mRNA_L-elsbetiae_contig19109.5635.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19109.5635.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE) HSP 1 Score: 237 bits (605), Expect = 2.840e-72 Identity = 112/197 (56.85%), Postives = 140/197 (71.07%), Query Frame = 1 Query: 7 LVDLYKSKLGCKRGAEDAACASPTCAFCWRGRPGLTHGTIFCFNHWAEAPAEASAGIGTLRGGQMKEAADSPRTWLFSDTSRGNDIEVYVNDSAKRAGKRGLRLTTLGRIAYFFEHQGNDRRSDNAEERQQGEGEWTIWVAIQEFASAGVGNTRKVDVPTGCDMFTLRQKMSFFPASAIRSTVHMVHSCVTSGALSC 597 L LYK KLGC R C CAFCWRG GL +G++ CFNHW AP EASAG GTLRGG +K+AA+ W+ +TSR ND+E+YV+ SA+R+G+R TTLGRIA FFEHQGND R + Q+G GEWTIWVA++E+ + G+G RKV+ PTGCD+F LR+ + FF AS IRS VHM+H+C T+GA SC Sbjct: 337 LEALYKVKLGCGREESGPLCNDDVCAFCWRGNSGLHNGSVTCFNHWGNAPEEASAGTGTLRGGPVKDAAEFGNKWMIQETSRANDVELYVDTSARRSGERRQAATTLGRIACFFEHQGNDSRHLVDGKVQEG-GEWTIWVAVKEYVTVGMGQGRKVNYPTGCDVFYLRRSVQFFHASGIRSMVHMMHACATTGASSC 532
BLAST of mRNA_L-elsbetiae_contig19109.5635.1 vs. uniprot
Match: A0A6H5LF20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LF20_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.310e-52 Identity = 91/203 (44.83%), Postives = 127/203 (62.56%), Query Frame = 1 Query: 1 EALVDLYKSKLGCKRGAEDAACASPTCAFCWRGRP---GLTHGTIFCFNHWAEAPAEASAGIGTLRGGQMKEAADSPRTWLFSDTSRGNDIEVYVNDSAKRAGKRGLRLTTLGRIAYFFEHQGNDRRSDNAEERQQGEGEWTIWVAIQEFASAGVGNTRKVDVPTGCDMFTLRQKMSFFPASAIRSTVHMVHSCVTSGALSCG 600 + L Y GC R +A C + TC++CWR R GL H ++ FNHW AP EA+AG GT+RG +K+A W S SRG+D+E+Y+ + +R G+ GL TTLG++A+FFEHQGN R D+ E EGE+TIW+A+ E+ +AGVGN ++ TG F +R ++F+P AIR VHM+H+C TSG +CG Sbjct: 192 QELDQHYADYFGCGRIDGEAPCNTRTCSYCWRNRTYKDGLVHDSVEVFNHWGGAPGEANAGTGTVRGCPVKDAGRHSG-WTRSTASRGSDVEIYLTANDQREGRYGLEQTTLGKVAFFFEHQGNPWRRDD-ESNVLPEGEYTIWMAVSEYVTAGVGNNLQLHHTTGLAEFKMRHTLTFYPTPAIRRVVHMMHACPTSGESACG 392
BLAST of mRNA_L-elsbetiae_contig19109.5635.1 vs. uniprot
Match: A0A6H5JWC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC7_9PHAE) HSP 1 Score: 165 bits (418), Expect = 1.200e-44 Identity = 77/138 (55.80%), Postives = 101/138 (73.19%), Query Frame = 1 Query: 103 PGLTHGTIFCFNHWAEAPAEASAGIGTLRGGQMKEAADSPRTWLFSDTSRGNDIEVYVNDSAKRAGKRGLRLTTLGRIAYFFEHQGNDRRSDNAEERQQGEGEWTIWVAIQEFASAGVGNTRKVDVPTGCDMFTLRQK 516 PGL +G++ CFNHW +P EASAG GTLRGG +K+AA+ W+ +TSR ND+ +YV+ +A+R G+R TTLGRIAY FEHQGND R + Q+G GEWTIWVA++E+ +AG G RKV+ PTGCD+F LR + Sbjct: 329 PGLHNGSVTCFNHWGNSPEEASAGTGTLRGGPVKDAAEFGNKWMIQETSRANDVGLYVDTNARRFGEREQAATTLGRIAYCFEHQGNDSRHLVDGKVQEG-GEWTIWVAVEEYITAGRGQGRKVNHPTGCDVFYLRSQ 465
