prot_L-elsbetiae_contig191.5624.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig191.5624.1
Unique Nameprot_L-elsbetiae_contig191.5624.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length95
Homology
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BLAST of mRNA_L-elsbetiae_contig191.5624.1 vs. uniprot
Match: Q8QNC6_ESV1K (EsV-1-156 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC6_ESV1K)

HSP 1 Score: 84.3 bits (207), Expect = 2.040e-17
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 0 
Query:   16 RKVKGEAVAQKNFHSKGLAPKILGYCNFKPKKRLRKSAHERLNDLEYDDD----DIEYHPRGHLVHIIVMEEIADVIGDWL 92
            ++++GE  AQ+ FH +GLAPKI+ YC+FKPK RL   AHERLN    D        +  P G+LVH+I+MEEIA V+G WL
Sbjct:  103 KRLRGELSAQRAFHKRGLAPKIIRYCSFKPKTRLGMVAHERLNRAVQDKSVPFQTEDESPAGNLVHVIIMEEIAGVLGQWL 183
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig191.5624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNC6_ESV1K2.040e-1751.85EsV-1-156 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig191contigL-elsbetiae_contig191:4561..4845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig191.5624.1mRNA_L-elsbetiae_contig191.5624.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig191 4325..4996 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig191.5624.1 ID=prot_L-elsbetiae_contig191.5624.1|Name=mRNA_L-elsbetiae_contig191.5624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=95bp
MMAPEQYSKRRLVPRRKVKGEAVAQKNFHSKGLAPKILGYCNFKPKKRLR
KSAHERLNDLEYDDDDIEYHPRGHLVHIIVMEEIADVIGDWLHP*
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