prot_L-elsbetiae_contig1867.5459.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1867.5459.1
Unique Nameprot_L-elsbetiae_contig1867.5459.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length607
Homology
BLAST of mRNA_L-elsbetiae_contig1867.5459.1 vs. uniprot
Match: D7G7K2_ECTSI (Transferase, transferring pentosyl groups, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K2_ECTSI)

HSP 1 Score: 508 bits (1308), Expect = 8.330e-172
Identity = 323/566 (57.07%), Postives = 360/566 (63.60%), Query Frame = 0
Query:   53 VPGWIEGLGHARGPLAKRLKSFLKKPLRAVWLNPESRLVEGMIPACCAADLSFTPVICVSASKVITPERHREHHSWTYLQGAGDDEEHWSCGITPEQFWANAERLIGLANGGDRGAFEGATAALIARTKKAASAXXXXXXXXXXAGFKGSXXXXXXXXXXTRRAEGRRHRGVEEPWQPGGPDLHAVLGATGLVVGSLAYAASNWAPQGEHCSLLNLSDQAFPERLLASSTGPNRHYLHIPLKEGKKANPPRYWQAEVFPAALAFIASAVGG--------APAAQQSAASVGASGDLDGSVVVAAEGATQAEGAARAGER-LPSRAEKTASSXXXXXXXXXXXXXXXXXXXXLPSAQGVPSEQATAQQQXXXXXXXXXXXXXPRRPEQGVVGATGA--TPGKCLVVCPTGAEASVIVCLCALVAFFSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSPQSLADVETHGATADDGETGRYLGGGSFSVLRRWPTAAGVVTKAQLRWRFLLLQQECPWARPPRRLMQELNEFFMTPGEHSWWTLSDR 607
            +PGWI+GLG+AR  L++RL+SFLKKPLRAVWL+PESRLVEGM+PAC AADLSFTPVICVSASKVITPERHREHHSWTYLQGAGDDEEHWS GITPEQFWAN ERL+GLA GGDRGAFEG  AALI R KK  ++          +G    XXXXXXXXXX              PWQPGGP++HAVLGATGLVVGS+ YAA NWA  G  CSLLNLSD+AFPE L+   TGP R YLH+PLK GKKANPPRYWQ  VFPAAL FIASAVG           A  QSAA V   G+  G +V   EGA   E AA + +R LPS                            L  A G+ S  A A  +               + E+G  G      + GKCLVVC TGA+ASV+VCLCALVAFF P                                    XXXXXXXXX    SS  +L   ET     D G++G +LGGG FSVLRR  +AAGVVTK+QLRWRFLL+QQECPWARPPRR MQELNE+FMTPGEHSWWTLSDR
Sbjct:    1 MPGWIQGLGNAREALSERLRSFLKKPLRAVWLSPESRLVEGMLPACSAADLSFTPVICVSASKVITPERHREHHSWTYLQGAGDDEEHWSSGITPEQFWANCERLMGLAKGGDRGAFEGVVAALITRNKKMNASSPCAGGTESRSGSGAXXXXXXXXXXXXXXXXXXXXXXXXXPWQPGGPEVHAVLGATGLVVGSVVYAAGNWASHGTDCSLLNLSDEAFPEELVERLTGPTRRYLHVPLKGGKKANPPRYWQRTVFPAALVFIASAVGDLRLPTARKGMATDQSAAVV--HGEATGPLVH--EGAHLGEEAAASPDRSLPSYCGGKVGETSAVDAPDPTQ---------LEGAGGI-SSPAEADTRAIATSSAQPRLRQQWQAERGGAGVMPGPVSAGKCLVVCATGADASVVVCLCALVAFFPP-----------------------GPQASTNTPSGNRXXXXXXXXXLPSPSSRHALVADET-----DGGDSGLWLGGGRFSVLRR--SAAGVVTKSQLRWRFLLMQQECPWARPPRRSMQELNEYFMTPGEHSWWTLSDR 522          
BLAST of mRNA_L-elsbetiae_contig1867.5459.1 vs. uniprot
Match: A0A6H5KM30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM30_9PHAE)

