mRNA_L-elsbetiae_contig19210.5678.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig19210.5678.1
Unique NamemRNA_L-elsbetiae_contig19210.5678.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig19210.5678.1 vs. uniprot
Match: D8LRN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN5_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 1.910e-120
Identity = 193/239 (80.75%), Postives = 207/239 (86.61%), Query Frame = 1
Query:    1 LRSNGQTKKLTVGVLQLSAEVTHYIVPAKESAAYLQAKATNNTDYLLLASDDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHSTCVSNNKKVPVTCVVVDAMPRSSNDIIKVVLKQPVPASVSESEAITDDVLVSAALEMFGEANNDTHAQQQXXXXXXXXTSAATHVAGVIKSPSNHLAWVGKIAPQGEISIPLEYTVEWPTGKEIE 717
            ++SN Q KKLTVGVLQLSAEV+HY+VPAKESAAYLQAKATNNTDYLLLAS+DVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHST +SN KKVPVTCVVVDAMPRS+N+IIKV LKQP P+ V+ESEAITDDVL SAALEM    +  +   Q           A   V GVIKSPSNHLAWVGKIAPQGEIS+PLEYTVEWPTGK+IE
Sbjct:  439 IKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHSTSISNKKKVPVTCVVVDAMPRSTNEIIKVTLKQPPPSGVTESEAITDDVLASAALEMCEAGDRGSSNVQMPP--------AVHGVLGVIKSPSNHLAWVGKIAPQGEISVPLEYTVEWPTGKQIE 669          
BLAST of mRNA_L-elsbetiae_contig19210.5678.1 vs. uniprot
Match: D8LRN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN8_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 1.120e-116
Identity = 189/241 (78.42%), Postives = 205/241 (85.06%), Query Frame = 1
Query:    1 LRSNGQTKKLTVGVLQLSAEVTHYIVPAKESAAYLQAKATNNTDYLLLASDDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHSTCVSNNKKVPVTCVVVDAMPRSSNDIIKVVLKQPVPASVSESEAITDDVLVSAALEMFG--EANNDTHAQQQXXXXXXXXTSAATHVAGVIKSPSNHLAWVGKIAPQGEISIPLEYTVEWPTGKEIE 717
            ++SNGQ KKLTVG LQLS EVTHYIVPAK  AAYLQAKATNNTDYLLLAS+DVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHST +SNNK VPVTCVVVDA+PRS++DIIKV LK+P+PASVSE EAITDD LVS ALE FG  E N++   ++         T A + V GV KSPSNHLAWVGKIAPQG +S+PL YTVEWP  KEIE
Sbjct:  397 IKSNGQMKKLTVGELQLSVEVTHYIVPAKAPAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHSTLISNNKTVPVTCVVVDALPRSTDDIIKVTLKEPLPASVSECEAITDDSLVSIALETFGGGEGNSNNSTRRPPA------TPAESLVTGVFKSPSNHLAWVGKIAPQGGVSVPLTYTVEWPFEKEIE 631          
BLAST of mRNA_L-elsbetiae_contig19210.5678.1 vs. uniprot
Match: D8LRN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN7_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 2.400e-115
Identity = 187/241 (77.59%), Postives = 206/241 (85.48%), Query Frame = 1
