mRNA_L-elsbetiae_contig1883.5521.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1883.5521.1 vs. uniprot
Match: A0A6H5L2T2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T2_9PHAE) HSP 1 Score: 350 bits (899), Expect = 2.590e-114 Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = -3 Query: 1 RVDTSADILAYMKMDVEEEDERFRFFTRREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAVLDRPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFATIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATITAPDDMNSIAALVRSYNQHAKHGVESGA 537 RVDTSADILAYMKMDVEEEDERFRFFT+REFSMIFSKRGQVGSSSVYASCSMALSLLWFATA+L RPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFA IDTHHRNINYTMLEKACE KYI+GVHIADVYAVFRAT+TAPDDMNSIAALVRSYNQHAKHGVESGA Sbjct: 164 RVDTSADILAYMKMDVEEEDERFRFFTKREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAILARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEDKYIEGVHIADVYAVFRATMTAPDDMNSIAALVRSYNQHAKHGVESGA 342
BLAST of mRNA_L-elsbetiae_contig1883.5521.1 vs. uniprot
Match: B2KWI7_ECTSI (EsV-1-213-like protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI7_ECTSI) HSP 1 Score: 340 bits (873), Expect = 2.100e-111 Identity = 167/178 (93.82%), Postives = 172/178 (96.63%), Query Frame = -3 Query: 1 VDTSADILAYMKMDVEEEDERFRFFTRREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAVLDRPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFATIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATITAPDDMNSIAALVRSYNQHAKHGVESGA 534 VDTSA+IL +MKMDVEEEDERFRFFT+REFSMIFSKRG+V SSSVYASCSMALSLLWFATAVL RPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFA IDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRAT+TAPDDMNSI ALVRSY QHAKHGVESGA Sbjct: 165 VDTSANILTFMKMDVEEEDERFRFFTKREFSMIFSKRGEVSSSSVYASCSMALSLLWFATAVLARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATMTAPDDMNSITALVRSYIQHAKHGVESGA 342
BLAST of mRNA_L-elsbetiae_contig1883.5521.1 vs. uniprot
Match: A0A6H5K0T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T8_9PHAE) HSP 1 Score: 342 bits (878), Expect = 3.520e-111 Identity = 169/179 (94.41%), Postives = 173/179 (96.65%), Query Frame = -3 Query: 1 RVDTSADILAYMKMDVEEEDERFRFFTRREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAVLDRPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFATIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATITAPDDMNSIAALVRSYNQHAKHGVESGA 537 RVDTSA ILAYMKMDVEEEDER RFFT+REFSMI+SKRGQVGSSSVYASCSMALSLLW ATA+L RPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFA IDTHHRNINYTMLEKACE KYIKGVHIADVYAVFRAT+TAPDDMNSIAALVRSYNQHAKHGVESGA Sbjct: 164 RVDTSAHILAYMKMDVEEEDERCRFFTKREFSMIYSKRGQVGSSSVYASCSMALSLLWVATAILARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEDKYIKGVHIADVYAVFRATMTAPDDMNSIAALVRSYNQHAKHGVESGA 342
BLAST of mRNA_L-elsbetiae_contig1883.5521.1 vs. uniprot
Match: B2KWI6_ECTSI (EsV-1-213-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI6_ECTSI) HSP 1 Score: 295 bits (755), Expect = 1.040e-92 Identity = 140/179 (78.21%), Postives = 162/179 (90.50%), Query Frame = -3 Query: 1 RVDTSADILAYMKMDVEEEDERFRFFTRREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAVLDRPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFATIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATITAPDDMNSIAALVRSYNQHAKHGVESGA 537 RVDT A+ILA+MKMDV+EEDER RFF RREFS++ ++RGQVGSSSVY+SCSMALSLLWFAT VL RPCCLES+ILPLSV ER+ MEQRF+CPP+ FDGPI+SF TNWKDVF I T HRNI+YT+LEKACE+KYI+GVH+ADVYA FRAT+TAP DMNSIAALV+SY +H+KHGVESGA Sbjct: 161 RVDTCANILAFMKMDVDEEDERLRFFNRREFSILVAERGQVGSSSVYSSCSMALSLLWFATTVLARPCCLESVILPLSVAERKMMEQRFRCPPECFDGPIKSFHTNWKDVFTAIGTCHRNIDYTLLEKACENKYIEGVHVADVYAAFRATMTAPGDMNSIAALVQSYKEHSKHGVESGA 339