HSP 1 Score: 506 bits (1304), Expect = 1.070e-168
Identity = 313/616 (50.81%), Postives = 354/616 (57.47%), Query Frame = 0
Query:   31 WDSALHTPRWLSASEASQIEERVPGWIEGLGHARGPLAKRLKSFLKKPLRAVWLNPESRLVEGMIPACCAADLSFTPVICVSASKVITPERHREHHSWTYLQGAGDDEEHWSCGITPEQFWANAERLIGLANGGDRGAFEGATAALIARTKKAASAXXXXXXXXXXAGFKGSXXXXXXXXXXTRRAEGRRHRGVEEPWQPGGPDLHAVLGATGLVVGSLAYAASNWAPQGEHCSLLNL--SDQ-AFPERLLASSTGPNRHY-----------------------LHIPLKEGKKANPPRYWQAEVFPAALAFIASAVGGA--PAAQQSAASVGASGDLDGSVVVAAEGATQAEGAARAGERLPSRAEKTASSXXXXXXXXXXXXXXXXXXXXLPS------AQGVPSEQATAQQQXXXXXXXXXXXXXPRRPEQGVVGAT--GATPGKCLVVCPTGAEASVIVCLCALVAFFSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSPQSLADVETHGATADD---GETGRYLGGGSFSVLRRWPTAAGVVTKAQLRWRFLLLQQECPWARPPRRLMQELNEFFMTPGEHSWWTLSDR 607
            WD+ALHTPRWLSASEASQIEER+PGWI+GLG+A+  L++RL+SFLKKPLRAVWL+PESRLVE M+PAC AADLSFTPVICVSASKVI PERHREHHSW YLQGAGDDEEHWS GITPEQFWAN+ERLIGLA  GDRGAFEG  AALI R KK  ++          +G   +              E  RH G EEPWQPGGP++HAVLGATGLVVGS+AYAA NWA  G  CSLLNL  SD+ A P R      G N                          LH     GKKANPPRYWQ  VFPAAL FIASAVG    P A++     G + D   +V+        AE     G   P   E+ A+S                     P       A+G+ S  A A  +               + ++G  G T    T GKCLVVCPTGA+ASV+VCLCALVAFF P                                                    Q L+    H   AD+   G +G +LGGG FSVL R  TAAGVVTK+QLRWRFLL+QQECPWA PPRR MQELNE+FMTPGEHSWWTLSDR
Sbjct:  131 WDTALHTPRWLSASEASQIEERMPGWIQGLGNAKEALSERLRSFLKKPLRAVWLSPESRLVERMLPACSAADLSFTPVICVSASKVIAPERHREHHSWIYLQGAGDDEEHWSSGITPEQFWANSERLIGLAKRGDRGAFEGVIAALITRNKKMNASSPCAGGTESRSGSGAARSEETPTGGGPSSTE--RHDGGEEPWQPGGPEVHAVLGATGLVVGSIAYAARNWASHGTDCSLLNLRSSDRRAAPLRAGCGGKGTNGRLCSCPGSPWRVMVTVPEIVLIYRPLHSFRTPGKKANPPRYWQKTVFPAALVFIASAVGDLRLPPARK-----GMATDQSAAVIHVQRHGEAAEPFVHEG---PHVGEEAAASPDRNLPSCCGGKVGETSAVDTPDPARLEGAEGI-SSPAEADTRAIATSSAQPRLRQQCQAKRGGAGVTMGPVTAGKCLVVCPTGADASVVVCLCALVAFFPP--------------------------------GPQANTNTPSGNQNQQPQQQQLLSPSSRHALVADEADGGNSGLWLGGGGFSVLPR--TAAGVVTKSQLRWRFLLMQQECPWAHPPRRSMQELNEYFMTPGEHSWWTLSDR 701          
BLAST of mRNA_L-elsbetiae_contig1867.5459.1 vs. uniprot
Match: A0A7S1U7M9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7M9_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.620e-21
Identity = 102/303 (33.66%), Postives = 126/303 (41.58%), Query Frame = 0
Query:   33 SALHTPRWLSASEASQIEERVPGWIEGLGHARGPLAKR--LKSFLKKPLRAVWLNPESRLVEGMIPACCAADLSFTPVICVSASKVITPERHRE---HHSWTYLQGAGDDEEHWSC--GITPEQFWANAERLIGLANGGDRGAFEGATAALIARTKKAASAXXXXXXXXXXAGFKGSXXXXXXXXXXTRRAEGRRHRGVEEPWQPGGPDLHAVLGATGLVVGSLAYAASNWAPQGEHCSLLNLSDQAFPERLLASSTGPNRHYLHIPLKEGKKANPPRYWQAEVFPAALA-FIASAVGGAPAA 327
            +AL  P WL  S   QI  RVPG+I  LG A G  A R  L   L KPLR VW++ +   V    PA     L FTPV+CVSAS+    E         SWTY+ GAGDDEEHW+   GI   QFW +A+ L+G+A   +      A AAL     K A            AG                RA   RH G                G  G   G          P  +  +L+       P +  A   G       + L+ G++A+P  YWQ  VFPAAL  F A+   GA  A
Sbjct:    4 AALCLPPWLPPSFRDQIAARVPGFIAALG-AEGSAAVRASLGGVLTKPLRCVWVSGDDDFVAEARPAAEPLGLVFTPVVCVSASRPSRVEAEAAGIGRRSWTYIPGAGDDEEHWATPVGIDAAQFWRHADALLGVAAQRNEDDLLSAIAAL--PKPKEAEGGAGAPTGGERAGVPFGEHIFEVASTEELRARLARHGGE---------------GVAGFYAG----------PSEDLAALV-------PAQAPALLGG-------VALEAGRRAHPGDYWQRVVFPAALRHFHAARAAGAAGA 264          
BLAST of mRNA_L-elsbetiae_contig1867.5459.1 vs. uniprot
Match: UPI00103600AD (tRNA A64-2'-O-ribosylphosphate transferase isoform X2 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI00103600AD)