Query:    1 LRSNGQTKKLTVGVLQLSAEVTHYIVPAKESAAYLQAKATNNTDYLLLASDDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHSTCVSNNKKVPVTCVVVDAMPRSSNDIIKVVLKQPVPASVSESEAITDDVLVSAALEMFG--EANNDTHAQQQXXXXXXXXTSAATHVAGVIKSPSNHLAWVGKIAPQGEISIPLEYTVEWPTGKEIE 717
            ++SNGQ KKLTVG LQLS EVTHYIVPAK  AAYLQAKATNNTDYLLLAS++VSIFFDNSFVTKTSL+SVSPGESFQTFLGIDPAVKITVAPPRKTS KRGI SKSNHVTHTHST +SN KKVPVTCVVVDAMPRS++D+IKV LK+P+PASVSE EAITDD LVS ALEM+G  E N + + Q+         T A + V GV+KSPSNHLAWVGKIAPQG +SIPL+YTVEWP  KEIE
Sbjct:  408 IKSNGQMKKLTVGELQLSVEVTHYIVPAKAPAAYLQAKATNNTDYLLLASNNVSIFFDNSFVTKTSLSSVSPGESFQTFLGIDPAVKITVAPPRKTSTKRGIISKSNHVTHTHSTLISNTKKVPVTCVVVDAMPRSTDDVIKVTLKEPLPASVSECEAITDDSLVSVALEMYGGGEGNINNNTQRPPA------TPAGSLVTGVMKSPSNHLAWVGKIAPQGGVSIPLKYTVEWPFEKEIE 642          
BLAST of mRNA_L-elsbetiae_contig19210.5678.1 vs. uniprot
Match: D8LRN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN6_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 4.250e-115
Identity = 184/239 (76.99%), Postives = 202/239 (84.52%), Query Frame = 1
Query:    1 LRSNGQTKKLTVGVLQLSAEVTHYIVPAKESAAYLQAKATNNTDYLLLASDDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHSTCVSNNKKVPVTCVVVDAMPRSSNDIIKVVLKQPVPASVSESEAITDDVLVSAALEMFGEANNDTHAQQQXXXXXXXXTSAATHVAGVIKSPSNHLAWVGKIAPQGEISIPLEYTVEWPTGKEIE 717
            ++SNGQ KKLTVGVLQLS EVTHYIVPAK  AAYLQAKATNNTDYLLLAS+DVSIFFDNSFVTKTSL SVSPGESFQTFLGIDPAVKI VAPPRKTSKKRGI SKSNHVTHTHST +SNNKKVPVT VVVDAMPRS++D+IKV LK+P+ ASVSE EAITDD LVS ALEMFG    + +   Q        T A + V GVIK+PSNHLAWVGKIAP+G +S+PLEYT+EWP  KEI+
Sbjct:  365 IKSNGQMKKLTVGVLQLSVEVTHYIVPAKAPAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLASVSPGESFQTFLGIDPAVKIIVAPPRKTSKKRGIISKSNHVTHTHSTLISNNKKVPVTFVVVDAMPRSTDDVIKVTLKEPLSASVSECEAITDDALVSIALEMFGSGEGNINNSTQHPPA----TPAGSLVTGVIKNPSNHLAWVGKIAPRGGVSVPLEYTLEWPFEKEID 599          
BLAST of mRNA_L-elsbetiae_contig19210.5678.1 vs. uniprot
Match: D8LRM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM9_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 5.980e-95
Identity = 155/244 (63.52%), Postives = 191/244 (78.28%), Query Frame = 1
Query:    1 LRSNGQTKKLTVGVLQLSAEVTHYIVPAKESAAYLQAKATNNTDYLLLASDDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHSTCVSNNKKVPVTCVVVDAMPRSSNDIIKVVLKQPVPASVSES-EAITDDVLVSAALEMFGEANNDTHAQQQXXXXXXXXTSAA-----THVAGVIKSPSNHLAWVGKIAPQGEISIPLEYTVEWPTGKEI 714
            ++ NG++ KL+V VLQLS +V HY+VP++++ A+LQA ATNNTDYLLLAS+DVSIFFDNSFV KTSLTSVSPGESFQTFLGIDPAVK+ VAPPRKTSK++G+F K +HV H HST +SN KKVPVTCVV++A+P S+N+IIKV L+QP PA V+ES EA+ D+ LV A L MFG    D    +         T+AA     T +AG+ K P+NHLAWV K+APQ +ISIPLEYTVEWP GKE+
