Homology
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match:
D8LG79_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG79_ECTSI)
HSP 1 Score: 341 bits (875), Expect = 1.840e-113
Identity = 213/331 (64.35%), Postives = 239/331 (72.21%), Query Frame = 1
Query: 1 FSAENDDSN-IESVATSPRRGRNGLAAVQASGPLRIPSNRSQNTSDAPTTSRAYGGGLATVRASERFLQQSKNHNSSSRDTTRVRSFSESRGGLGADNAGKLMEEGISHVQ-----GSKTLLGGKVEVGEGSSNHRNHDVGFLAALRTMIFGARDPESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTIPL 975
FS EN+D+N + + S + ++GLA+ QASG + ++ DAP+TSR + GG DT + G D+A KL EEGI + GSK G GS+ HR+ D GFLA LRT +FGAR+P SDLS ETLEELHMVTGFT KELRLTRSHFLALV + SFITREEFLEIPSVANNPLRERLLVCFGFDSM NLKF+EXXXXXXXXXXX+AQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLEL+TAAPEGVKIDLNAVAAR+IEEG S PGV SLSL D+IKIMGAADFADKLTIPL
Sbjct: 30 FSGENNDNNSMNNREGSAKPTKSGLASFQASGRFLASYDHHRDARDAPSTSRRHRGG----------------------DTYGINRS-------GVDDARKL-EEGIRGLSSQPKDGSKRPSGENETGNRGSNGHRHKDTGFLATLRTTLFGAREPVSDLSIETLEELHMVTGFTYKELRLTRSHFLALVNEASFITREEFLEIPSVANNPLRERLLVCFGFDSMDNLKFKEXXXXXXXXXXXSAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELITAAPEGVKIDLNAVAARVIEEGASAPGVTSLSLGDFIKIMGAADFADKLTIPL 330
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match:
A0A835YVJ1_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVJ1_9STRA)
HSP 1 Score: 132 bits (331), Expect = 4.490e-34
Identity = 72/155 (46.45%), Postives = 96/155 (61.94%), Query Frame = 1
Query: 511 KELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTIPL 975
+EL R FL V D +ITR+EF IPSV +PLR+RL+VCFGF + L FR+ +A DQKLR+AF L D D DG++S D+ YLE + PEG +IDL AVAARII+E + P K+++ AD+ ++M AD +L IPL
Sbjct: 1 RELHSLRRRFLQHVSDRDYITRDEFAAIPSVNISPLRDRLMVCFGFHQLDWLPFRDFAEAIAPFNNPSAPADQKLRVAFQLQDFDDDGELSATDVRCYLERIITIPEGAEIDLEAVAARIIQEACTNPAQKAITQADFSRVMQGADL--RLYIPL 153
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match:
A0A482SSL2_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSL2_9ARCH)
HSP 1 Score: 110 bits (276), Expect = 1.300e-25
Identity = 58/175 (33.14%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 451 ESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDS-MANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTIP 972
ESD+ E +EE M++GF +E+ + FL ++ + +E FL + + NNPL+ER+ +CFG+D + L F + QR+QKL+ AF + D D DG ++KNDLV+YLE +T+ K ++ VA ++++E S ++++ D+ +++ DF KL +P
Sbjct: 13 ESDIPDEKMEEFRMLSGFKPREIHRLKKSFLKYTENRDLLAKESFLSLEPLVNNPLKERIALCFGYDEEVVELDF-QAFLCGLALFNSPGQREQKLKTAFRIQDFDNDGVINKNDLVKYLEALTSGTLDEK-QISEVADQVLKETASDALQENITYNDFQRVVAPQDFQAKLRLP 185
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match:
A0A485KSR6_9STRA (Aste57867_10739 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSR6_9STRA)
HSP 1 Score: 100 bits (250), Expect = 7.960e-22