BLAST of mRNA_L-elsbetiae_contig19109.5635.1 vs. uniprot
Match: A0A6H5JYK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYK1_9PHAE) HSP 1 Score: 149 bits (376), Expect = 9.100e-41 Identity = 71/130 (54.62%), Postives = 90/130 (69.23%), Query Frame = 1 Query: 1 EALVDLYKSKLGCKRGAEDAACASPTCAFCWRGR-PGLTHGTIFCFNHWAEAPAEASAGIGTLRGGQMKEAADSPRTWLFSDTSRGNDIEVYVNDSAKRAGKRGLRLTTLGRIAYFFEHQGND-RRSDNA 384 E L Y LGC R A++A C+ TC+FCWR R G+ T+ FNHW +APAE SAGIGT+RGG +K+A TW+ S SRGND+E+Y+ +RAG RGL TTLG++AYFFEHQGND RR D++ Sbjct: 170 EQLQKCYDDSLGCGRTAQEAPCSRRTCSFCWRNRGQGIVRQTVVVFNHWGQAPAEVSAGIGTIRGGPVKDAGTP--TWVRSAASRGNDVEIYLKAEDQRAGNRGLGRTTLGKVAYFFEHQGNDWRRGDSS 297
BLAST of mRNA_L-elsbetiae_contig19109.5635.1 vs. uniprot
Match: A0A6H5JF97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF97_9PHAE) HSP 1 Score: 131 bits (329), Expect = 9.260e-32 Identity = 76/193 (39.38%), Postives = 102/193 (52.85%), Query Frame = 1 Query: 7 LVDLYKSKLGCKR-GAEDAACASPTCAFCWRGRP-GLTHGTIFCFNHWAEAPAEASAGIGTLRGGQMKEAADSPRTWLFSDTSRGNDIEVYVNDSAKRAGKRGLRLT-TLGRIAYFFEHQGNDRRSDNAEERQQGEGEWTIWVAIQEFASAGVGNTRKVDVPTGCDMFTLRQKMSFFPASAIRSTVHMVHSCV 576 L DLY + C R A C P C CW+ R G + N+W AP+E S G GTLRGG ++ A + R W+ G D+E+Y N A + K G T +L R+A+F EH GN + GE T+WVA+ E+ +AG+G + VD TG + R+++SFFPA AIR VHM H CV Sbjct: 638 LEDLYHTWYSCGRLHGVQAFCGKPQCPRCWKYRNVGFREQRVRFSNNWTGAPSEVSGGSGTLRGGNVQIAKTNDRQWMAES---GTDVEIYSNRDAMISNKPGPAGTCSLARVAFFAEHVGNPPLGVDTT------GEKTLWVAVAEYVTAGIGQDKFVDAATGHPIMRRRKRLSFFPARAIRRVVHMYHVCV 821
BLAST of mRNA_L-elsbetiae_contig19109.5635.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 2.910e-14 Identity = 63/194 (32.47%), Postives = 86/194 (44.33%), Query Frame = 1 Query: 4 ALVDLYKSKLGCKRGAEDAACASPTCAFCWRGRPGLTHGTIFCFNHWAEAPAEASAGIGTLRGGQMKEAAD-SPRTWLFSDTSRGNDIEVYVNDSAK-RAGKRGLRLTTLGRIAYFFEHQGNDRRSDNAEERQQGEGEWTIWVAIQEFASAGVGNTRKVDVPTGCDMFTLRQKMS--FFPASAIRSTVHMVHSC 573 AL+ YK C AC++ C CW G L TI C + + P AS G+G L+GG +K AA PR + G+++EV+ S AG+ R +L ++ YFF HQGN A T WV ++ GN R D TG LR + +PA AI VH+ H+C Sbjct: 579 ALLGGYKKFFACDMAG---ACSNIRCPNCWVG-DDLETVTIEC-SRYLRVPMAASCGVGRLKGGDVKSAAQPGPRDDWALGSGGGDNVEVHQQPSTMGEAGRVDPRDLSLVKVLYFFRHQGNPPLMGGAPPPL------TWWVLGYDYTGVRHGNDRAPDSVTGHPTLQLRGRGRPVVYPADAIHRQVHLYHAC 761