Sbjct:  526 VKGNGESTKLSVAVLQLSTDVVHYVVPSRDATAFLQANATNNTDYLLLASEDVSIFFDNSFVAKTSLTSVSPGESFQTFLGIDPAVKVKVAPPRKTSKQKGLFGKVDHVAHIHSTVISNKKKVPVTCVVIEALPLSTNEIIKVKLQQPAPAKVTESVEAVNDEALVDAGLAMFGGQGKD---YEDDGGTTKGSTAAAPEVVKTGIAGITKGPTNHLAWVLKVAPQDDISIPLEYTVEWPIGKEV 766          
BLAST of mRNA_L-elsbetiae_contig19210.5678.1 vs. uniprot
Match: A0A6H5KAH2_9PHAE (DUF4139 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAH2_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.420e-64
Identity = 145/278 (52.16%), Postives = 164/278 (58.99%), Query Frame = 1
Query:    1 LRSNGQTKKLTVGVLQLSAEVTHYIVPAKESAAYLQAK-----------------------------ATNNTDYLLLASDDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHS--TCVS-----NNKKVPVTCVVVDAMPRSSNDI--------------------------------IKVVLKQPVPASVSESEAITDDVLVSAALEMFGEANNDTHAQQQXXXXXXXXTSAATHVAGVIKSPSNHL 630
            ++SN + KKLTVGVLQLSAEV+HY+VPAKESAAYLQAK                             ATNNTDYLLLAS+DVSIFFDNSF+TKTSLTSV PGESFQTFLGIDPAVKITV P RKTSKKRGIFSKSNHVTHTH   +C       + K   ++   + A+  S+N                                  + V+LKQP P+SVSESEAITDD L SAALEM  EA +   +  Q          A   V GVIKSPSNHL
Sbjct:  246 IKSNARAKKLTVGVLQLSAEVSHYVVPAKESAAYLQAKEYVSTHRHQGSVPSKVKVSMLLLILHANQATNNTDYLLLASNDVSIFFDNSFITKTSLTSVCPGESFQTFLGIDPAVKITVGPLRKTSKKRGIFSKSNHVTHTHRYRSCTQTITEIDEKSRTISFETLTAVAGSTNATHVSMLASVFRYARNWRFVAHFDRSTSISNKKKVPVILKQPPPSSVSESEAITDDALASAALEMC-EAGDGGSSNVQTPP-------AVNGVLGVIKSPSNHL 515          
BLAST of mRNA_L-elsbetiae_contig19210.5678.1 vs. uniprot
Match: A0A836CA38_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA38_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.390e-55
Identity = 129/311 (41.48%), Postives = 168/311 (54.02%), Query Frame = 1
Query:    7 SNGQTKKLTVGVLQLSAEVTHYIVPAKESAAYL------------------------------------------------QAKATNNTDYLLLASDDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKIT--------------------------VAPPRKTSKKRGIFSKSNHVTHTHSTCVSNNKKVPVTCVVVDAMPRSSNDIIKVVLKQPVPASVSESEAITDDVLVSAALEMFGEANNDTHAQQQXXXXXXXXTSAATHVAGVIKSPSNHLAWVGKIAPQGEISIPLEYTVEWPTGKEIE 717
            S+   KKLTVG+L+LSA+VTHY+VPA E+AAYL                                                +AK  N TDYLLLASDDVSIFFDN FVTKTSL +VSPGE F  FLG+DPAVK++                           APPRKT+++RG+ SK+  VTH H T ++N K VP+T  +VDA+PRSS D+IKV+LK P P +V++     ++ LVSAALE+             XXXXXXX T        V+++ S  L W+ ++ P  +  +P EY++EWP  K IE
