mRNA_L-elsbetiae_contig18525.5390.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18525.5390.1 vs. uniprot
Match: D7G6C9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6C9_ECTSI) HSP 1 Score: 300 bits (767), Expect = 1.340e-95 Identity = 142/154 (92.21%), Postives = 151/154 (98.05%), Query Frame = 1 Query: 1 VQCVLYFRMKDSTARAMENLETASEGVQLWVTYCERVGVDDDFHGRFKCIAVIANSESLGLPSFVTKYNGKPVLINRSGHWVKGENYIENTINVHRFSFIAKKSLHALKGLFKDMVLHLGFTIEGRATDELPESLLACSTLHYPMVERAVEFEV 462 VQCV+YFRMK+STARAMENL TASEGV+LWVTYC+RVGVDDDF GRFKCIAVIANSESLGLPSF+TKYNGKPVLINRSGHWVKGENYIENTINVHRFSFIAKKSLH+LKGLFKDMVLHLGFT+EGRA DELPESLLACSTLHYPM+ERAVEF+V Sbjct: 431 VQCVMYFRMKESTARAMENLATASEGVRLWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKGENYIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGRAADELPESLLACSTLHYPMMERAVEFDV 584
BLAST of mRNA_L-elsbetiae_contig18525.5390.1 vs. uniprot
Match: A0A835YTM0_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTM0_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.310e-34 Identity = 69/159 (43.40%), Postives = 96/159 (60.38%), Query Frame = 1 Query: 1 VQCVLYFRMKDSTARAMENLETASEGVQLWVTYCERVGVDDDFHGRFKCIAVIANSESLGLPSFVTKYNGKPVLINRSGHWVKGE-------NYIENTINVHRFSFIAKKSLHALKGLFKDMVLHLGFTIEGRATDELPESLLACSTLHYPMVERAVEF 456 +Q + YF + T A+ +L+ A V+LW YC + G D++ GRFK + V+ N GL + + +NGKPVLI ++G G+ +E INVHRF F AKK+LH L F+ M+LH+GFTIEGR DELPE +LAC+ L+YP + A E Sbjct: 480 LQAIFYFAITQQTVDALRDLDKAPSAVKLWARYCAKHGEDEETRGRFKAMCVVGNWADAGLNANLKGWNGKPVLITKTGETFAGKPAAGGGMTCLEMDINVHRFRFPAKKALHTLMERFEKMILHVGFTIEGRTPDELPEGMLACACLNYPCPDEAEEL 638
BLAST of mRNA_L-elsbetiae_contig18525.5390.1 vs. uniprot
Match: K0RLE4_THAOC (EDR2_C domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RLE4_THAOC) HSP 1 Score: 125 bits (313), Expect = 2.020e-32 Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 13 LYFRMKDSTARAMENLETASEGVQLWVTYCERVGVDDDFHGRFKCIAVIANSESLGLPSFVTKYNGKPVLINRSGHWVK-GENYIENTINVHRFSFIAKKSLHALKGLFKDMVLHLGFTIEGRATDELPESLL 408 L F + T + +L+TAS V+L+ +C R + DF GRFKC+ +I + ES G+P F+ YNGKP L+ +SG + + G YIE TINV R+ ++A+K L AL F + VL++GFTIEGR DELPE+LL Sbjct: 19 LVFALSKDTLDQLRDLDTASPAVRLFSEWCRRAEDEADFRGRFKCMGMIEDVESSGVPQFIAGYNGKPALVTKSGTFTRHGGRYIEFTINVDRWGYLARKGLCALTPSFPNFVLNIGFTIEGRGDDELPEALL 151
BLAST of mRNA_L-elsbetiae_contig18525.5390.1 vs. uniprot
Match: A0A7S2M600_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M600_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.240e-29 Identity = 61/148 (41.22%), Postives = 95/148 (64.19%), Query Frame = 1 Query: 13 LYFRMKDSTARAMENLETASEGVQLWVTYCERVGVDDDFHGRFKCIAVIANSESLGLPSFVTKYNGKPVLINRSGHWVKGENYIENTINVHRFSFIAKKSLHALKGLFKDMVLHLGFTIEGRATDELPESLLA-CSTLHYPMVERAVE 453 + F + T +++++TAS GV+L +C R + DF GRFKC+ I + ES +P F+ YNGKP L+ +SG + + ENYIE TINV+ ++F+A+K LH+L F+D + ++GFTIE R +E+PE LL C ++ + AV+ Sbjct: 448 MVFVLSKDTLEQLKDIDTASPGVKLLSEWCRRAESEPDFKGRFKCMGQIEDIESTSIPKFIHGYNGKPALVTKSGTFTRHENYIEFTINVNYWAFLARKGLHSLMPYFQDFIFNVGFTIEARHDEEMPEVLLGGCRIMNLDPDKAAVD 595
