mRNA_L-elsbetiae_contig17943.5133.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17943.5133.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 214 bits (544), Expect = 6.690e-65 Identity = 104/171 (60.82%), Postives = 130/171 (76.02%), Query Frame = 1 Query: 28 RKRVPWSTYTKPMLGDGTFKGRFRMGHEDFMALLELIREELQRDEKMGGLRNGAIPVEYQLAMTLRWLAGSSIYEGMDMHVIARSTAYSIVHRVIDALNASSDLDCVWPVGDDVARAAAGFEKRSSWNVIEKAFGAMDGLFIRLIKPNHHEHAATNSFFSGHKKAFGMNFQ 540 R+R + TY +PM+ D TF+ RFRM + DFM L +++R +LQRDEKMG LRNGAIPVE+QLAMTLR+LAG S++E MD +VIA+STAY+IVHRVIDA+N + L+C WP GDD A + +RS+ VI + GAMDGLF+RLI P HA SF+SGHKKAFGMNFQ Sbjct: 52 RERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQ 222
BLAST of mRNA_L-elsbetiae_contig17943.5133.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 207 bits (527), Expect = 1.970e-62 Identity = 99/178 (55.62%), Postives = 130/178 (73.03%), Query Frame = 1 Query: 7 TRKPLLPRKRVPWSTYTKPMLGDGTFKGRFRMGHEDFMALLELIREELQRDEKMGGLRNGAIPVEYQLAMTLRWLAGSSIYEGMDMHVIARSTAYSIVHRVIDALNASSDLDCVWPVGDDVARAAAGFEKRSSWNVIEKAFGAMDGLFIRLIKPNHHEHAATNSFFSGHKKAFGMNFQ 540 TR + R+R W TY KPM+ DGTF+ RFRM + +F L +++R +L+R+E+MG LRNG IPVE+QLAM LR+LAG S++E MD +VIARSTAY+IVHRVIDA+N + +LDCVWP G+D + +RS+ VI GAMDGLF+R+ +P+ H SF+SGHKK FGMNFQ Sbjct: 41 TRDKFVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQ 218
BLAST of mRNA_L-elsbetiae_contig17943.5133.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 201 bits (511), Expect = 2.800e-60 Identity = 101/179 (56.42%), Postives = 128/179 (71.51%), Query Frame = 1 Query: 4 RTRKPLLPRKRVPWSTYTKPMLGDGTFKGRFRMGHEDFMALLELIREELQRDEKMGGLRNGAIPVEYQLAMTLRWLAGSSIYEGMDMHVIARSTAYSIVHRVIDALNASSDLDCVWPVGDDVARAAAGFEKRSSWNVIEKAFGAMDGLFIRLIKPNHHEHAATNSFFSGHKKAFGMNFQ 540 R R L+ R+R P+ TY KPML D TF RFRM ++DF L++ +R LQ++EK G LRNGAIPVEYQ+AMTLRWLAG SIYE MD HVIARSTAY + VI+ALNA +L+C WP G+D+ + + +V+ K GAMDGLF+R+IKP+ E A N +++GHKK FGMNFQ Sbjct: 44 RNRSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ 222
BLAST of mRNA_L-elsbetiae_contig17943.5133.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 172 bits (435), Expect = 1.430e-49 Identity = 89/172 (51.74%), Postives = 116/172 (67.44%), Query Frame = 1 Query: 4 RTRKPLLPRKRVPWSTYTKPMLGDGTFKGRFRMGHEDFMALLELIREELQRDEKMGGLRNGAIPVEYQLAMTLRWLAGSSIYEGMDMHVIARSTAYSIVHRVIDALNASSDLDCVWPVGDDVARAAAGFEKRSSWNVIEKAFGAMDGLFIRLIKPNHHEHAATNSFFSGHKK 519 R R L+ R+R P+ T+ KP+L D TF RFRM ++DF L++ +R L ++EKMG LR GAIPVEYQ+AMTLRWLAG SIYE MD HVIARSTAY + VI+ALNA +L+C WP + +V+ K GAMDGLF+R+IKP+ E A N +++GH+K Sbjct: 44 RNRSTLVARERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWP--------------EARMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRK 201
BLAST of mRNA_L-elsbetiae_contig17943.5133.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 173 bits (438), Expect = 3.560e-49 Identity = 85/141 (60.28%), Postives = 107/141 (75.89%), Query Frame = 1 Query: 118 MALLELIREELQRDEKMGGLRNGAIPVEYQLAMTLRWLAGSSIYEGMDMHVIARSTAYSIVHRVIDALNASSDLDCVWPVGDDVARAAAGFEKRSSWNVIEKAFGAMDGLFIRLIKPNHHEHAATNSFFSGHKKAFGMNFQ 540 + L++ +R LQ++++MG LRNGAIPVE Q+AMTLRWLAG SIYE MD HVIARSTAY + VI+ALNA +L+C WP G+D ARAA F RSS +V+ K GA DGLF+R+IKP+ E A N +++GHKK FGMNFQ Sbjct: 71 LVLVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ 211
BLAST of mRNA_L-elsbetiae_contig17943.5133.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE) HSP 1 Score: 161 bits (407), Expect = 7.150e-48 Identity = 81/125 (64.80%), Postives = 95/125 (76.00%), Query Frame = 1 Query: 166 MGGLRNGAIPVEYQLAMTLRWLAGSSIYEGMDMHVIARSTAYSIVHRVIDALNASSDLDCVWPVGDDVARAAAGFEKRSSWNVIEKAFGAMDGLFIRLIKPNHHEHAATNSFFSGHKKAFGMNFQ 540 MG LRNGAIPVE Q+AMTLRWLAG SIYE MD HVIARSTAY + VI+ALNA +L+C WP G+D ARAA F RSS +V+ K GAMD LF+R+IKP+ E A N +++GHKK FGMNFQ Sbjct: 1 MGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAARAAELFRNRSSMDVVRKCVGAMDVLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ 125
