query: 1 MLFDYFKVPAEFQSRVLNWGIIGAVTMRAVMIVVGVAAIQRFRGVMLVFAGILVMSSIKLLMEGAEEEHDSAALEGNMVLRFANWLMDSTDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLAISHDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYDISVGLSLAVVCGILSVGAIASVISNRRR 666 MLF+YF+VP +Q RVL WGIIGAV MR +MIV GVAA+Q+FR V+L+FA IL++S++KL E E E L N V+R + + + + + YDG+KFFT++DG ++ATPLLLCL+CIEL+DFVFAVDSIPAV+ +S D IVY+SN+FAI +RS+YTLV+ A+ DLPYL+PAVALVL F+G KM EFFHY+IS+ LSL VV +L+ G + S+I + R Sbjct: 66 MLFNYFQVPLSYQGRVLTWGIIGAVVMRGIMIVAGVAAVQKFRMVILLFAAILMLSAVKLFFESDEPED----LSNNTVMRLSKFAVGAVEEYDGDKFFTILDGQRRATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDLLIVYSSNIFAIMGLRSLYTLVAKAVQDLPYLRPAVALVLAFIGLKMVMEFFHYEISISLSLGVVVTLLASGIVLSLIHKKPR 283
BLAST of mRNA_L-elsbetiae_contig1925.5697.1 vs. uniprot
Match: F0Y6P3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P3_AURAN) HSP 1 Score: 253 bits (646), Expect = 1.150e-78 Identity = 128/222 (57.66%), Postives = 172/222 (77.48%), Query Frame = 1 Query: 1 MLFDYFKVPAEFQSRVLNWGIIGAVTMRAVMIVVGVAAIQRFRGVMLVFAGILVMSSIKLLMEGAEEEHDSAALEGNMVLRFANWLMDSTDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLAISHDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYDISVGLSLAVVCGILSVGAIASVISNRRR 666 MLF+YF+VP FQ RVL+WGI+GA+ MR VMIV GVAA++RFR L+FAGIL++SS+KLLMEG E+E + N+V+R + L+ +T YDG++FFT+VDG K+ATPLLLCL+C+EL+D VFAVDSIPAVL IS D F+VY+SNVFAI +R++Y LV+ A+ + YLKPAV VL F+ KM E+FHY I G SL VV +L++GA AS+++++R+ Sbjct: 63 MLFEYFRVPPAFQQRVLSWGIVGAILMRGVMIVAGVAAVKRFRWTSLLFAGILLLSSVKLLMEGDEDED----VGDNLVMRLSRKLVGATTEYDGDRFFTVVDGAKRATPLLLCLVCVELSDVVFAVDSIPAVLGISTDPFVVYSSNVFAIAGLRALYALVAKAVDSMVYLKPAVCAVLVFISVKMILEYFHYAIGTGASLCVVVCLLALGAAASLLASKRK 280
BLAST of mRNA_L-elsbetiae_contig1925.5697.1 vs. uniprot
Match: W7THX1_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7THX1_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.110e-74 Identity = 133/230 (57.83%), Postives = 172/230 (74.78%), Query Frame = 1 Query: 1 MLFDYFKVPAEFQSRVLNWGIIGAVTMRAVMIVVGVAAIQRFRGVMLVFAGILVMSSIKLLME----GAEEEHDSAALEGNMVLRFANWLMDSTDYYDGEKFFTLVDGVKKATPLLLCLICIELTDFVFAVDSIPAVLAISHDTFIVYASNVFAICAMRSIYTLVSHAISDLPYLKPAVALVLGFVGGKMFAEFFHYDISVGLSLAVVCGILSVGAIASVISNR---RRD 669 MLF+YFKVP E+QSR L+WGI+GAV MR +MI VGVAAIQRFR V+L+FAG+L+ S+ KLL E G EE+ L N+++ +A L+ + D YDG+ FFT +G + ATPL +CLICIEL+DFVFAVDSIPAVL +S D IVY+SN+FAI A+RS+YTLV+ A++ L Y+KP+VALVL FVGGKM AEFFH ++ + +SLAVV +L G S++ R RRD Sbjct: 158 MLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEED-----LSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQRVLARRD 382 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1925.5697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1925.5697.1 >prot_L-elsbetiae_contig1925.5697.1 ID=prot_L-elsbetiae_contig1925.5697.1|Name=mRNA_L-elsbetiae_contig1925.5697.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=364bp MLFDYFKVPAEFQSRVLNWGIIGAVTMRAVMIVVGVAAIQRFRGVMLVFAback to top mRNA from alignment at L-elsbetiae_contig1925:13272..16910+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1925.5697.1 ID=mRNA_L-elsbetiae_contig1925.5697.1|Name=mRNA_L-elsbetiae_contig1925.5697.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3639bp|location=Sequence derived from alignment at L-elsbetiae_contig1925:13272..16910+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1925:13272..16910+ >mRNA_L-elsbetiae_contig1925.5697.1 ID=mRNA_L-elsbetiae_contig1925.5697.1|Name=mRNA_L-elsbetiae_contig1925.5697.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2184bp|location=Sequence derived from alignment at L-elsbetiae_contig1925:13272..16910+ (Laminarionema elsbetiae ELsaHSoW15)back to top |