BLAST of mRNA_L-elsbetiae_contig18525.5390.1 vs. uniprot
Match: A0A7S2MX10_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MX10_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.060e-28 Identity = 53/134 (39.55%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 7 CVLYFRMKDSTARAMENLETASEGVQLWVTYCERVGVDDDFHGRFKCIAVIANSESLGLPSFVTKYNGKPVLINRSGHWVKGENYIENTINVHRFSFIAKKSLHALKGLFKDMVLHLGFTIEGRATDELPESLL 408 CV+ F ++ +++++ AS V+L +C + +F GRFK I ++ E +G+P F+T+YNGKP LI +SG++ + E YIE INVH ++++A+K + L F +++++GFTIEGR+ ELPE LL Sbjct: 123 CVIVFAIEQWVVEELKDIDNASPAVKLLAEWCREAETNVEFRGRFKAIGLVEEMEKMGIPGFITQYNGKPTLITKSGNFTRHEKYIEMAINVHLWAYVARKGMLTLLPSFAKLLINVGFTIEGRSDMELPEVLL 256
BLAST of mRNA_L-elsbetiae_contig18525.5390.1 vs. uniprot
Match: A0A6T8K6G2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8K6G2_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.280e-24 Identity = 50/133 (37.59%), Postives = 83/133 (62.41%), Query Frame = 1 Query: 10 VLYFRMKDSTARAMENLETASEGVQLWVTYCERVGVDDDFHGRFKCIAVIANSESLGLPSFVTKYNGKPVLINRSGHWVKGENYIENTINVHRFSFIAKKSLHALKGLFKDMVLHLGFTIEGRATDELPESLL 408 +LY + T ++++ AS V+L V +C++ D R K + +I + E+ LP F++++NGKPVLI +S + + NYIE +N+H+++++ KK L +L+ F + ++GFTIEGR DELPE LL Sbjct: 85 ILYLVIAKHTINQLKDMNKASPAVKLLVEWCKKSENDFSMRSRMKAMCLIDDVENSSLPGFISRFNGKPVLITKSSTFTRFPNYIELQVNIHKWAYMPKKGLFSLQPKFPSLAFNVGFTIEGREDDELPEVLL 217
BLAST of mRNA_L-elsbetiae_contig18525.5390.1 vs. uniprot
Match: A0A7S2W974_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W974_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.090e-23 Identity = 63/145 (43.45%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 1 VQCVLYFRMKDSTARAMENLETASEGVQLWVTYCERVGVDDDFHGRFKCIAVIANSESLGLPSFVTKYNGKPVLI-NRSGHWVKG--------ENYIENTINVHRFSFIAKKSLHALKGLFKDMVLHLGFTIEGRATDELPESLL 408 + V YF +++ T +A+ +LETA + VQL T+C D RFKCI ++ N E +G+PS + YNGKPVLI NRS VKG ++ I +NV + +A+ LH L G L +GFTIEGRA DELPE LL Sbjct: 174 LNAVFYFGLREETQQALASLETAPKAVQLLETFCRSAHADPSVFNRFKCIGMLRNYEEVGMPSIMKGYNGKPVLIRNRSA--VKGGSGVMDQQQDSIIMHVNVRLWPLLARTGLHTLFGASAKCDLDVGFTIEGRADDELPEVLL 316
BLAST of mRNA_L-elsbetiae_contig18525.5390.1 vs. uniprot
Match: W7U5D7_9STRA (EDR2_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5D7_9STRA) HSP 1 Score: 103 bits (256), Expect = 5.570e-22 Identity = 58/133 (43.61%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 79 VQLWVTYCERVGVDDDFHGRFKCIAVIANSESLGLPSFVTKYNGKPVLINRSGHWVKGEN--------YIENTINVHRFSFIAKKSLHALKGLFKDMVLHLGFTIEGRATDELPESLLACSTLHYPMVERAVE 453 +QL Y R D D GR K IA AN ++L LPSF++ YNGKPVLI +SG +G + YIE I VHRF+++A+K L+ F M+L + F +EGR DELPE +L + L+ E AVE Sbjct: 262 LQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPSFISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDYEAAVE 394