Identity = 65/172 (37.79%), Postives = 94/172 (54.65%), Query Frame = 1
Query: 457 DLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVT-----AAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFAD 957
DL E LEE+ MVT +++ R FL +T++EFL IP+VA NPLRERL F ++F++ ++ RD KL+MAF L D+DGDG+V+K DLV Y++LV A E K +++ +A R +EE S P + LS D+ K++ D D
Sbjct: 13 DLDLERLEEIRMVTQLPISDIQQMRLRFLGWSPSDD-MTKDEFLAIPAVAVNPLRERLFSLFELTPTGTIRFQDFVTLMAVFTYHSS-RDTKLKMAFKLQDVDGDGKVTKGDLVAYMKLVVDFGEMPADEADK-NMDTLAMRTLEEASSDPSGEFLSYDDFAKVVMTTDDYD 181
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match:
A0A024U202_9STRA (EF-hand domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U202_9STRA)
HSP 1 Score: 95.1 bits (235), Expect = 1.110e-19
Identity = 66/185 (35.68%), Postives = 97/185 (52.43%), Query Frame = 1
Query: 439 ARDPESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVT---AAPEGVKID--LNAVAARIIEEGVSTPGVKSLSLADYIKI-MGAADFADKLTIPL 975
+++ E DL+ E LEE+ M+T E+ R FL + +T+E+F IP VA NPLR RL F + F++ ++ RD KLRM+F L D+DGDG++SK DLV Y++LV P+ ++D L+ +A R +EE + LS D+ K+ M DF KL L
Sbjct: 6 SKEVECDLNMERLEEIRMLTQLPIPEIIKMRLQFLKWSPNDE-MTQEQFFAIPGVAVNPLRNRLFELFELSPTHTVSFQDFATLMAVFTYHSS-RDNKLRMSFKLQDMDGDGKISKADLVSYMKLVVNFGGVPDPDELDKKLDMLATRTLEEASTDASGDFLSYDDFAKVVMTTDDFETKLLFDL 188
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match:
W4GK44_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GK44_9STRA)
HSP 1 Score: 89.7 bits (221), Expect = 8.740e-18
Identity = 60/180 (33.33%), Postives = 96/180 (53.33%), Query Frame = 1
Query: 439 ARDPESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAAD-FADKLTIPL 975
+++ E DLS E LEE+ M+T ++ R FL +T+++F IP+VA NPLR RL F + + F++ RD KLR++F L D+DGDG+++K DL+ Y++LV G K+D+ +A+R +EE + LS D+ K++ D + KL + L
Sbjct: 6 SKEVECDLSLERLEEIRMLTQLPIPDIIKMRVQFLKWSPSDD-MTQDQFFAIPAVAVNPLRHRLFSLFELSASQTIAFQDFASLMAIFTYH-GSRDSKLRLSFKLQDMDGDGRITKPDLIAYMKLVVDF--GDKLDV--LASRTLEEASTDASGDFLSYDDFAKVVTTTDDYETKLLLEL 179
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match:
A0A1V9YFZ7_9STRA (Calcineurin regulatory subunit B n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFZ7_9STRA)
HSP 1 Score: 85.1 bits (209), Expect = 6.860e-16
Identity = 60/189 (31.75%), Postives = 92/189 (48.68%), Query Frame = 1
Query: 457 DLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQ--------------RDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNA--VAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTIPL 975
DLS E +EE+ M+T ++++ R +L D +T++ F IP +A NPL+ERL F ++ F AQ +D KLR +F + D DGDG++S+ DL+ YL LV A P + D+ + AR +EE S + L+ D+ K++ +F KL IPL