BLAST of mRNA_L-elsbetiae_contig1883.5521.1 vs. uniprot
Match: A0A6H5K1E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E4_9PHAE) HSP 1 Score: 258 bits (659), Expect = 1.180e-79 Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = -3 Query: 139 RVDTSADILAYMKMDVEEEDERFRFFTRREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAVLDRPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFATIDTHHRNINYTMLEKACEHK 537 RVDTSA+ILA+MK+DVEEEDERFRFFT+REFSMIFSKRGQV SSSVYASCSMALSLLWFATA L RPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFA IDTHHRNINYTMLEKACEHK Sbjct: 127 RVDTSANILAFMKLDVEEEDERFRFFTKREFSMIFSKRGQVSSSSVYASCSMALSLLWFATAALARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEHK 259
BLAST of mRNA_L-elsbetiae_contig1883.5521.1 vs. uniprot
Match: A0A6H5J9C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C0_9PHAE) HSP 1 Score: 258 bits (658), Expect = 2.430e-78 Identity = 128/181 (70.72%), Postives = 148/181 (81.77%), Query Frame = -3 Query: 1 RVDTSAD--ILAYMKMDVEEEDERFRFFTRREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAVLDRPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFATIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATITAPDDMNSIAALVRSYNQHAKHGVESGA 537 R+D AD IL +M M VEEEDERFRFFT REFSMI+S+RG+VGSSSVY+SCS ALSLLWFAT VL RPCCLESIILP++V ERR MEQRF CP FFDGPI+SFQT W VFA I T HR+I+YT++E A KY++GVH++D YA FRAT+TAP D SIAALV+SY + AKHGVESGA Sbjct: 168 RIDPVADTSILVFMNMSVEEEDERFRFFTNREFSMIYSERGEVGSSSVYSSCSTALSLLWFATTVLARPCCLESIILPINVRERRRMEQRFGCPSHFFDGPIRSFQTTWGGVFAAIGTPHRSIDYTVIEFATSEKYVEGVHVSDAYAAFRATMTAPGDCASIAALVQSYRRSAKHGVESGA 348
BLAST of mRNA_L-elsbetiae_contig1883.5521.1 vs. uniprot
Match: D7FHJ1_ECTSI (EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHJ1_ECTSI) HSP 1 Score: 223 bits (567), Expect = 2.860e-67 Identity = 106/175 (60.57%), Postives = 135/175 (77.14%), Query Frame = -3 Query: 1 SADILAYMKMDVEEEDERFRFFTRREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAVLDRPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFATIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATITAPDDMNSIAALVRSYNQHAKHGVESGA 525 + ++L +MK+D+E+EDERFR F REFSM+ S+RG V SSV+ASCSMALSL+ F+T VL RPC LES ILP S ER+A+EQRFKCPP FFDG ++ QTNWKDVF +I HRNI+ TMLEK +YI+G+++AD YAV+R T++AP D SI ALV +Y H+KHGV+S A Sbjct: 26 TGNVLQFMKVDLEDEDERFRSFMGREFSMLSSERGNVNGSSVFASCSMALSLMCFSTLVLGRPCSLESAILPFSTLERQALEQRFKCPPNFFDGAVREVQTNWKDVFTSIGIAHRNIDCTMLEKFSGERYIEGLYVADAYAVYRGTMSAPGDAKSITALVNAYRDHSKHGVDSSA 200
BLAST of mRNA_L-elsbetiae_contig1883.5521.1 vs. uniprot