BLAST of mRNA_L-elsbetiae_contig19109.5635.1 vs. uniprot
Match: A0A6H5KNJ3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNJ3_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 1.380e-13 Identity = 61/199 (30.65%), Postives = 87/199 (43.72%), Query Frame = 1 Query: 1 EALVDLYKSKLGCKRGAEDAACASPTCAFCWRGRPGLTHGTIFCFNHWAEAPAEASAGIGTLRGGQMKEAADS-PRTWLFSDTSRGNDIEVYVN-DSAKRAGKRGLRLTTLGRIAYFFEHQGNDRRSDNAEERQQGEGEWTIWVAIQEFASAGVGNTRKVDVPTGCDMFTLRQK--MSFFPASAIRSTVHMVHSCVTSG 585 + L+ Y++ GC C+S C CW G L +I C + + AP AS G+G L+GG +K AA + PR + G+++EVY AG+ TL ++ YFF H+ N T WV E+ N R D TG LR + + +P SAI VH+ H+C SG Sbjct: 182 QTLLRAYQTYYGCGMAGP---CSSSRCPNCWDGDT-LQQASIDC-SRYIRAPMVASCGLGRLKGGDVKSAAQAGPRDEWALGSGGGDNVEVYKQLPPMPAAGRADPTDLTLVKVLYFFRHKANRPLMGGNPPPL------TWWVLGYEYTGVAHANDRVPDSITGHPTLNLRARGRPAVYPVSAIYRQVHLYHACSLSG 369
BLAST of mRNA_L-elsbetiae_contig19109.5635.1 vs. uniprot
Match: A0A6H5K0J4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J4_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 1.430e-13 Identity = 61/199 (30.65%), Postives = 87/199 (43.72%), Query Frame = 1 Query: 1 EALVDLYKSKLGCKRGAEDAACASPTCAFCWRGRPGLTHGTIFCFNHWAEAPAEASAGIGTLRGGQMKEAADS-PRTWLFSDTSRGNDIEVYVN-DSAKRAGKRGLRLTTLGRIAYFFEHQGNDRRSDNAEERQQGEGEWTIWVAIQEFASAGVGNTRKVDVPTGCDMFTLRQK--MSFFPASAIRSTVHMVHSCVTSG 585 + L+ Y++ GC C+S C CW G L +I C + + AP AS G+G L+GG +K AA + PR + G+++EVY AG+ TL ++ YFF H+ N T WV E+ N R D TG LR + + +P SAI VH+ H+C SG Sbjct: 1034 QTLLRAYQTYYGCGMAGP---CSSSRCPNCWDGDT-LQQASIDC-SRYIRAPMVASCGLGRLKGGDVKSAAQAGPRDEWALGSGGGDNVEVYKQLPPMPAAGRADPTDLTLVKVLYFFRHKANRPLMGGNPPPL------TWWVLGYEYTGVAHANDRVPDSITGHPTLNLRARGRPAVYPVSAIYGQVHLYHACSLSG 1221
BLAST of mRNA_L-elsbetiae_contig19109.5635.1 vs. uniprot
Match: A0A6H5JRJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ8_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 6.710e-13 Identity = 58/178 (32.58%), Postives = 79/178 (44.38%), Query Frame = 1 Query: 64 CASPTCAFCWRGRPGLTHGTIFCFNHWAEAPAEASAGIGTLRGGQMKEAADS-PRTWLFSDTSRGNDIEVYVND-SAKRAGKRGLRLTTLGRIAYFFEHQGNDRRSDNAEERQQGEGEWTIWVAIQEFASAGVGNTRKVDVPTGCDMFTLRQK--MSFFPASAIRSTVHMVHSCVTSG 