prot_L-elsbetiae_contig19008.5595.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19008.5595.1
Unique Nameprot_L-elsbetiae_contig19008.5595.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length455
Homology
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BLAST of mRNA_L-elsbetiae_contig19008.5595.1 vs. uniprot
Match: D7FWF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWF0_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 3.220e-66
Identity = 170/341 (49.85%), Postives = 197/341 (57.77%), Query Frame = 0 
Query:  165 IVAAAEAWCGAEASSLKRDAQMATKRSWDDFENDNSGXXXXXXXXXXXXXAGV------------TTTGLGGNGCGSSVQAGPGGESPPGXXXXXXXXXXXXXXXXXXXXXXXXADCC--RPRAPTTL--PVTRMPESV-------------------EAPEVAEARAALEEARELMGVNLPSLDKGP---EADCVLCHIPRGAFLRAETGKK-LGWCHVLCALSKGLVIEDRVVKTRGFLRGDGTSNCEFCKKSSGGLIACSFEGCGIRFHPPCGKAHGCTAARGPHVHPRDWSARCPKH-----ARAAAA---ASKGPVPGAATTGP-----MPVKEMY 453
            IVAAAEAWCG EAS LKRDAQ A KRSWDDFEN  +G      XXXXXXX               T  G GG  C S+   G G ++P  XXXXXX                  A       R+P T   P  +   S                    + PEV+ ARAALEEA E +GV+LPSLDKGP   EADC+LCH+PRGA LRAE G K LGWCH LCA SKGL+IEDRVVKTRG ++GDG S C FCK++ GG+I CS + C + FHP CGK  G +A RGPH+HP  W+A CPKH     ARAAAA   A+KGP  G  ++       MPVKE+Y
Sbjct:  188 IVAAAEAWCGVEASRLKRDAQQAKKRSWDDFENGGNGSIGTAEXXXXXXXXXAVDIGTAEGARSSTARGSGGETCSSNGNLGGGLKAPXXXXXXXXNGWQRSAETPSPTPSSCAASASDLSARSPATCSPPGEQRIASXXXXXXXXXXXXXXXXXXXXDTPEVSAARAALEEAEECVGVDLPSLDKGPPDAEADCILCHVPRGALLRAERGTKGLGWCHCLCAFSKGLLIEDRVVKTRGRIKGDG-STCGFCKRTGGGIIECSEKDCKVTFHPLCGKPWGGSAVRGPHLHPDQWTAWCPKHSGGAAARAAAARGLAAKGPFMGGGSSSDGKAMVMPVKEVY 527
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BLAST of mRNA_L-elsbetiae_contig19008.5595.1 vs. uniprot
Match: A0A6H5JI95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI95_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 3.380e-63
Identity = 161/340 (47.35%), Postives = 187/340 (55.00%), Query Frame = 0 
Query:  165 IVAAAEAWCGAEASSLKRDAQMATKRSWDDFENDNSGXXXXXXXXXXXXXAGV---------------TTTGLGGNGCGSSVQAGPGGESPPGXXXXXXXXXXXXXXXXXXXXXXXXADCCRPRAPTTLPVTRMPESVEA-------------------PEVAEARAALEEARELMGVNLPSLDKGP---EADCVLCHIPRGAFLRAETGKK-LGWCHVLCALSKGLVIEDRVVKTRGFLRGDGTSNCEFCKKSSGGLIACSFEGCGIRFHPPCGKAHGCTAARGPHVHPRDWSARCPKH-----ARAAAA---ASKGPVPGAATTGP-----MPVKEMY 453
            IVAAAEAWCG EAS LKRDAQ A KRSWDDFEN  +G       XXXXXX                  T  G GG  C S+   G   ++PP                             R  A  + P  +   S  A                   PEVA ARAALEEA E +GV+LPSLDKGP   EADC+LCH+PRGA LRAE G K L WCH LCA SKGL+IEDRVVKTRG ++GDG S C FCK++ GG+I CS + C + FHP CGK  G +A RGPH+HP  W+A CPKH     ARAAAA   ++KGP  G  ++       MPVKE+Y
Sbjct:  674 IVAAAEAWCGVEASRLKRDAQQAKKRSWDDFENGGNGSIGAAEAXXXXXXXXXXXXVDRGAAEGGRSSTAQGSGGETCSSNGNLGSRFKAPPPPPNGWQRATETPSPTPSSCAASASDLMARSPATCSPPGEQRIASAPAXXXXXXXXXXXXXXXXXXXPEVAAARAALEEAEECVGVDLPSLDKGPPDAEADCILCHVPRGALLRAERGTKGLAWCHCLCAFSKGLLIEDRVVKTRGRIKGDG-STCGFCKRTGGGIIECSEKECKVTFHPLCGKPWGGSAVRGPHLHPDQWTAWCPKHSGGAAARAAAARGLSAKGPFMGGGSSSDGQAMVMPVKEVY 1012
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19008.5595.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWF0_ECTSI3.220e-6649.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JI95_9PHAE3.380e-6347.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13832zf-HC5HC2H_2coord: 320..426
e-value: 2.6E-11
score: 43.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 317..429
e-value: 1.5E-9
score: 39.9
IPR034732Extended PHD (ePHD) domainPROSITEPS51805EPHDcoord: 318..427
score: 9.707

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19008contigL-elsbetiae_contig19008:901..2786 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19008.5595.1mRNA_L-elsbetiae_contig19008.5595.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19008 901..2786 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19008.5595.1 ID=prot_L-elsbetiae_contig19008.5595.1|Name=mRNA_L-elsbetiae_contig19008.5595.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=455bp
AQKRLDAATAEAGASPSPSVKVEGAEATAHGAAVAPSSPSAATAAGAKMP
AGKRRKICPSNNPSTTEPPPHAVTASCGAAPTTAGRSFAVGAATTAKLPP
TPNGSRGSGAGGACAEKAVHPSPAEQAAASSKGESAAAAATGGSAAGSQA
LAARGREDRRGAAGIVAAAEAWCGAEASSLKRDAQMATKRSWDDFENDNS
GGGGAKAQAALADAAGVTTTGLGGNGCGSSVQAGPGGESPPGAGSGGGQQ
SQGKPPAAAAAAAASSADCCRPRAPTTLPVTRMPESVEAPEVAEARAALE
EARELMGVNLPSLDKGPEADCVLCHIPRGAFLRAETGKKLGWCHVLCALS
KGLVIEDRVVKTRGFLRGDGTSNCEFCKKSSGGLIACSFEGCGIRFHPPC
GKAHGCTAARGPHVHPRDWSARCPKHARAAAAASKGPVPGAATTGPMPVK
EMYT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR034732EPHD