HSP 1 Score: 105 bits (263), Expect = 1.280e-20
Identity = 56/132 (42.42%), Postives = 79/132 (59.85%), Query Frame = 0
Query:   31 WDSALHTPRWLSASEASQIEERVPGWIEGLGHARGPLAKRLKSFLKKPLRAVWLNPESRLVEGMIPACCAADLSFTPVICVSASKVITPERHRE--HHSWTYLQGAGDDEEHWSCGITPEQFWANAERLIGL 160
            WD +LH P W+S +E + IE+R+ GW E L  +   +A  L S LKKPLR +W++ ++ +    +P   + D  FTP+I VSAS      +HR     SW Y+ GAGDDEE W+ G++P  FW +A  LI L
Sbjct:   92 WDCSLHLPLWVSGTERASIEDRLEGWTEQLETSGADIAS-LASSLKKPLRPLWISQKTVIWLNEVPEYNSWD--FTPIILVSASSSSGNFQHRSTSEFSWNYISGAGDDEESWARGLSPNLFWNHAYDLINL 220          
BLAST of mRNA_L-elsbetiae_contig1867.5459.1 vs. uniprot
Match: A0A0D2RSV1_GOSRA (Rit1_C domain-containing protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2RSV1_GOSRA)

HSP 1 Score: 102 bits (255), Expect = 1.630e-20
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 0
Query:   31 WDSALHTPRWLSASEASQIEERVPGWIEGLGHARGPLAKRLKSFLKKPLRAVWLNPESRLVEGMIPACCAADLSFTPVICVSASKV--ITPERHREHHSWTYLQGAGDDEEHWSCGITPEQFWANAERLI 158
            WD +LH P W+S +E + IE+R+ GW + L  +   +A  L S LKKPLR +W++ ++ +    +P   + D  FTP+I VSAS    +T  R     SW Y+ GAGDDEE W+ G++P  FW +A  LI
Sbjct:   85 WDCSLHLPLWVSETEKAAIEDRLEGWTKDLETSGADIAI-LASCLKKPLRPLWISQKTVIWINEVPDYDSWD--FTPIILVSASSTSGVTQHRTTSEFSWNYIPGAGDDEESWARGLSPNLFWNHAYDLI 211          
BLAST of mRNA_L-elsbetiae_contig1867.5459.1 vs. uniprot
Match: A0A0D2RSU6_GOSRA (Rit1_C domain-containing protein n=6 Tax=Gossypium TaxID=3633 RepID=A0A0D2RSU6_GOSRA)