Sbjct:  569 SDFTAKKLTVGILELSADVTHYVVPALEAAAYLXXXXXXXXXXXXKVRAAREALPLAKRHVXXXXXXXXXXXXXXXXXXXXKAKVLNTTDYLLLASDDVSIFFDNRFVTKTSLRTVSPGEGFDVFLGVDPAVKVSGSTDARARVDAGXXXXXXXXXXXXXXYAPPRKTTRRRGLLSKTQLVTHAHCTTLNNAKAVPITVALVDAVPRSSEDLIKVMLKDPAPNTVTDVSVDANEALVSAALELLEGEGXXXXXXXXXXXXXXXGTLR------VVQNESGKLVWIVRVPPHTDARVPFEYSIEWPADKNIE 873          
BLAST of mRNA_L-elsbetiae_contig19210.5678.1 vs. uniprot
Match: A0A139AUS0_GONPJ (DUF4139 domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AUS0_GONPJ)

HSP 1 Score: 108 bits (270), Expect = 1.060e-23
Identity = 68/235 (28.94%), Postives = 122/235 (51.91%), Query Frame = 1
Query:   19 TKKLTVGVLQLSAEVTHYIVPAKESAAYLQAKATNNTDYLLLASDDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHSTCVSNNKKVPVTCVVVDAMPRSSNDIIKVVL-KQPVPASVSESEAITDDVLVSA--ALEMFGEANNDTHAQQQXXXXXXXXTSAATHVAGVIKSPSNHLAWVGKIAPQGEISIPLEYTVEWPTGKEI 714
            T K+TV ++ LS +  H+  P      YL+AK  N+++Y LL     S+F DN+FV K++L +VSP E+F+  LG+DP++++T  P  KT++  GI SKS  +  T +  V N K      V++D +P S ++ +KV L   P P  V   +   +  +++   ++E       D   + +              V   + + +N L WV K+A      +  +Y++++P+G+++
Sbjct:  245 THKVTVAIIDLSPKFLHFTYPRASEYVYLKAKVKNDSEYALLPGP-ASVFLDNNFVAKSTLDNVSPQETFECSLGVDPSIRVTRRPVVKTTETSGILSKSEVLRFTQTIDVKNTKTSSAKVVLIDQVPWSGDEKLKVTLIDPPQPTQVVAGDTPGERRIINRTKSMESLAAVTRDEDIELRDG-----------EVQTRLNTDTNCLEWVVKLAAGKSSVLKFQYSIQYPSGEKV 467          
BLAST of mRNA_L-elsbetiae_contig19210.5678.1 vs. uniprot
Match: A0A7S1N9K3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N9K3_9EUGL)

HSP 1 Score: 108 bits (270), Expect = 1.950e-23
Identity = 78/243 (32.10%), Postives = 118/243 (48.56%), Query Frame = 1
Query:    1 LRSNGQTKKLTVGVLQLSAEVTHYIVPAKESAAYLQAKATNNTDYLLLASDDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKT-SKKRGIFS-KSNHVTHTHSTCVSNNKKVPVTCVVVDAMPRSSNDIIKVVLKQPVPASVSESEAITDDVLVSAALEMFGEANNDTHAQQQXXXXXXXXTSAATHVAGVIKSPSNHLAWVGKIAPQGEISIPLEYTVEWPT--GKEIE 717
            + SN +  K+TV  + L   + H+  PA E  AYLQA   N+++Y LLASD VS+FFD SFVT ++L   SPGE    FLG+D ++K+       +  K  G+F  K + +   + T V N K VP+T  +V  +P+S+N  I+V L QP  + V   ++              G +++    + Q             H   V    +N++     + PQ    +P  Y V WP   G+EIE
Sbjct:  398 IASNDKEHKVTVAFIPLVPYLCHFTTPALEDKAYLQANTVNSSNYPLLASDRVSVFFDGSFVTTSTLRHTSPGEKIVMFLGVDTSIKVQHRLVTASHGKDGGLFKGKRSSMLFEYHTHVHNTKAVPITITIVCLLPKSNNKFIEVELLQPPASCVKTVDS--------------GTSSDMDRIENQ-------------HKRVVRNRITNNVVCTYTLEPQQSQKVPFSYQVAWPQDQGEEIE 613          
BLAST of mRNA_L-elsbetiae_contig19210.5678.1 vs. uniprot
Match: A0A7S4GFX8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GFX8_9EUGL)

HSP 1 Score: 106 bits (264), Expect = 1.280e-22