BLAST of mRNA_L-elsbetiae_contig18525.5390.1 vs. uniprot
Match: A0A7S2KYG5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYG5_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.880e-21 Identity = 56/149 (37.58%), Postives = 84/149 (56.38%), Query Frame = 1 Query: 10 VLYFRMKDSTARAMENLETASEGVQLWVTYCERVGVDDDFHGRFKCIAVIANSESLGLPSFVTKYNGKPVLINRSG----HWVKGENYIENTINVHRFSFIAKKSLHALKGLFKDMVLHLGFTIEGRATDELPESLLA-CSTLHYPMVE 441 VLY + T +++L+TAS V+L +C R D F R K + V + E+LG+PSF+T+YNGKP LI SG H +Y+E +N+ ++ +A+K +H+LK +L TIEGR DELPE LL C +++ + Sbjct: 563 VLYLAISKQTLLELKDLKTASPAVKLLEEWCRRAEGDFAFRSRCKFMVVADDVEALGVPSFLTRYNGKPCLITSSGTLTRHRDAASHYLEMNVNIRMWNALARKGIHSLKPYIPSATFNLAITIEGRDNDELPEVLLGGCRMMNFDFAQ 711
BLAST of mRNA_L-elsbetiae_contig18525.5390.1 vs. uniprot
Match: A0A7S0NZH2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NZH2_9EUKA) HSP 1 Score: 99.8 bits (247), Expect = 2.180e-20 Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 1 VQCVLYFRMKDSTARAMENLETASEGVQLWVTYCERVGVDDDFHGRFKCIAVIANSESLGLPSFVTKYNGKPVLINRSGHWVKGENYIENTINVHRFSFIAKKSLHALKGLFKDMV-LHLGFTIEGRATDELPESLLACSTLH 426 V CV YF + A+A E A+ VQL + ER + FK IA+ N E LG+P + +YNGKPVLI +SG GE Y+E ++V RF++I++ SLH+ +H+GF ++G A DELPE LL LH Sbjct: 561 VSCVFYFGCTPA-AQAASRAEEAAAPVQLVRRWYERAPAERMHGVTFKVIALADNLEELGVPRMLHRYNGKPVLIRKSGEMHVGEGYVEIDLHVSRFNYISQSSLHSFAVAKSSKAEMHIGFLLQGTADDELPEQLLGAVRLH 702 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18525.5390.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18525.5390.1 >prot_L-elsbetiae_contig18525.5390.1 ID=prot_L-elsbetiae_contig18525.5390.1|Name=mRNA_L-elsbetiae_contig18525.5390.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=147bp MKDSTARAMENLETASEGVQLWVTYCERVGVDDDFHGRFKCIAVIANSESback to top mRNA from alignment at L-elsbetiae_contig18525:1045..2828+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18525.5390.1 ID=mRNA_L-elsbetiae_contig18525.5390.1|Name=mRNA_L-elsbetiae_contig18525.5390.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1784bp|location=Sequence derived from alignment at L-elsbetiae_contig18525:1045..2828+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18525:1045..2828+ >mRNA_L-elsbetiae_contig18525.5390.1 ID=mRNA_L-elsbetiae_contig18525.5390.1|Name=mRNA_L-elsbetiae_contig18525.5390.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=882bp|location=Sequence derived from alignment at L-elsbetiae_contig18525:1045..2828+ (Laminarionema elsbetiae ELsaHSoW15)back to top |