HSP 1 Score: 102 bits (255), Expect = 1.980e-20
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 0
Query:   31 WDSALHTPRWLSASEASQIEERVPGWIEGLGHARGPLAKRLKSFLKKPLRAVWLNPESRLVEGMIPACCAADLSFTPVICVSASKV--ITPERHREHHSWTYLQGAGDDEEHWSCGITPEQFWANAERLI 158
            WD +LH P W+S +E + IE+R+ GW + L  +   +A  L S LKKPLR +W++ ++ +    +P   + D  FTP+I VSAS    +T  R     SW Y+ GAGDDEE W+ G++P  FW +A  LI
Sbjct:   33 WDCSLHLPLWVSETEKAAIEDRLEGWTKDLETSGADIAI-LASCLKKPLRPLWISQKTVIWINEVPDYDSWD--FTPIILVSASSTSGVTQHRTTSEFSWNYIPGAGDDEESWARGLSPNLFWNHAYDLI 159          
BLAST of mRNA_L-elsbetiae_contig1867.5459.1 vs. uniprot
Match: A0A0G4AMV2_9ROSI (Initiator tRNA phosphoribosyl transferase family protein n=13 Tax=Pelargonium TaxID=4030 RepID=A0A0G4AMV2_9ROSI)

HSP 1 Score: 105 bits (263), Expect = 2.290e-20
Identity = 56/130 (43.08%), Postives = 78/130 (60.00%), Query Frame = 0
Query:   31 WDSALHTPRWLSASEASQIEERVPGWIEGLGHARGPLAKRLKSFLKKPLRAVWLNPESRLVEGMIPACCAADLSFTPVICVSASKVITPERHR--EHHSWTYLQGAGDDEEHWSCGITPEQFWANAERLI 158
            WDS+LH P W+S +E + IEER+ GW + L  A G     L S LKKPLR +W++ ++ +    +P   + D  FTP+I VSAS      +HR     SW Y+ GAGDDEE W+ G++P+ FW N   +I
Sbjct:  172 WDSSLHLPLWVSKTERASIEERLEGWTKEL-EASGADIASLASCLKKPLRPLWISQKTVIWLNEVPDHDSWD--FTPIILVSASSSTGVIQHRTTSEFSWNYIPGAGDDEESWARGLSPDLFWKNVYDII 298          
BLAST of mRNA_L-elsbetiae_contig1867.5459.1 vs. uniprot
Match: A0A0D2TI53_GOSRA (Rit1_C domain-containing protein n=9 Tax=Gossypium TaxID=3633 RepID=A0A0D2TI53_GOSRA)

HSP 1 Score: 102 bits (255), Expect = 3.060e-20
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 0
Query:   31 WDSALHTPRWLSASEASQIEERVPGWIEGLGHARGPLAKRLKSFLKKPLRAVWLNPESRLVEGMIPACCAADLSFTPVICVSASKV--ITPERHREHHSWTYLQGAGDDEEHWSCGITPEQFWANAERLI 158
            WD +LH P W+S +E + IE+R+ GW + L  +   +A  L S LKKPLR +W++ ++ +    +P   + D  FTP+I VSAS    +T  R     SW Y+ GAGDDEE W+ G++P  FW +A  LI
Sbjct:   85 WDCSLHLPLWVSETEKAAIEDRLEGWTKDLETSGADIAI-LASCLKKPLRPLWISQKTVIWINEVPDYDSWD--FTPIILVSASSTSGVTQHRTTSEFSWNYIPGAGDDEESWARGLSPNLFWNHAYDLI 211          
BLAST of mRNA_L-elsbetiae_contig1867.5459.1 vs. uniprot
Match: A0A4S4EFT6_CAMSI (Uncharacterized protein n=3 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4EFT6_CAMSI)

HSP 1 Score: 105 bits (263), Expect = 3.340e-20
Identity = 56/132 (42.42%), Postives = 79/132 (59.85%), Query Frame = 0
Query:   31 WDSALHTPRWLSASEASQIEERVPGWIEGLGHARGPLAKRLKSFLKKPLRAVWLNPESRLVEGMIPACCAADLSFTPVICVSASKVITPERHRE--HHSWTYLQGAGDDEEHWSCGITPEQFWANAERLIGL 160
            WD +LH P W+S +E + IE+R+ GW E L  +   +A  L S LKKPLR +W++ ++ +    +P   + D  FTP+I VSAS      +HR     SW Y+ GAGDDEE W+ G++P  FW +A  LI L
Sbjct:  166 WDCSLHLPLWVSGTERASIEDRLEGWTEQLETSGADIAS-LASSLKKPLRPLWISQKTVIWLNEVPEYNSWD--FTPIILVSASSSSGNFQHRSTSEFSWNYISGAGDDEESWARGLSPNLFWNHAYDLINL 294          
BLAST of mRNA_L-elsbetiae_contig1867.5459.1 vs. uniprot
Match: A0A061GLF0_THECC (Initiator tRNA phosphoribosyl transferase family protein isoform 4 n=2 Tax=Theobroma cacao TaxID=3641 RepID=A0A061GLF0_THECC)