Identity = 75/244 (30.74%), Postives = 124/244 (50.82%), Query Frame = 1
Query:    7 SNGQTKKLTVGVLQLSAEVTHYIVPAKESAAYLQAKATNNTDYLLLASDDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKIT---VAPPRKTSKKRGIF--SKSNHVTHTHSTCVSNNKKVPVTCVVVDAMPRSSNDIIKVVLKQPVPASVSESEAITDDVLVSAALEMFGEANNDTHAQQQXXXXXXXXTSAATHVAGVIKSPSNHLAWVGKIAPQGEISIPLEYTVEWP--TGKEIE 717
            S+ +  K+TV ++QL+ ++ ++  PA E  AYLQA A N +++ LL S  V+IFFD SFVT T L   SPGES   FLG+D  VKIT   ++   +T ++  +F   K + + + ++T + N K   V   VV  +PR+S+D I V L QP   S+ +    T D +        GE    + +  Q                      +N++ +   +  Q ++++P  Y+++WP   G E++
Sbjct:  412 SDNKEHKVTVTIIQLTPKLRYFCTPALEERAYLQANAINTSEFPLLESHRVAIFFDGSFVTTTHLKHTSPGESINVFLGVDSNVKITHRLISSKSQTGREARLFHGKKMSGMVYEYATQIYNTKPSSVDITVVCLLPRASDDKIDVQLIQPPKESLFKG---TTDAVSELGNSATGEGQLASGSVMQNKI-------------------TNNIVFSRTLKAQEKVNLPFSYSMQWPPEAGNEVQ 633          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19210.5678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRN5_ECTSI1.910e-12080.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRN8_ECTSI1.120e-11678.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRN7_ECTSI2.400e-11577.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRN6_ECTSI4.250e-11576.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRM9_ECTSI5.980e-9563.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAH2_9PHAE1.420e-6452.16DUF4139 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CA38_9STRA1.390e-5541.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A139AUS0_GONPJ1.060e-2328.94DUF4139 domain-containing protein n=1 Tax=Gonapody... [more]
A0A7S1N9K3_9EUGL1.950e-2332.10Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S4GFX8_9EUGL1.280e-2230.74Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19210contigL-elsbetiae_contig19210:234..2863 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.4
Seed ortholog evalue1.3e-99
Seed eggNOG ortholog2880.D8LRN5
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515
EggNOG free text desc.Domain of unknown function (DUF4139)
EggNOG OGs28Q1A@1,2QWQ0@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size717
Cds size717
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19210.5678.1prot_L-elsbetiae_contig19210.5678.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig19210 234..2863 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815797.7952116-CDS-L-elsbetiae_contig19210:233..3471622815797.7952116-CDS-L-elsbetiae_contig19210:233..347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 234..347 +