585 C+S C CW G L +I C + + AP AS G+G L+GG +K AA + PR + G+++EVY AG TL ++ YFF H+GN T WV E+ N R D TG LR + + +P SAI VH+ H+C SG Sbjct: 5 CSSSRCPNCWDGDT-LQQASIDC-SRYIRAPMVASCGLGRLKGGDVKSAAQAGPRDEWALGSGGGDNVEVYKQLLPMPAAGGADPTDLTLVKVLYFFRHKGNRPLMGGNPPPL------TWWVLGYEYTGVAHANDRVPDSITGHPTLNLRARGRPAVYPVSAIYRQVHLYHACSLSG 174
BLAST of mRNA_L-elsbetiae_contig19109.5635.1 vs. uniprot
Match: A0A6H5KKN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN3_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 7.870e-13 Identity = 60/200 (30.00%), Postives = 89/200 (44.50%), Query Frame = 1 Query: 1 EALVDLYKSKLGCKRGAEDAACASPTCAFCWRGRPGLTHGTIFCFNHWAEAPAEASAGIGTLRGGQMKEAADS-PRTWLFSDTSRGNDIEVYVN-DSAKRAGKRGLRLTTLGRIAYFFEHQGNDRRSDNAEERQQGEGEWTIWVAI-QEFASAGVGNTRKVDVPTGCDMFTLRQK--MSFFPASAIRSTVHMVHSCVTSG 585 + L+ Y++ GC C+S C CW G L +I C + + AP AS G+G L+GG +K AA + PR + G+++EVY AG+ TL ++ YFF H+GN G +W + E+ N R D TG +R + + +P SAI VH+ H+C SG Sbjct: 51 QTLLRAYQTYYGCGMAGP---CSSSRCPNCWDGDT-LQQASIDC-SRYIRAPMVASCGLGRLKGGDVKSAAQAGPRDEWALGSGGGDNVEVYKQLPPMPAAGRADPTDLTLVKVLYFFRHKGN-------RPLMGGNPPPLMWRVLGYEYTGVAHANDRVPDSITGHPTLNVRARGRPAVYPVSAIYWPVHLYHACSLSG 238 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19109.5635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19109.5635.1 >prot_L-elsbetiae_contig19109.5635.1 ID=prot_L-elsbetiae_contig19109.5635.1|Name=mRNA_L-elsbetiae_contig19109.5635.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=200bp EALVDLYKSKLGCKRGAEDAACASPTCAFCWRGRPGLTHGTIFCFNHWAEback to top mRNA from alignment at L-elsbetiae_contig19109:521..1120+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19109.5635.1 ID=mRNA_L-elsbetiae_contig19109.5635.1|Name=mRNA_L-elsbetiae_contig19109.5635.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=600bp|location=Sequence derived from alignment at L-elsbetiae_contig19109:521..1120+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19109:521..1120+ >mRNA_L-elsbetiae_contig19109.5635.1 ID=mRNA_L-elsbetiae_contig19109.5635.1|Name=mRNA_L-elsbetiae_contig19109.5635.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1200bp|location=Sequence derived from alignment at L-elsbetiae_contig19109:521..1120+ (Laminarionema elsbetiae ELsaHSoW15)back to top |