HSP 1 Score: 103 bits (258), Expect = 3.440e-20
Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = 0
Query:   31 WDSALHTPRWLSASEASQIEERVPGWIEGLGHARGPLAKRLKSFLKKPLRAVWLNPESRLVEGMIPACCAADLSFTPVICVSASKV--ITPERHREHHSWTYLQGAGDDEEHWSCGITPEQFWANAERLI 158
            WD +LH P W+S +E + IE+R+ GW + L +A G     L S LKKPLR +W++ ++ +    +P   + D  FTP+I VSAS    +T  R     SW Y+ GAGDDEE W+ G++P  FW +A  LI
Sbjct:  162 WDCSLHLPLWVSGTEKAAIEDRLEGWTKDL-NASGADIAALASCLKKPLRPLWISQKTVIWINEVPDHDSWD--FTPIILVSASSSTGVTQHRTTSEFSWNYIPGAGDDEESWARGLSPNLFWNHAYDLI 288          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1867.5459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7K2_ECTSI8.330e-17257.07Transferase, transferring pentosyl groups, putativ... [more]
A0A6H5KM30_9PHAE1.070e-16850.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1U7M9_9STRA1.620e-2133.66Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
UPI00103600AD1.280e-2042.42tRNA A64-2'-O-ribosylphosphate transferase isoform... [more]
A0A0D2RSV1_GOSRA1.630e-2041.54Rit1_C domain-containing protein n=1 Tax=Gossypium... [more]
A0A0D2RSU6_GOSRA1.980e-2041.54Rit1_C domain-containing protein n=6 Tax=Gossypium... [more]
A0A0G4AMV2_9ROSI2.290e-2043.08Initiator tRNA phosphoribosyl transferase family p... [more]
A0A0D2TI53_GOSRA3.060e-2041.54Rit1_C domain-containing protein n=9 Tax=Gossypium... [more]
A0A4S4EFT6_CAMSI3.340e-2042.42Uncharacterized protein n=3 Tax=Camellia sinensis ... [more]
A0A061GLF0_THECC3.440e-2042.31Initiator tRNA phosphoribosyl transferase family p... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 403..423
IPR033449Rit1, N-terminal domainPFAMPF17184Rit1_Ccoord: 32..158
e-value: 2.5E-26
score: 92.8
IPR007306tRNA A64-2'-O-ribosylphosphate transferasePANTHERPTHR31811FAMILY NOT NAMEDcoord: 8..596

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1867contigL-elsbetiae_contig1867:9820..19589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1867.5459.1mRNA_L-elsbetiae_contig1867.5459.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1867 9820..21436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1867.5459.1 ID=prot_L-elsbetiae_contig1867.5459.1|Name=mRNA_L-elsbetiae_contig1867.5459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=607bp
MAAAARAAAGAAKDSSSSSSSSSGGGGGGAWDSALHTPRWLSASEASQIE
ERVPGWIEGLGHARGPLAKRLKSFLKKPLRAVWLNPESRLVEGMIPACCA
ADLSFTPVICVSASKVITPERHREHHSWTYLQGAGDDEEHWSCGITPEQF
WANAERLIGLANGGDRGAFEGATAALIARTKKAASAPAPATATAPAAGFK
GSSSGGGGGGGGTRRAEGRRHRGVEEPWQPGGPDLHAVLGATGLVVGSLA
YAASNWAPQGEHCSLLNLSDQAFPERLLASSTGPNRHYLHIPLKEGKKAN
PPRYWQAEVFPAALAFIASAVGGAPAAQQSAASVGASGDLDGSVVVAAEG
ATQAEGAARAGERLPSRAEKTASSSSAAAAAAAAAALEIPEPAPLPSAQG
VPSEQATAQQQQQQQQQQQQQQQQPRRPEQGVVGATGATPGKCLVVCPTG
AEASVIVCLCALVAFFSPPPPPPPPPPPPPPPPPPPPPPPPPPPATGTTS
HTASADGDQPQPRPSPTSSPQSLADVETHGATADDGETGRYLGGGSFSVL
RRWPTAAGVVTKAQLRWRFLLLQQECPWARPPRRLMQELNEFFMTPGEHS
WWTLSDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033449Rit1_N
IPR007306Rit1