1691683109.443877-CDS-L-elsbetiae_contig19210:233..3471691683109.443877-CDS-L-elsbetiae_contig19210:233..347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 234..347 +
1622815797.8094661-CDS-L-elsbetiae_contig19210:590..7371622815797.8094661-CDS-L-elsbetiae_contig19210:590..737Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 591..737 +
1691683109.458221-CDS-L-elsbetiae_contig19210:590..7371691683109.458221-CDS-L-elsbetiae_contig19210:590..737Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 591..737 +
1622815797.821545-CDS-L-elsbetiae_contig19210:964..10441622815797.821545-CDS-L-elsbetiae_contig19210:964..1044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 965..1044 +
1691683109.46814-CDS-L-elsbetiae_contig19210:964..10441691683109.46814-CDS-L-elsbetiae_contig19210:964..1044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 965..1044 +
1622815797.8337436-CDS-L-elsbetiae_contig19210:1527..16121622815797.8337436-CDS-L-elsbetiae_contig19210:1527..1612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 1528..1612 +
1691683109.47893-CDS-L-elsbetiae_contig19210:1527..16121691683109.47893-CDS-L-elsbetiae_contig19210:1527..1612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 1528..1612 +
1622815797.8483572-CDS-L-elsbetiae_contig19210:2108..23121622815797.8483572-CDS-L-elsbetiae_contig19210:2108..2312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 2109..2312 +
1691683109.49091-CDS-L-elsbetiae_contig19210:2108..23121691683109.49091-CDS-L-elsbetiae_contig19210:2108..2312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 2109..2312 +
1622815797.8603363-CDS-L-elsbetiae_contig19210:2776..28631622815797.8603363-CDS-L-elsbetiae_contig19210:2776..2863Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 2777..2863 +
1691683109.5018954-CDS-L-elsbetiae_contig19210:2776..28631691683109.5018954-CDS-L-elsbetiae_contig19210:2776..2863Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19210 2777..2863 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig19210.5678.1

>prot_L-elsbetiae_contig19210.5678.1 ID=prot_L-elsbetiae_contig19210.5678.1|Name=mRNA_L-elsbetiae_contig19210.5678.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
LRSNGQTKKLTVGVLQLSAEVTHYIVPAKESAAYLQAKATNNTDYLLLAS
DDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKR
GIFSKSNHVTHTHSTCVSNNKKVPVTCVVVDAMPRSSNDIIKVVLKQPVP
ASVSESEAITDDVLVSAALEMFGEANNDTHAQQQAQAQAQAPTSAATHVA
GVIKSPSNHLAWVGKIAPQGEISIPLEYTVEWPTGKEIE