BLAST of mRNA_L-elsbetiae_contig17943.5133.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.960e-32 Identity = 77/159 (48.43%), Postives = 99/159 (62.26%), Query Frame = 1 Query: 1 VRTRKPLLPRKRVPWSTYTKPMLGDGTFKGRFRMGHEDFMALLELIREELQRDEKMGGLRNGAIPVEYQLAMTLRWLAGSSIYEGMDMHVIARSTAYSIVHRVIDALNASSD--LDCVWPVGDDVARAAAGFEK------RSSWNVIEKAFGAMDGLFI 453 +R+R L+ R R P+ TY KPML D TF RFRM ++DF L++ +R LQ++EKMG LRNGAIPVEYQ+AMTLRWLAG S YE MD HVIARSTAY H V DA ++C D A +GF+K + V + A+GA + + + Sbjct: 43 MRSRSTLVARVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAY---HAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVV 198
BLAST of mRNA_L-elsbetiae_contig17943.5133.1 vs. uniprot
Match: A0A6H5J9B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B3_9PHAE) HSP 1 Score: 111 bits (277), Expect = 3.480e-28 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 1 Query: 166 MGGLRNGAIPVEYQLAMTLRWLAGSSIYEGMDMHVIARSTAYSIVHRVIDALNASSDLDCVWPVGDDVARAAAGFEKRSSW 408 MG LRNGAIPVEYQ+AMTLRWLAG SIYE MD HVIARSTAY + VI+ALNA +L+C WP G+D A AA F RSS+ Sbjct: 1 MGLLRNGAIPVEYQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAAGAAELFRNRSSY 81
BLAST of mRNA_L-elsbetiae_contig17943.5133.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 114 bits (285), Expect = 3.280e-27 Identity = 54/102 (52.94%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 235 GSSIYEGMDMHVIARSTAYSIVHRVIDALNASSDLDCVWPVGDDVARAAAGFEKRSSWNVIEKAFGAMDGLFIRLIKPNHHEHAATNSFFSGHKKAFGMNFQ 540 G SI+E MD V A+STAY+IV+RVIDA+N + + DCVWP GDD + +RS+ NVI GAMDGLF+ + +P+ H F+SGHKK FGMNFQ Sbjct: 51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQ 152
BLAST of mRNA_L-elsbetiae_contig17943.5133.1 vs. uniprot
Match: A0A6H5JYU2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU2_9PHAE) HSP 1 Score: 106 bits (265), Expect = 1.820e-23 Identity = 54/95 (56.84%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 256 MDMHVIARSTAYSIVHRVIDALNASSDLDCVWPVGDDVARAAAGFEKRSSWNVIEKAFGAMDGLFIRLIKPNHHEHAATNSFFSGHKKAFGMNFQ 540 MD HVIARSTAY VI+ALNA S+++C WP G+D ARAA F RSS +V+ K GAMDG F+R+IKP+ E N +GHKK FG NFQ Sbjct: 1 MDDHVIARSTAYHETSTVINALNACSEVNCKWPEGEDAARAAELFRNRSSIDVVRKCVGAMDGFFVRMIKPSAKEVVEPNLCNNGHKKGFGTNFQ 95 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17943.5133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17943.5133.1 >prot_L-elsbetiae_contig17943.5133.1 ID=prot_L-elsbetiae_contig17943.5133.1|Name=mRNA_L-elsbetiae_contig17943.5133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=180bp VRTRKPLLPRKRVPWSTYTKPMLGDGTFKGRFRMGHEDFMALLELIREELback to top mRNA from alignment at L-elsbetiae_contig17943:2077..2616- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17943.5133.1 ID=mRNA_L-elsbetiae_contig17943.5133.1|Name=mRNA_L-elsbetiae_contig17943.5133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=540bp|location=Sequence derived from alignment at L-elsbetiae_contig17943:2077..2616- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17943:2077..2616- >mRNA_L-elsbetiae_contig17943.5133.1 ID=mRNA_L-elsbetiae_contig17943.5133.1|Name=mRNA_L-elsbetiae_contig17943.5133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1080bp|location=Sequence derived from alignment at L-elsbetiae_contig17943:2077..2616- (Laminarionema elsbetiae ELsaHSoW15)back to top |