Match: D8LP31_ECTSI (EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP31_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.530e-57 Identity = 92/177 (51.98%), Postives = 126/177 (71.19%), Query Frame = -3 Query: 4 VDTSADILAYMKMDVEEEDERFRFFTRREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAVLDRPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFATIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATITAPDDMNSIAALVRSYNQHAKHGVESG 534 VD S IL +MKMD +++D R RFF +R+F+ I KRG+ SSSVYASCS A+ L+WFAT +L RP ES++LPL+V ERR +E+R+ CPP DG I+ ++T+W+ VF I+ HRNI Y MLE+AC+ KYI+G H+ D Y +F+AT +AP D IA L R+Y + K+G+E G Sbjct: 167 VDKSKSILQFMKMDFDDDDSRQRFFLQRDFATISGKRGETSSSSVYASCSSAIGLMWFATVILGRPTAFESVVLPLNVMERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRTYTEKTKYGIECG 343
BLAST of mRNA_L-elsbetiae_contig1883.5521.1 vs. uniprot
Match: Q8QN77_ESV1K (EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K) HSP 1 Score: 199 bits (505), Expect = 1.970e-56 Identity = 96/178 (53.93%), Postives = 124/178 (69.66%), Query Frame = -3 Query: 1 VDTSADILAYMKMDVEEEDERFRFFTRREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAVLDRPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFATIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATITAPDDMNSIAALVRSYNQHAKHGVESGA 534 VD + ++L YM +D E+ D R RFF REF+M S+ G++ +SSVY SCS ALSL++F +L RPCCLES+ILPLSVTER +EQ + CP DGPI FQTNW++VF I T HR+INY LE+A E YI G H+AD +A++ AT +AP D +IA L Y ++K GVESGA Sbjct: 160 VDMTKNVLEYMNIDFEQSDLRHRFFLGREFAMTSSEHGKMNASSVYTSCSKALSLMYFTVVILGRPCCLESVILPLSVTERSVLEQTWGCPGTHLDGPINKFQTNWREVFRAIGTPHRSINYVCLERATEESYIGGKHVADCFALYNATRSAPGDAKTIAGLANHYRLNSKIGVESGA 337
BLAST of mRNA_L-elsbetiae_contig1883.5521.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE) HSP 1 Score: 200 bits (508), Expect = 4.130e-56 Identity = 91/177 (51.41%), Postives = 125/177 (70.62%), Query Frame = -3 Query: 4 VDTSADILAYMKMDVEEEDERFRFFTRREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAVLDRPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFATIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATITAPDDMNSIAALVRSYNQHAKHGVESG 534 VD S IL +M MD +++D R RFF +R+F+ I KRG+ SSSVYASCS A+ L+WFAT +L RP ES++LPL+V ERR +E+R+ CPP DG I+ ++T+W+ VF I+ HRNI Y MLE+AC+ KYI+G H+ D Y +F+AT +AP D IA L R+Y + K+G+E G Sbjct: 167 VDKSKSILQFMNMDFDDDDSRQRFFLQRDFATISGKRGETSSSSVYASCSSAIGLMWFATVILGRPTAFESVVLPLNVMERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTEKTKYGIECG 343 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1883.5521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1883.5521.1 >prot_L-elsbetiae_contig1883.5521.1 ID=prot_L-elsbetiae_contig1883.5521.1|Name=mRNA_L-elsbetiae_contig1883.5521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp MLVVGSHQSRDAVHVIWGRNGRSKHGIDIGNVHTLNVLVFARFLEHRVVDback to top mRNA from alignment at L-elsbetiae_contig1883:9477..10015+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1883.5521.1 ID=mRNA_L-elsbetiae_contig1883.5521.1|Name=mRNA_L-elsbetiae_contig1883.5521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=539bp|location=Sequence derived from alignment at L-elsbetiae_contig1883:9477..10015+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1883:9477..10015+ >mRNA_L-elsbetiae_contig1883.5521.1 ID=mRNA_L-elsbetiae_contig1883.5521.1|Name=mRNA_L-elsbetiae_contig1883.5521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=690bp|location=Sequence derived from alignment at L-elsbetiae_contig1883:9477..10015+ (Laminarionema elsbetiae ELsaHSoW15)back to top |