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mRNA from alignment at L-elsbetiae_contig19210:234..2863+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig19210.5678.1 ID=mRNA_L-elsbetiae_contig19210.5678.1|Name=mRNA_L-elsbetiae_contig19210.5678.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2630bp|location=Sequence derived from alignment at L-elsbetiae_contig19210:234..2863+ (Laminarionema elsbetiae ELsaHSoW15)
CTCAGGTCCAACGGGCAGACGAAAAAACTGACCGTCGGTGTTTTGCAGCT CTCTGCTGAAGTCACACACTACATCGTTCCGGCCAAAGAATCCGCCGCCT ACCTGCAAGCCAAGGTATTTGTTTAAGAGTACTTTGGTGCATTCGCGCAT TCGAGCACTAGAGAGCTTTCTGACCACTAGTGGACTGTACATAGACGAGC GGCAGCATCGACCCTTCTTCAGTGCATGGAGGGAAATGATGACGTGTGTG TCAGGTACGTTTTCGATAGGAATCGAGTCGACGCGGGTTTCCTGGCATGG AAAGGTTAAGGATCGTTGGCCCCTATTGTTTGTTCGTTCGTTTTGCTTGC ACCGCAGGCTACGAACAACACCGACTACCTGCTCTTGGCAAGCGACGACG TTTCTATCTTCTTCGACAACAGCTTCGTCACTAAGACTAGCCTCACTTCG GTGTCTCCCGGAGAGTCGTTCCAGACTTTCCTTGGCATCGACCCCGCGGT CAAGGTGAAAACGAAAGCAGCAGTCAGCGCAAAGTACTCCCAACAAATAT TCACCCTTGATTCCTAACGAATTGCCCGAATAGTATGTATGTCGGAGCTA TGGCGTGTTCGGGACAGGCTGGGTCTAGTCGGTGTTCTGGCTTACCGCTT GGCGCTCTGTTCCTTTTATTTTAAGCCCCCGTGATCAGTCCTTACCCCCA CTCTCCACATTCTCTTTTTGAATTGTGGCAGATCACTGTAGCCCCGCCTC GCAAGACGAGCAAGAAGCGCGGCATCTTCTCCAAGTCCAACCACGTCACG CACACGCACAGGTATTTCGGGGAGCAGCCAATATGGAGAGATCGGGCATC GATGTCACTCTTGAGACAAACGACAACCGTATACCTGCAACACGTATGTC AGGAGTGACGATTACCGGAGAGTGCCCGCTCTATCTTTCTCCGGGCGTGC CCCCGCAAACCAACCCAGGGTAGCTGCCGATCGCGACGGTACGGTATGGT ACGGCACATAATGATGAATGTGCCGGGTCCGATGGCCGTTGTTGTTGGTG AGAATGAACGAATCAACAGCATGATGCGGTAGTCGGAGTACACCAAGGCC TGACAATGCCCTACTTTTCATGAATTGTATCAACGATGAGTACCCTAGCC ACCTACTGCCCATTACGTGCGACGCGTCAAAACATTTGACCTCCTCAAAC ATTCCGGCACGCTGCCCGTTGCTGTTTTCGTAAATAACGCACTGCATCTT CTGCAATGCCGTCCTGCGTGCACGTGTGATGCGATCACTCACAGCACCTG CGTCTCCAACAACAAGAAGGTGCCCGTGACTTGCGTCGTCGTCGATGCCA TGCCGCGCTCTTCCAACGATATCATCAAGGTCAGAAATAGACAAACTGCT GTGGCGTTGTCTATTGTATTTATCTAGGCTACATAAAAGTATGTGCATAG CATGAAAAGCATCCCGACTACAAGTTAAAAGCCCGAATCGTACAGGGAAG AGAGGGTGTTGTCGGTGCATCAGCAGAGCCCAAGCGACCTTGCGTCACGA CAAGGGGTGGAGTGAAGTACATATGCACAAGAGAGGGGAAATATATCGGA TCGGGCAAGGTGCATTCCGTTTGGGGGGTCTGATGCGCAACTTGTGGTGG AATCGTATTTTGTCGGCTCATCTTTCGTAGTAGTCCTTGTGACCAGCCAC CATCGTGTTCGCGCGTGATGCGACAAAGCTCCGACACCTATTGATTTCAC GATCTAAGCCACGACGAGCTGCAGCGACTCCTTGGGAATAGGACGCCGCG ACGCCGACACAGCTTGGCAAACACCATTTATTTGATCTATGCCACACAAC TGGCAAACTTGTTGTTGTTGATTAGGTGGTCCTCAAGCAGCCGGTACCGG CGAGCGTGTCCGAGTCCGAAGCCATCACGGACGACGTGCTTGTATCGGCC GCGCTGGAGATGTTCGGGGAAGCGAACAACGATACTCATGCTCAACAGCA