Sbjct: 15 DLSPEQIEEIRMLTLLPVEDIQHMRLQYLRWSTDDR-LTKDAFFAIPVIARNPLKERLWSLFESSPDGHVSFHVHCPSYMLYLIWGAQAFVLVMAVFTYHSSKDSKLRASFKMHDFDGDGRLSRADLLSYLRLV-ADPGDMSEDIEKAHLVARTLEEASSDAAAEFLTFDDFTKVVLTTEFEAKLQIPL 201
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match:
A0A024U1I7_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1I7_9STRA)
HSP 1 Score: 82.4 bits (202), Expect = 1.890e-15
Identity = 49/126 (38.89%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 439 ARDPESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELV 816
+++ E DL+ E LEE+ M+T E+ R FL + +T+E+F IP VA NPLR RL F + F++ ++ RD KLRM+F L D+DGDG++SK DLV Y++LV
Sbjct: 6 SKEVECDLNMERLEEIRMLTQLPIPEIIKMRLQFLKWSPNDE-MTQEQFFAIPGVAVNPLRNRLFELFELSPTHTVSFQDFATLMAVFTYHSS-RDNKLRMSFKLQDMDGDGKISKADLVSYMKLV 129
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match:
A0A7S3D416_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D416_9EUKA)
HSP 1 Score: 79.3 bits (194), Expect = 5.060e-14
Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = 1
Query: 454 SDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSF-ITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTIPL 975
S L+ E ++ + +T F+ +E++ F L KD S IT +EF++IP +A NPL ER++ F D + FRE +KL+ AF + D+DGDG +S +L L+++ A + L + + I E K +S ++I ++G + KL IPL
Sbjct: 6 SSLTPEEIQAIENLTSFSEEEIKRLHRRFNKLDKDASGRITIDEFMQIPELATNPLIERVIALFDSDGDETVDFREFVTALSTFSVH-GDPQRKLKFAFRVYDVDGDGFISNGELFTVLKMMVGA-NLTDVQLQQIVDKTIMEADKDRDGK-ISFEEFIALIGHSSMEQKLYIPL 177
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Match:
A0A067NAC6_9AGAM (Calcineurin subunit B n=4 Tax=Agaricomycetes incertae sedis TaxID=355688 RepID=A0A067NAC6_9AGAM)
HSP 1 Score: 77.4 bits (189), Expect = 2.400e-13
Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = 1
Query: 463 STETLEELHMVTGFTSKELRLTRSHFLALVKDPS-FITREEFLEIPSVANNPLRERLLVCFGFDSMANLKFREXXXXXXXXXXXTAQRDQKLRMAFTLVDIDGDGQVSKNDLVRYLELVTAAPEGVK-IDLNAVAARIIEEGVSTPGVKSLSLADYIKIMGAADFADKLTI 969
S++ +EE+ + F S EL + F+ L KD S I REEFL+IP +ANNPL R++ F D + F+E R++KLR AF + D+D DG +S +L L+++ +K L + + I E G LS A++ ++ D ++T+
Sbjct: 5 SSQFMEEMEKKSNFNSAELERLKKRFMKLDKDASGSIDREEFLQIPQIANNPLASRMIAIFDEDGGGTVDFQEFVGGLSAFSSRGG-REEKLRFAFKVYDMDRDGFISNGELFLVLKMMVG--NNLKDTQLQQIVDKTIMEA-DKDGDGKLSFAEFGAMVAKTDIVKQMTL 171
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1790.5111.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.84e-113 / Id = 64.35 Expect = 4.49e-34 / Id = 46.45 Expect = 1.30e-25 / Id = 33.14 Expect = 7.96e-22 / Id = 37.79 Expect = 1.11e-19 / Id = 35.68 Expect = 8.74e-18 / Id = 33.33 Expect = 6.86e-16 / Id = 31.75 Expect = 1.89e-15 / Id = 38.89 Expect = 5.06e-14 / Id = 30.29 Expect = 2.40e-13 / Id = 30.99 Sequence D8LG79_ECTSI A0A835YVJ1_9STRA A0A482SSL2_9ARCH A0A485KSR6_9STRA A0A024U202_9STRA W4GK44_9STRA A0A1V9YFZ7_9STRA A0A024U1I7_9STRA A0A7S3D416_9EUKA A0A067NAC6_9AGAM
