mRNA_L-elsbetiae_contig1799.5148.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1799.5148.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 104 bits (259), Expect = 5.190e-24 Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = -3 Query: 103 KAGAAGAEEVVDSLLRLGADETIADYEGKTAADVVGTDIEKENNLADNVERVCELLTHAPADRAWRRRGYLVLCRAHNGKVQLRQEASST 372 +AG GA EVV+SLLR GADETIA+ +G A D++G D+E+E+ L ++VERV ELL +APADRAWRRRGYL++CRA +V R+ S T Sbjct: 253 QAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGT 342
BLAST of mRNA_L-elsbetiae_contig1799.5148.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 6.180e-18 Identity = 59/122 (48.36%), Postives = 74/122 (60.66%), Query Frame = -3 Query: 13 AGAAGAEEVVDSLLRLGADETIADYEGKTAADVVGTDIEKENNLADNVERVCELLTHAPADRAWRRRGYLVLCRAHNGKVQLRQEASSTETETMLS-TGKGTKLANASEI--NSSTGAVGDG 369 AG GA EVVD LLR ADET D G T ++VG + +++ NV+RV +LL +AP DRAWRRRG LVLCRAH ++ LRQ AS + T+L T TKL ++ S GA DG Sbjct: 250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADG 371
BLAST of mRNA_L-elsbetiae_contig1799.5148.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 1.370e-17 Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = -3 Query: 109 KAGAAGAEEVVDSLLRLGADETIADYEGKTAADVVGTDIEKENNLADNVERVCELLTHAPADRAWRRRGYLVLCRAH--NGKVQLRQEAS 372 KAG+ G E+VD LLR GADET G TAAD+V E+ ++LA++V+RV +LL APADRAWRRRG+L+L RAH G+VQ S Sbjct: 632 KAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTS 721
BLAST of mRNA_L-elsbetiae_contig1799.5148.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 6.800e-15 Identity = 45/78 (57.69%), Postives = 54/78 (69.23%), Query Frame = -3 Query: 124 GAEEVVDSLLRLGADETIADYEGKTAADVVGTDIEKENNLADNVERVCELLTHAPADRAWRRRGYLVLCRAHNGKVQL 357 G+ +VVD LLR GADETI +G+TAAD +GT + D+ ER LL APADRAWRRRG LVLCRAH ++QL Sbjct: 288 GSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDD-ERARSLLARAPADRAWRRRGLLVLCRAHPDRLQL 364
BLAST of mRNA_L-elsbetiae_contig1799.5148.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 2.750e-14 Identity = 41/76 (53.95%), Postives = 51/76 (67.11%), Query Frame = -3 Query: 142 AGAAGAEEVVDSLLRLGADETIADYEGKTAADVVGTDIEKENNLADNVERVCELLTHAPADRAWRRRGYLVLCRAH 369 AG G EVVDSLLR GADETI D EG+ A D++ ++ + + +RV +LL +A ADRAW RR YLVLCR H Sbjct: 95 AGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTH 170
BLAST of mRNA_L-elsbetiae_contig1799.5148.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 3.220e-14 Identity = 44/83 (53.01%), Postives = 54/83 (65.06%), Query Frame = -3 Query: 124 KAGAAGAEEVVDSLLRLGADETIADYEGKTAADVVGTDIEKENNLADNVERVCELLTHAPADRAWRRRGYLVLCRAHNGKVQL 372 +AG G EVVD LLR GADET G AAD +G + +E+ + + E V +LL +APADRAWRRR LVLCRA K+QL Sbjct: 272 RAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQL 354
BLAST of mRNA_L-elsbetiae_contig1799.5148.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 3.870e-14 Identity = 50/92 (54.35%), Postives = 61/92 (66.30%), Query Frame = -3 Query: 106 KAGAAGAEEVVDSLLRLGADETIADYEGKTAADVVGTDIEKEN---NLADNVERVCELLTHAPADRAWRRRGYLVLCRAHNGKVQLRQEASS 372 +AG G +VD LLR GADET + +G+TAA+VVG IE N D VERV +LL +AP DRAWRRRG+LVLCRA K + + ASS Sbjct: 215 QAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQD-VERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASS 305
BLAST of mRNA_L-elsbetiae_contig1799.5148.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 1.400e-13 Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = -3 Query: 103 KAGAAGAEEVVDSLLRLGADETIADYEGKTAADVVGTDIEKEN---NLADNVERVCELLTHAPADRAWRRRGYLVLCRAHNGKVQLRQEASST 372 +AG G +VD LLR GADET + +G+TAA+VVG IE N D +ERV +LL +APADRAWRRRG LVLCRA K + + ASS+ Sbjct: 264 QAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQD-LERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSS 355
BLAST of mRNA_L-elsbetiae_contig1799.5148.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 4.160e-13 Identity = 44/78 (56.41%), Postives = 52/78 (66.67%), Query Frame = -3 Query: 124 GAEEVVDSLLRLGADETIADYEGKTAADVVGTDIEKENNLADNVERVCELLTHAPADRAWRRRGYLVLCRAHNGKVQL 357 G+ +VV LLR GADETI +GKTAAD +GT D+ ER LLT APADRAWRRRG LVLC A+ ++QL Sbjct: 284 GSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDD-ERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQL 360
BLAST of mRNA_L-elsbetiae_contig1799.5148.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 6.230e-13 Identity = 48/86 (55.81%), Postives = 57/86 (66.28%), Query Frame = -3 Query: 115 AGAAGAEEVVDSLLRLGADETIADYEGKTAADVVGTDIEKENNLADN-VERVCELLTHAPADRAWRRRGYLVLCRAHNGKVQLRQE 369 AG G+ E+VD LLR GADET D G+ AD VG +E + L + V V ELL +APADRAWRRRG LVLCRA + +LRQE Sbjct: 272 AGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQE 357 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1799.5148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1799.5148.1 >prot_L-elsbetiae_contig1799.5148.1 ID=prot_L-elsbetiae_contig1799.5148.1|Name=mRNA_L-elsbetiae_contig1799.5148.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp MRLPAWYLCPCSALSRSQCCWPPVSAAPCRCGRGTTPGSPGDAMLCRPERback to top mRNA from alignment at L-elsbetiae_contig1799:18326..18699+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1799.5148.1 ID=mRNA_L-elsbetiae_contig1799.5148.1|Name=mRNA_L-elsbetiae_contig1799.5148.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=374bp|location=Sequence derived from alignment at L-elsbetiae_contig1799:18326..18699+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1799:18326..18699+ >mRNA_L-elsbetiae_contig1799.5148.1 ID=mRNA_L-elsbetiae_contig1799.5148.1|Name=mRNA_L-elsbetiae_contig1799.5148.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=648bp|location=Sequence derived from alignment at L-elsbetiae_contig1799:18326..18699+ (Laminarionema elsbetiae ELsaHSoW15)back to top |