mRNA_L-elsbetiae_contig1869.5465.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A6H5JQD1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQD1_9PHAE) HSP 1 Score: 541 bits (1394), Expect = 7.980e-189 Identity = 283/363 (77.96%), Postives = 315/363 (86.78%), Query Frame = 1 Query: 10 SGLSLSEDALASIADLDDHPVEDNDAARADRMLAALESIPEDERQGLGLDVGDLRSKPLSERLVELEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDSQPSALALLLENATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMYDAEGSDSRVKTKTLTLMSDLLQEAARGSPAAVLATVPVGSSSSSGGVWCRRVDEALQQAPSPGALEKAIEAVESFTHSCRIQFVELETKQRIQGLAQQCRTSPPAGLEEVGAEFQQELTQKLEDCALALR 1098 S LS +ALASIADLDDHP+EDNDAARADRMLAALESIPE ERQG+ LD LRSKPL+ERL EL+ LW VRQQELREAYDAMPKVNELL +RI++L +A AT+ A+ GAL DLEDLLSDIDMARDFHTIGGFP LASMLR S+PE VRE+AAWA+GTAVKNEP HQLWVLE GPDSQPS LALLLENA A TPTLRSK+VYALSACL NNG VQL+FGS GE +LSAMYDA+GSD RV+ KTLTLMSDLLQEAARGSPAAVLAT+PVGS++SSGG WCRRVDEALQ A SP ALEKAIEAV+SFT SCR QF +L+TK+R++GLAQQCRTSPP G E E+ +ELTQKLE+CA+ALR Sbjct: 39 SPFDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDAEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRIKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEEYHKELTQKLEECAVALR 401
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A835Z7K3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K3_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.180e-31 Identity = 103/309 (33.33%), Postives = 148/309 (47.90%), Query Frame = 1 Query: 43 SIADLDDHPVEDNDAARADRMLAALESIPEDERQGLGLDVGDLRSKPLSERLVELEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGP----DSQPS-----------------------------------------------------ALALLLENATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLL-----SAMYDAEGSDSRVKTKTLTLMSDLLQEAA 783 SI +DDHPV+D AR RML AL +P +E++ + LD + + SER L+ LW RQ EL+E Y MP ++L I +L+ ++ + ++ AL+DLED LSD+DMARDFHT+GG+ L ++L + +VRE AAW IGTAVKN W LE GP D+ S A+ LLE A+ L+ K +YAL++ LR+N Q F + G L +A D + + TK +TL+SD++ + A Sbjct: 98 SIRGIDDHPVQDTPEARTQRMLEALLELPREEQERMQLDA--ILALDPSERPPALQALWERRQAELKEIYAGMPTPAKILGSLIAILRSEASGDAVLLDALLDLEDHLSDVDMARDFHTLGGWHPLQALLHAERAPAVREHAAWVIGTAVKNVIEFHGWALETGPAAAADASESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVAGAGDGLNAIDRLLECVADARHAGLQGKALYALASALRHNARAQAHFVTTGGLDALRNAAATAADDGGAAARGLLTKAITLVSDIVADEA 404
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7R9U9J5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9J5_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.460e-28 Identity = 99/298 (33.22%), Postives = 150/298 (50.34%), Query Frame = 1 Query: 61 DHPVEDNDAARADRMLAALESIPEDERQGLGLDVGDLRSKPLSERLVELEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLE----AGPDSQPSALALLLENA--TTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMYDAEGSDSRVKTKTLTLMSDLLQEAARGSPAAVLATVPVGSSSSSGGV----WCRRVDEALQQAPSPGALEKAIEAV 924 + P DA R + M +L +P+ E G+ +L + E ++ +W RQQ+LREA ++M + +RI VL A ++E+ V+ L+ LED L DIDMARDFHT+GG+PAL +L DS E VR AA +G V+N P Q WV E + D + + + LL + ++A T +SK + ALS L N+ F L G L A+ D + + R+ + + ++SDL EAA + + GG+ WCRR ++ A G ++ EAV Sbjct: 89 EEPASAVDAGR-EMMKESLLKLPDAELARYGVTHAELSTPGAWED--RIDGIWQKRQQDLREAIESMGSHVNIFLERIMVLSAADSSEEDVMKVLLQLEDDLMDIDMARDFHTVGGWPALTGLLADSHAEDVRCQAALVVGNTVRNTPEFQAWVSEVPMGSAADVEEATMMHLLVSMMNSSASTAKEQSKALSALSGALYNHVENLQLFADLDGSAKLLALLD-DAVEDRLSLRAIRIVSDLAFEAAESGDEELKGLL--------GGIFDARWCRRTEDLASAAKGAGTDDRLSEAV 374