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 345.9
Seed ortholog evalue 2.1e-92
Seed eggNOG ortholog 2880.D8LG79
KEGG ko ko:K06268,ko:K17610
KEGG Pathway ko04010,ko04020,ko04022,ko04114,ko04218,ko04310,ko04360,ko04370,ko04380,ko04650,ko04658,ko04659,ko04660,ko04662,ko04720,ko04724,ko04921,ko04922,ko04924,ko05010,ko05014,ko05031,ko05152,ko05166,ko05167,map04010,map04020,map04022,map04114,map04218,map04310,map04360,map04370,map04380,map04650,map04658,map04659,map04660,map04662,map04720,map04724,map04921,map04922,map04924,map05010,map05014,map05031,map05152,map05166,map05167
Hectar predicted targeting category other localisation
GOs GO:0003674,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009892,GO:0010563,GO:0010921,GO:0010923,GO:0016020,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0035303,GO:0035305,GO:0043086,GO:0043167,GO:0043169,GO:0044092,GO:0044464,GO:0045936,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051174,GO:0051336,GO:0051346,GO:0065007,GO:0065009,GO:0071944
EggNOG free text desc. Ca2 -binding protein (EF-Hand superfamily
EggNOG OGs COG5126@1,KOG0034@2759
COG Functional cat. DTZ
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko01009
Ec32 ortholog description EF-hand domain pair
Ec32 ortholog Ec-17_004050.1
Exons 9
Model size 1028
Cds size 978
Stop 1
Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815746.1150393-UTR-L-elsbetiae_contig1790:843..892 1622815746.1150393-UTR-L-elsbetiae_contig1790:843..892 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig1790 844..892 -
1691683075.6340427-UTR-L-elsbetiae_contig1790:843..892 1691683075.6340427-UTR-L-elsbetiae_contig1790:843..892 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig1790 844..892 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815746.125888-CDS-L-elsbetiae_contig1790:892..940 1622815746.125888-CDS-L-elsbetiae_contig1790:892..940 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 893..940 -
1691683075.6474564-CDS-L-elsbetiae_contig1790:892..940 1691683075.6474564-CDS-L-elsbetiae_contig1790:892..940 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 893..940 -
1622815746.1367722-CDS-L-elsbetiae_contig1790:1530..1611 1622815746.1367722-CDS-L-elsbetiae_contig1790:1530..1611 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 1531..1611 -
1691683075.6573179-CDS-L-elsbetiae_contig1790:1530..1611 1691683075.6573179-CDS-L-elsbetiae_contig1790:1530..1611 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 1531..1611 -
1622815746.1492014-CDS-L-elsbetiae_contig1790:2286..2396 1622815746.1492014-CDS-L-elsbetiae_contig1790:2286..2396 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 2287..2396 -
