prot_L-elsbetiae_contig17973.5139.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17973.5139.1
Unique Nameprot_L-elsbetiae_contig17973.5139.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length95
Homology
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BLAST of mRNA_L-elsbetiae_contig17973.5139.1 vs. uniprot
Match: D7G2V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2V3_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 2.850e-18
Identity = 48/80 (60.00%), Postives = 52/80 (65.00%), Query Frame = 0 
Query:   16 GSCFCHFLPNAVMGAYLTTLCPKVAMLSCLKKGLCESRPDRTWRFTREIGMPWVSTSISLPADAQQRITRQLSSAADTTS 95
            G  F  F      G       P+   ++CLKK LCES PD TWR TREIGMP  STSI LPADAQQ ITRQ+SSAADTTS
Sbjct:   57 GKLFLPFFAERGDGGISHNSVPEGRYVNCLKKRLCESIPDSTWRLTREIGMP-KSTSILLPADAQQTITRQVSSAADTTS 135
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17973.5139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2V3_ECTSI2.850e-1860.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17973contigL-elsbetiae_contig17973:2..286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17973.5139.1mRNA_L-elsbetiae_contig17973.5139.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17973 2..286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17973.5139.1 ID=prot_L-elsbetiae_contig17973.5139.1|Name=mRNA_L-elsbetiae_contig17973.5139.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=95bp
LSRQTSATRTARQAPGSCFCHFLPNAVMGAYLTTLCPKVAMLSCLKKGLC
ESRPDRTWRFTREIGMPWVSTSISLPADAQQRITRQLSSAADTTS
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