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: W7TQS8_9STRA (Armadillo-like helical n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQS8_9STRA) HSP 1 Score: 116 bits (291), Expect = 3.190e-24 Identity = 104/282 (36.88%), Postives = 142/282 (50.35%), Query Frame = 1 Query: 88 ARADRMLAALESIPEDERQGLGLDVGDLRSKP-----LSERLVE-------------LEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLR-DSQPESVREI---AAWAIGTAVKNEPGHQLWVLEAGPDSQPSALALLL----ENATTA-----KTPTLRSKIVYALSACLRNNGGVQ---LEFGSLR--GETLLSAMYDAEGSDSRVK-------TKTLTLMSDLLQEAARGSPAAV 804 +R ML L +P ER +G+D L S+P L E +VE +E LWA RQ L +AY+ M K E L + I VL++ E+ V+ AL++LED LSD+DMA+DF+T+GG+P L S L + E RE+ AAW +G AVKN+ Q WVLE G + SAL LL E T A + L K VYA+++ R N VQ +E G L G L S++ + GS + K K + DL EA + AA+ Sbjct: 174 SRRGTMLKVLSGLPPQERASMGID-SLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEGG--EEEVMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAAAL 452
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7S2RJU1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJU1_9STRA) HSP 1 Score: 105 bits (263), Expect = 5.410e-21 Identity = 74/206 (35.92%), Postives = 110/206 (53.40%), Query Frame = 1 Query: 205 LEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHT-IGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDSQP----------SALALLLENATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRG----ETLLSAMYDAEGSDSRVKTKTLTLMSDLLQE 777 L+ LW RQ+EL+ A +AM + + L+ I ++ S E++V AL DLE+ LSD+DMARD H +GG+P L +L Q +R AA IGTA+KNEP Q W+LE+ +S S+L +LE T + + +YAL++ LR+N Q F L G + LL D + + +K L+ D+L+E Sbjct: 121 LKVLWEQRQEELKAAMEAMQEAADTLSSIIRQIR--SGDEESVEAALADLEEHLSDVDMARDLHNALGGWPPLVRLLSSDQSPRIRAGAALVIGTAIKNEPVFQSWILESAAESVDVNPQQNETALSSLLGMLEEQGTGDVQVMHRRSMYALASALRHNLRNQAAFMELGGLERLQALLVKSCDGGLENPALVSKLAALVFDVLEE 324
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7S1UMA0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMA0_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.320e-18 Identity = 76/242 (31.40%), Postives = 130/242 (53.72%), Query Frame = 1 Query: 115 LESIPEDERQGLGLDVGDLRSKPLSERLVELEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWV-------LE-----AGPDS--QPSALALLLEN-ATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMY----DAEGSDSRVKTKTLTLMSDLLQEAA 783 L +P+ E G+ +L+++ E V ++W RQ +L+ A +++ + + T + VLQD +A+ + ++ L + + L D+D+A DFH++GG+P +A++L + PE VR AA I +V+N P Q WV LE AG D + +AL LL + ++++ TP + K ++ALSA L N+ +F L G LSA+ A DS++ + + + +DL EAA Sbjct: 172 LLGLPDSELSRYGISSAELQTEGAWEDRVA--EVWRKRQVDLKAAMESVADTHSIFTGYLGVLQDPAASAEELVAMLDVVAEQLMDVDLANDFHSMGGWPIVAALLAEEHPEGVRAAAAAVIADSVRNVPEFQGWVGVDKLGRLEVVGDDAGGDGSGEVTALDLLTDMFSSSSSTPKEQQKALFALSAALYNHPANLDKFLDLGGAAKLSAVLAPPEGAPKQDSKLIQRAINIAADLAFEAA 411
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7S2FHY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHY2_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.640e-18 Identity = 93/290 (32.07%), Postives = 133/290 (45.86%), Query Frame = 1 Query: 103 MLAALESIPEDERQGLGLDVGDLRSKPLSERLVE--LEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQDA----SATEDAVIGALVDLEDLLSDIDMARDFH-TIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDS------------QPSALALLLE-------------------NATTAKTPTL-----------RSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMYDAEG----SDS-----------RVKTKTLTLMSDLLQEA 780 M+ L ++P E+ +G +SK E +E L LW VRQ EL EA A + + L I+ L+ SA ++ V+ AL LED LSD+DMARDFH +GG+P+L ++L +Q VR AA +GTAVKN+ Q W+LE S + +ALALL + T PTL R K +YA+++ +R N Q F SL G + L DAE SD +++ K T+++D + EA Sbjct: 52 MIRTLSALPVVEQDRIGFTALMDKSKASGEEALEADLRSLWEVRQVELEEAMAATEESADFLAALIKTLKSHVDSNSADDETVLDALNGLEDHLSDMDMARDFHDALGGWPSLTNLLLPTQSLQVRAAAALVMGTAVKNQDEFQGWILEPVALSLSTDTTSEEHMHEEAALALLTHMLVKGCTXXXXXXXXGTTTSVTLCNEPTLEESDPVGALAMRKKALYAIASGIRQNPHTQSLFLSLDGLSRLEHAADAEAEFAASDKHKKRPDHSSLWQLRLKLATMLADWITEA 341