1691683075.6702409-CDS-L-elsbetiae_contig1790:2286..2396 1691683075.6702409-CDS-L-elsbetiae_contig1790:2286..2396 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 2287..2396 -
1622815746.168329-CDS-L-elsbetiae_contig1790:2933..2974 1622815746.168329-CDS-L-elsbetiae_contig1790:2933..2974 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 2934..2974 -
1691683075.6854599-CDS-L-elsbetiae_contig1790:2933..2974 1691683075.6854599-CDS-L-elsbetiae_contig1790:2933..2974 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 2934..2974 -
1622815746.1868753-CDS-L-elsbetiae_contig1790:3262..3285 1622815746.1868753-CDS-L-elsbetiae_contig1790:3262..3285 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 3263..3285 -
1691683075.6966646-CDS-L-elsbetiae_contig1790:3262..3285 1691683075.6966646-CDS-L-elsbetiae_contig1790:3262..3285 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 3263..3285 -
1622815746.1994128-CDS-L-elsbetiae_contig1790:3574..3651 1622815746.1994128-CDS-L-elsbetiae_contig1790:3574..3651 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 3575..3651 -
1691683075.7090518-CDS-L-elsbetiae_contig1790:3574..3651 1691683075.7090518-CDS-L-elsbetiae_contig1790:3574..3651 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 3575..3651 -
1622815746.2157276-CDS-L-elsbetiae_contig1790:4409..4505 1622815746.2157276-CDS-L-elsbetiae_contig1790:4409..4505 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 4410..4505 -
1691683075.7182558-CDS-L-elsbetiae_contig1790:4409..4505 1691683075.7182558-CDS-L-elsbetiae_contig1790:4409..4505 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 4410..4505 -
1622815746.2293863-CDS-L-elsbetiae_contig1790:4736..4918 1622815746.2293863-CDS-L-elsbetiae_contig1790:4736..4918 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 4737..4918 -
1691683075.7281456-CDS-L-elsbetiae_contig1790:4736..4918 1691683075.7281456-CDS-L-elsbetiae_contig1790:4736..4918 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 4737..4918 -
1622815746.2403696-CDS-L-elsbetiae_contig1790:5463..5783 1622815746.2403696-CDS-L-elsbetiae_contig1790:5463..5783 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 5464..5783 -
1691683075.736305-CDS-L-elsbetiae_contig1790:5463..5783 1691683075.736305-CDS-L-elsbetiae_contig1790:5463..5783 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1790 5464..5783 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1790.5111.1
>prot_L-elsbetiae_contig1790.5111.1 ID=prot_L-elsbetiae_contig1790.5111.1|Name=mRNA_L-elsbetiae_contig1790.5111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=326bp