GGCACAGGCACAGGCTCAGGCACCAACGTCGGCGGCAACCCACGTGGCGG GTGTGATCAAGAGCCCGTCGAACCATCTGGTGAGCCCAAGTCCAGAACTC TGTATCTATCTGTTCGACCTTCGGGTTAGAGAGAGCAGGTACTCTCTATC GTATTGGGAAATAACTGATCAGTTGGAATTCAGATTTGGCTGCTGGTGCA AGTGTCCTGATGCACACAGGGTTCGAAGTCGGCTGGATATTGCCAAAACA TGTGGATCGCGAGTTTTCTTGGTGCGTGCGCACTCTTTGGCCCTGTACTG GGAGTAAAATATCATGGCAAAGCGTAAAGATGAGTCTACTAGAGTTAATC GTAGCAGCAGCCAATAATCCCCCCCTTCTCGCTCACCGCGTAAGAATATA CTAAAGCTGAAACTTATGTTATCGACCGATGTGCGCTGTTCCTCTCCGAC CCTCTTCGCCACGCTGCTCTTCGCATTCTCGTCGGGTTCCTTGCTGGCAA ATGAAACCGACCGACCGATGGTCGTTTTTGTTCTTATCTTCAGGCATGGG TCGGCAAGATTGCCCCTCAGGGCGAGATTTCTATCCCTCTCGAGTACACG GTGGAGTGGCCTACTGGCAAGGAGATCGAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig19210:234..2863+

>mRNA_L-elsbetiae_contig19210.5678.1 ID=mRNA_L-elsbetiae_contig19210.5678.1|Name=mRNA_L-elsbetiae_contig19210.5678.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1434bp|location=Sequence derived from alignment at L-elsbetiae_contig19210:234..2863+ (Laminarionema elsbetiae ELsaHSoW15)
CTCAGGTCCAACGGGCAGACGAAAAAACTGACCGTCGGTGTTTTGCAGCT
CTCTGCTGAAGTCACACACTACATCGTTCCGGCCAAAGAATCCGCCGCCT
ACCTGCAAGCCAAGCTCAGGTCCAACGGGCAGACGAAAAAACTGACCGTC
GGTGTTTTGCAGCTCTCTGCTGAAGTCACACACTACATCGTTCCGGCCAA
AGAATCCGCCGCCTACCTGCAAGCCAAGGCTACGAACAACACCGACTACC
TGCTCTTGGCAAGCGACGACGTTTCTATCTTCTTCGACAACAGCTTCGTC
ACTAAGACTAGCCTCACTTCGGTGTCTCCCGGAGAGTCGTTCCAGACTTT
CCTTGGCATCGACCCCGCGGTCAAGGCTACGAACAACACCGACTACCTGC
TCTTGGCAAGCGACGACGTTTCTATCTTCTTCGACAACAGCTTCGTCACT
AAGACTAGCCTCACTTCGGTGTCTCCCGGAGAGTCGTTCCAGACTTTCCT
TGGCATCGACCCCGCGGTCAAGATCACTGTAGCCCCGCCTCGCAAGACGA
GCAAGAAGCGCGGCATCTTCTCCAAGTCCAACCACGTCACGCACACGCAC
AGATCACTGTAGCCCCGCCTCGCAAGACGAGCAAGAAGCGCGGCATCTTC
TCCAAGTCCAACCACGTCACGCACACGCACAGCACCTGCGTCTCCAACAA
CAAGAAGGTGCCCGTGACTTGCGTCGTCGTCGATGCCATGCCGCGCTCTT
CCAACGATATCATCAAGCACCTGCGTCTCCAACAACAAGAAGGTGCCCGT
GACTTGCGTCGTCGTCGATGCCATGCCGCGCTCTTCCAACGATATCATCA
AGGTGGTCCTCAAGCAGCCGGTACCGGCGAGCGTGTCCGAGTCCGAAGCC
ATCACGGACGACGTGCTTGTATCGGCCGCGCTGGAGATGTTCGGGGAAGC
GAACAACGATACTCATGCTCAACAGCAGGCACAGGCACAGGCTCAGGCAC
CAACGTCGGCGGCAACCCACGTGGCGGGTGTGATCAAGAGCCCGTCGAAC
CATCTGGTGGTCCTCAAGCAGCCGGTACCGGCGAGCGTGTCCGAGTCCGA
AGCCATCACGGACGACGTGCTTGTATCGGCCGCGCTGGAGATGTTCGGGG
AAGCGAACAACGATACTCATGCTCAACAGCAGGCACAGGCACAGGCTCAG
GCACCAACGTCGGCGGCAACCCACGTGGCGGGTGTGATCAAGAGCCCGTC
GAACCATCTGGCATGGGTCGGCAAGATTGCCCCTCAGGGCGAGATTTCTA
TCCCTCTCGAGTACACGGTGGAGTGGCCTACTGGCAAGGAGATCGAAGCA
TGGGTCGGCAAGATTGCCCCTCAGGGCGAGATTTCTATCCCTCTCGAGTA
CACGGTGGAGTGGCCTACTGGCAAGGAGATCGAA
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