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7S3M316_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M316_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.320e-16 Identity = 60/138 (43.48%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 295 EVLQDASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDSQP-------SALALLLENATTAKTPT---------LRSKIVYALSACLRNNGGVQ 660 E Q A T D + L LE LL D+D ARDFHTIGG+P L S L+ SQP VR +AA A+GTA+KN +QLW LE+ S S L LL+E T++ L+ + +YALSA +R N VQ Sbjct: 199 ETKQVADLTTDDKVYLLRQLESLLDDVDNARDFHTIGGWPTLLSHLKASQPLQVRSVAALAVGTAIKNTYDYQLWTLESPASSTTDSGALVVSGLDLLIEALGTSENTAEEIASDRFELQKRALYALSAAMRGNMDVQ 336
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A6G0XBA7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBA7_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.640e-15 Identity = 74/232 (31.90%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 103 MLAALESIPEDERQGLGLDVGDLRSKPLSERL-VELEKLWAVRQQELREAYDAMPKVNELLTKRIEVLQ-----DASATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDSQP---SALALLLENATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMYDAEGSDSRVKTKTLTLMSDLL 771 + AL +PE G+++ + K E+ + KLWA RQ+EL+EA ++ + + I+ L DA E V+ AL LE + D+D A+DF+T+GG A L S VR +AAW +G+AVK+ Q W L+AG + P ++L+++ A ++ K++YALSA ++ N Q F G +LS + A SD+ ++ K + L LL Sbjct: 134 LYNALAQLPEPPEMD-GMNIHEAYGKLTKEQFSAYIAKLWAKRQEELKEATASIRDEAKYMQGLIDTLVTPSSGDADIHEANVVDALQHLEWEVQDLDKAKDFNTMGGLEATVQYLNASSYR-VRTMAAWVVGSAVKHYDQAQEWALQAG--AMPLILNSLSIVPNEEDRASVLAMQKKMLYALSALVQANTKAQSLFARNDGVVILSNLLKA--SDTPLQHKIIVLAQHLL 359
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Match: A0A7S0J9D3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J9D3_9EUKA) HSP 1 Score: 88.2 bits (217), Expect = 3.670e-15 Identity = 68/196 (34.69%), Postives = 103/196 (52.55%), Query Frame = 1 Query: 217 WAVRQQELREAYDAMPKVNELLTKRIEVLQDA-------SATEDAVIGALVDLEDLLSDIDMARDFHTIGGFPALASMLRDSQPESVREIAAWAIGTAVKNEPGHQLWVLEAGPDSQPSALALLLENATTAKTPTLRSKIVYALSACLRNNGGVQLEFGSLRGETLLSAMYDAEGSDSRVKTKTLTLMSDLLQEAA 783 +A R++EL +AM ++++++DA S D AL L++L+ D+D ARDF TIGGF + +L PE V AW +GTAV+N+ QL +LE +A LL+ +R+K++YA+S LRN QL+F +G ++L M A S R+ K L L++DLL E+A Sbjct: 129 FAARRKELSTVAEAM------FANQVDLMRDAMHAALNRSLAADVREEALFALQELVEDLDNARDFMTIGGFKQVMELLGSDTPELVAA-TAWVVGTAVQNQRELQLHMLEL------ELMAPLLQLLHDHSAIDVRAKVLYAVSGLLRNCPEAQLDFRRRQGVSVL-VMTLARDSSPRLMRKALVLLTDLLSESA 310 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1869.5465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1869.5465.1 >prot_L-elsbetiae_contig1869.5465.1 ID=prot_L-elsbetiae_contig1869.5465.1|Name=mRNA_L-elsbetiae_contig1869.5465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=333bp MLAALESIPEDERQGLGLDVGDLRSKPLSERLVELEKLWAVRQQELREAYback to top mRNA from alignment at L-elsbetiae_contig1869:6601..9537+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1869.5465.1 ID=mRNA_L-elsbetiae_contig1869.5465.1|Name=mRNA_L-elsbetiae_contig1869.5465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2937bp|location=Sequence derived from alignment at L-elsbetiae_contig1869:6601..9537+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1869:6601..9537+ >mRNA_L-elsbetiae_contig1869.5465.1 ID=mRNA_L-elsbetiae_contig1869.5465.1|Name=mRNA_L-elsbetiae_contig1869.5465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1998bp|location=Sequence derived from alignment at L-elsbetiae_contig1869:6601..9537+ (Laminarionema elsbetiae ELsaHSoW15)back to top |