FSAENDDSNIESVATSPRRGRNGLAAVQASGPLRIPSNRSQNTSDAPTTS RAYGGGLATVRASERFLQQSKNHNSSSRDTTRVRSFSESRGGLGADNAGK LMEEGISHVQGSKTLLGGKVEVGEGSSNHRNHDVGFLAALRTMIFGARDP ESDLSTETLEELHMVTGFTSKELRLTRSHFLALVKDPSFITREEFLEIPS VANNPLRERLLVCFGFDSMANLKFREFVEILSIFNNPTAQRDQKLRMAFT LVDIDGDGQVSKNDLVRYLELVTAAPEGVKIDLNAVAARIIEEGVSTPGV KSLSLADYIKIMGAADFADKLTIPL* back to top mRNA from alignment at L-elsbetiae_contig1790:844..5783-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1790.5111.1 ID=mRNA_L-elsbetiae_contig1790.5111.1|Name=mRNA_L-elsbetiae_contig1790.5111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4940bp|location=Sequence derived from alignment at L-elsbetiae_contig1790:844..5783- (Laminarionema elsbetiae ELsaHSoW15)TTTTCGGCCGAGAACGATGACAGCAATATCGAGAGCGTCGCGACGAGCCC
CAGGCGGGGCAGGAATGGCTTGGCTGCCGTGCAGGCAAGCGGACCTCTCA
GGATCCCCAGCAACCGCAGTCAAAACACGAGCGATGCGCCGACCACGAGT
AGGGCCTACGGCGGTGGCTTGGCCACTGTACGCGCGAGCGAGCGGTTTCT
CCAACAGAGCAAAAATCACAACAGCAGCAGTAGAGACACCACCCGGGTTC
GATCCTTCAGTGAGAGTCGTGGCGGCCTTGGTGCCGACAACGCCGGGAAG
CTGATGGAAGAAGGCATCAG GTATACTTGTCGTTCAAAGCACCTTTCTCT
GCACTTGTCGGGTGGGTGGCATTCGTTCGTTCTTCGGGGAACTTTGTGTC
CACAGGAGTTCACGGCAGGTCTCGACAGGGGTACTGTACCTACCTCCGAA
ATACGGCAAATCTCTGCCAGTTGTTGATGCCACAACAATTTGTTGCACGG
CACAGAGAGAGGCACATCCAACGGTGGTGTTCCCCTCGAACACTCAACCG
TTTGGTTCAACATTAATGGTGCTGCTGTTGGCAGATGCACTCGCAGCCTG
TGCTTGACTGTCGATGTTCATACAGCAGTAAAAAACATTCTCCGAGAAAC
GGTGTATCTAGATACATACCAAGAGTTTGTGTATCGTATAGTCTAAGGCG
TCCCCCACGATGCGCACGCGCGTCGCCTGTAGACTATATCTATCGTATGT
ACCAAAGCACATTTTGTCGCAGTCTGGCGTATTTCCTCGCATGGTCACGA
CCCTTTCCCACGTGCCACGCCGCTAAATCGAATCTGTATTTCCCCTTGCC
TTGGACCATCAACAGCCATGTTCAAGGCAGCAAGACGCTATTAGGCGGCA
AGGTCGAGGTTGGCGAGGGCTCGAGCAACCACCGGAATCACGATGTCGGC
TTCCTGGCAGCGCTGAGGACGATGATCTTTGGAGCGCGCGACCCAGAGTC
TGACCTGAGTACCGAGACCCTCGAGGAGCTGCACATGGTTACGGGTT GTG
AGTCAGCTCGTCCTCTGGCTGCATGTGTCGCCGCCAGCTTGCGTCGCCCC
TCCCGGCCTGCAAGCTCACGTTGCTCATGAGTCCCTCTTTCCACAAAATG
CAAGCGTGGAGAGGTTCTCCGACAAACGCGCCTGCAGCGCCAACCGCACG
CTGCCACCGTTTAGTAGTCGTCCAAACCCCCTCGCCGTGCGAATGAATGC
CAATGCTACGTTTGTTCTGTCCCCCCAGTCACGTCCAAGGAGCTGAGACT
CACCCGGTCCCACTTCCTTGCGCTTGTGAAAGATCCCAGTTTCATCACTC
GGGAGGAGTTTCTCGAGATACCAT GTGAGGCGGTAGCAGTAAGTCAGCCA
CAGACACGTATTGGCTGAGGAATCGAACGATAAAAAGCACGATGACCACC
AGACGGCCGATCGGCGTGGGCAGCACGCTATGTAGGCATGCATGCGGTAA
TTTGATATTTTTGCCCCAGCGACCCACTACTGCTGTGCATATGTAGAGAC
AGCCCCGCTCGGCGAACAGCCGGTCGGGTTCGCAGCGGTATGAACCGATT
CATTTTTCCACTCCAGGAAGGATGCGAGTTCTGAGAAGAGAGGAGTCTCG
GCGGTAAATGTGTGCTTCAACATACTTGCGTACGACGGGTTGGCGCAAAC
GCCCACTGCAGAAGACAGGGTTAGAAGTGCACGCACGGCTCTTCTTCCCT
TCTGCGCCTCGAATACCGAGAAAGCCGCAGCACCACCGAATAGCCCCGAC
GCATGGGATCCTCTGGCACACATTACAGTAGTAGTACCGTAGGTGACACA
AGATACCACACCCCCCGGACCGACTTTTAGAGCTCCATTACTCCGTAACG
AAGAGGGTGCCAGCGCTAAACGACACATTTTCAGACAGCCCTTGATGAGA
TATTTACAACGCCACCCTCTTTCGGCATGGCGCTCTTCTTGCTGGGGAGG
AATCGAGCTTTGAAAATATGTCCGGGGGGTGTGGTATCTTGTGTCACCTA
CGGTGCGGTAGTGTGGAATTGGCTGTGTACCGCTCAGCTCACGACGCCCT
GCAAATCTCCCCTTCCGCTCTTTCTTTCGCAGCTGTCGCCAATAACCCGC
TCAGAGAAAGGCTGCTCGTGTGCTTCGGCTTCGATTCGATGGCCAACTTG
AAGTTCAGG GTAAGCTCGCAACGCCGACGAATTCTTCCGCGCACGGACAG
TAGTAACTCCCTTGTTGTCGTTCGTGCAAAAGCAAATGGTTCGCCGATCG
TACCGCGGAGACAGAACCGACTTTGGGAGGAAGAGAAAATAAAGGCGGCG
AAACAAAGCACACCTTGTTGTTGTTGTGGCCAACCTGAACACTTGCCCCC
GCAACCCTCTGAACACTCGAACTTTCTCCGCTGTTCACACCGGAACCTGT
AATAACTTGTAATGACTGCGGGTGTTCTGGGCCTGCATCCTCTCGCAGGA
GTTCGTGGAGATCCTCTCAAT GTGAGCATGCTGTTTGGTACACGCGGCCC
GGTCTCGGAGAAAGGCGTCTGTGGCCGCGTCGCCGCCGAGATCAATCACC
CCAGAACCCTGCGTTTAGGGAGGAAAACGCTCTCCATTCAGCCGCCGGAA
GCTTGTGCGACACTCTCCGGTTGTGTTTTGCGCCACGGCCGAACGCCACA
AAGTGTCCAACTGTCGGGTTCCGTCCAGCCACACAGCGTAGTTCGTGCTC
TGGGCCATGACTTACTCGCTGCCCTTTTATGATCCTCGGTTCTCGGCCCT
CTCTCGCAGCTTCAACAATCCAACTGCTCAGAGGGACCAGAAGTTGAGAA
GTGAGTGCTAAACCCAAAGGAGAGGTAGTTATACGCGACGAGGTTTTGAC
ACATGTACCGTAACCCGCTAAGACCGCAAGTCCAAGTCCCGCCCGCGTAC
GCACATAGTATGAATCGGCACGTAGCACGTTCTCTCTCGCTTCTTGGGAG
CAGAGGGGGGAGCACGCCCCATGAGGATCGCTTATGTAGGCCGCGATCCG
GGCCGATGACATTGCCCATATCTGGAGGGTCAGTTTCCCGCTGGGCCGCC
TCAGCCTGCCCACCTGCGCTGCTGCTGCTGCTGCTGCTACAGACGTGTGT
CGAATCACAAACCAAAGAGCTTGCTGAAGCACTACCCTGGCATGGCTCAA
AACTGCTCGCTGCCTGCTGTCTATGGGTCTTCCAACCAACCGAGCAAGAC
CAATACACGAGTTACCCCCTCTCTTGCCCGATATCACGTGTATTTATGTG
CGCTACACTACTACTGTTGTTGTATTTATCACCATCGTACCATGGAGCAT
ACACTTAGCGACCCTTGCCCGTCCCATCTGTTTGCAGTGGCCTTCACCCT
TGTCGACATCGACGGCGACGGCCAGGTGTCCAAGAACGACCTCGTGCGGT
ACCTCGAGCTCGTCACGGCCGCCCCGGAGGGCGTGAAAATCGACCTG GTA
AGTTGGAGTGGTGCAATAGGGCTCAGGGGTGTCTCGTGCCCAGTGCTGAG
AAGCGTGGGGGAGGGTAGGAATCGACCCTTCGACGCGTGTACCTACTAGG
GGGGCGCGCCGGGGGGGAGCTTGAGCGGGCCTGGAGCTGCTTGGAATCCC
CCCCATGTGGAGGGGGAAGAAAGGGCTGCGCGAGGACACGCCTGATCGTA
ATTTTCTTCTTATCGTAGAGTTTGGTTGTGGTGGCGCGCCTGGTCATTCT
CTTTGCCTTGGTTTGTTTGTGACTCCGCGCCTAACCGGGGTCTTTCGGTT
TTGCTTGTGATTTTGCTTTTGGCGAAAGTTCTACAACAACAGTAGGTAAC
GTGGCACGTGTTTGTACGTTTCTACGGGAGCATCGTACGCCTCCCTTCGC
GTTGACACAGTCGGGGTTGAGCTGCAACAACAGCCTCACACCACGAGCGT
TTTTGTCGTGTTCTTGCTTCCAGCCCCAAACGCGAAAACCGTTTTGTTGC
TACTTAAAAAAAACGCGAAGAATGTTGCGCGAATTTCAAGCCGAAGCCCA
CCACAGGTCCACTTTTTGACTTTGGGCGCATTTTATGCAAAACTTGAAAC
TTAGAACCTGACCGCCTCGATTCCGCCACTTGCCCCCCCCGCCCCTCGTC
AAAACGTCCTCCCAACTTTTAGAACGCCGTAGCGGCGAGAATTATCGAGG
AAGGCGTGTCAACTCCTGGAGTCAAGTCGCTTTCCCTGGCGGACTACATC
AAG GTTCGTTTCGAATTGAGAAAATGTCGTTCGTCCACTTGGGGGGTAGT
AAGCAGCGGCAGAGAGTGGAGGGGGGGGTCTCTGGTGTTGCTGAATGATT
GCCTTTCAAATTCCAGGCAGTTCGGGCGGCATGACTTGCGAGACAGACAC
ACTCCAGGGTATTTCGGAATCCGCCACAGCGACTAAGGAGCCGCGACACA
GGGTACATATGTATATTGGCAACGGAAACAATATTACTACAGTTGTTTGG
GTATACAGGTCTGTAGTATAAGGCCCACAAACCCATTCGATGAAGGAAAC
CGCCGCACACCCTGTCCAGCTTTCTTTGCGGTCCACGCCTCTTTGTGTTG
TCTGGGGCCTTTCCCGAAGACGTATTTCTCAGCTTCTTGTATTATCAATT
ACCTACTTATCATTCATTCAAACAAATGTCGCCTAAACAACAGATACTGG
CAAAAGACTCATCCTTCTGATTTTCCGTTTTTTACCCGCATTTTTGGTGC
CCGTTTCCCTTCCCGTGTTGCTCCTCTGGCTCCCTCCACGACAAATCACC
CGGTCGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGTGATCAGATCATGG
GCGCGGCCGATTTCGCAGACAAACTGACCATTCCTTTGTGA CGGACGGCG
GATACGAGTAGTAGTCCAGAAATAACTGCATTGTGGAGGG back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1790:844..5783-
>mRNA_L-elsbetiae_contig1790.5111.1 ID=mRNA_L-elsbetiae_contig1790.5111.1|Name=mRNA_L-elsbetiae_contig1790.5111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1956bp|location=Sequence derived from alignment at L-elsbetiae_contig1790:844..5783- (Laminarionema elsbetiae ELsaHSoW15) TTTTCGGCCGAGAACGATGACAGCAATATCGAGAGCGTCGCGACGAGCCC CAGGCGGGGCAGGAATGGCTTGGCTGCCGTGCAGGCAAGCGGACCTCTCA GGATCCCCAGCAACCGCAGTCAAAACACGAGCGATGCGCCGACCACGAGT AGGGCCTACGGCGGTGGCTTGGCCACTGTACGCGCGAGCGAGCGGTTTCT CCAACAGAGCAAAAATCACAACAGCAGCAGTAGAGACACCACCCGGGTTC GATCCTTCAGTGAGAGTCGTGGCGGCCTTGGTGCCGACAACGCCGGGAAG CTGATGGAAGAAGGCATCAGTTTTCGGCCGAGAACGATGACAGCAATATC GAGAGCGTCGCGACGAGCCCCAGGCGGGGCAGGAATGGCTTGGCTGCCGT GCAGGCAAGCGGACCTCTCAGGATCCCCAGCAACCGCAGTCAAAACACGA GCGATGCGCCGACCACGAGTAGGGCCTACGGCGGTGGCTTGGCCACTGTA CGCGCGAGCGAGCGGTTTCTCCAACAGAGCAAAAATCACAACAGCAGCAG TAGAGACACCACCCGGGTTCGATCCTTCAGTGAGAGTCGTGGCGGCCTTG GTGCCGACAACGCCGGGAAGCTGATGGAAGAAGGCATCAGCCATGTTCAA GGCAGCAAGACGCTATTAGGCGGCAAGGTCGAGGTTGGCGAGGGCTCGAG CAACCACCGGAATCACGATGTCGGCTTCCTGGCAGCGCTGAGGACGATGA TCTTTGGAGCGCGCGACCCAGAGTCTGACCTGAGTACCGAGACCCTCGAG GAGCTGCACATGGTTACGGGTTCCATGTTCAAGGCAGCAAGACGCTATTA GGCGGCAAGGTCGAGGTTGGCGAGGGCTCGAGCAACCACCGGAATCACGA TGTCGGCTTCCTGGCAGCGCTGAGGACGATGATCTTTGGAGCGCGCGACC CAGAGTCTGACCTGAGTACCGAGACCCTCGAGGAGCTGCACATGGTTACG GGTTTCACGTCCAAGGAGCTGAGACTCACCCGGTCCCACTTCCTTGCGCT TGTGAAAGATCCCAGTTTCATCACTCGGGAGGAGTTTCTCGAGATACCAT TCACGTCCAAGGAGCTGAGACTCACCCGGTCCCACTTCCTTGCGCTTGTG AAAGATCCCAGTTTCATCACTCGGGAGGAGTTTCTCGAGATACCATCTGT CGCCAATAACCCGCTCAGAGAAAGGCTGCTCGTGTGCTTCGGCTTCGATT CGATGGCCAACTTGAAGTTCAGGCTGTCGCCAATAACCCGCTCAGAGAAA GGCTGCTCGTGTGCTTCGGCTTCGATTCGATGGCCAACTTGAAGTTCAGG GAGTTCGTGGAGATCCTCTCAATGAGTTCGTGGAGATCCTCTCAATCTTC AACAATCCAACTGCTCAGAGGGACCAGAAGTTGAGAACTTCAACAATCCA ACTGCTCAGAGGGACCAGAAGTTGAGAATGGCCTTCACCCTTGTCGACAT CGACGGCGACGGCCAGGTGTCCAAGAACGACCTCGTGCGGTACCTCGAGC TCGTCACGGCCGCCCCGGAGGGCGTGAAAATCGACCTGTGGCCTTCACCC TTGTCGACATCGACGGCGACGGCCAGGTGTCCAAGAACGACCTCGTGCGG TACCTCGAGCTCGTCACGGCCGCCCCGGAGGGCGTGAAAATCGACCTGAA CGCCGTAGCGGCGAGAATTATCGAGGAAGGCGTGTCAACTCCTGGAGTCA AGTCGCTTTCCCTGGCGGACTACATCAAGAACGCCGTAGCGGCGAGAATT ATCGAGGAAGGCGTGTCAACTCCTGGAGTCAAGTCGCTTTCCCTGGCGGA CTACATCAAGATCATGGGCGCGGCCGATTTCGCAGACAAACTGACCATTC CTTTGTGAATCATGGGCGCGGCCGATTTCGCAGACAAACTGACCATTCCT TTGTGA back to top